Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGT > NC_000913/1666742‑1666926
|
AGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTG > SRR4302540.9580972/1‑94 (MQ=60)
AGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTG < SRR4302540.4916886/94‑1 (MQ=60)
AGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTG > SRR4302540.1994183/1‑94 (MQ=60)
AGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCG > SRR4302540.7329923/1‑94 (MQ=60)
AGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCG < SRR4302540.8604069/94‑1 (MQ=60)
GATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGG > SRR4302540.6041845/1‑94 (MQ=60)
ATTAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGC > SRR4302540.6298280/1‑94 (MQ=60)
ATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTTAGCAATTGGC < SRR4302540.733634/94‑1 (MQ=60)
TGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCA < SRR4302540.105839/94‑1 (MQ=60)
GAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCAC > SRR4302540.1337341/1‑94 (MQ=60)
GAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCAC < SRR4302540.4014724/94‑1 (MQ=60)
GAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCAC < SRR4302540.5342981/94‑1 (MQ=60)
GAATACGAAAGTTACGCGCAGCCGGACCTTGTTGATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCAC < SRR4302540.5342980/94‑1 (MQ=60)
AATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACC < SRR4302540.1220198/94‑1 (MQ=60)
AATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACC < SRR4302540.9356569/94‑1 (MQ=60)
ATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCC > SRR4302540.8631594/1‑94 (MQ=60)
ACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAG < SRR4302540.4060628/94‑1 (MQ=60)
CGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGC < SRR4302540.360603/94‑1 (MQ=60)
CGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGC > SRR4302540.4812376/1‑94 (MQ=60)
CGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGC > SRR4302540.2318996/1‑94 (MQ=60)
GAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCG < SRR4302540.7377004/94‑1 (MQ=60)
GAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCG > SRR4302540.7276686/1‑94 (MQ=60)
GAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCG < SRR4302540.5679480/94‑1 (MQ=60)
AAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACAACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGC > SRR4302540.3137345/1‑94 (MQ=60)
AGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCAT < SRR4302540.9481881/94‑1 (MQ=60)
AGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCAT > SRR4302540.8344519/1‑94 (MQ=60)
TTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTT < SRR4302540.427869/94‑1 (MQ=60)
TACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTC > SRR4302540.5385549/1‑94 (MQ=60)
TACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTC > SRR4302540.3953750/1‑94 (MQ=60)
TACGCGCAGCCGGACTTTGTTCATGATGTGTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTC < SRR4302540.1327069/94‑1 (MQ=60)
ACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCG < SRR4302540.9253884/94‑1 (MQ=60)
GCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTT < SRR4302540.3135141/94‑1 (MQ=60)
CGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTG < SRR4302540.2031180/94‑1 (MQ=60)
CGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTG < SRR4302540.9172613/94‑1 (MQ=60)
GCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGA < SRR4302540.257671/94‑1 (MQ=60)
GCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGA < SRR4302540.1950179/94‑1 (MQ=60)
GCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGA > SRR4302540.7475666/1‑94 (MQ=60)
AGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGC < SRR4302540.8181854/94‑1 (MQ=60)
GCCGGCCTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCT > SRR4302540.7525103/1‑94 (MQ=60)
CCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTG < SRR4302540.2897575/94‑1 (MQ=60)
CCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTG > SRR4302540.3050168/1‑94 (MQ=60)
CGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGA < SRR4302540.4523028/94‑1 (MQ=60)
CGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGA < SRR4302540.9239342/94‑1 (MQ=60)
CGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGA > SRR4302540.4662504/1‑94 (MQ=60)
GGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAA < SRR4302540.7344454/94‑1 (MQ=60)
GGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAA > SRR4302540.2888403/1‑94 (MQ=60)
GGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAA < SRR4302540.8149581/94‑1 (MQ=60)
GGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAA < SRR4302540.7944400/94‑1 (MQ=60)
GACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAAC < SRR4302540.4996979/94‑1 (MQ=60)
ACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACA > SRR4302540.10131257/1‑94 (MQ=60)
ACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACA < SRR4302540.7114935/94‑1 (MQ=60)
CTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACAC > SRR4302540.2109710/1‑94 (MQ=60)
CTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACAC > SRR4302540.3531705/1‑94 (MQ=60)
TGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAATCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTCCGTTCAGCTGAACACGAT > SRR4302540.5361506/1‑94 (MQ=60)
TGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTT < SRR4302540.7337477/94‑1 (MQ=60)
GTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTT < SRR4302540.576234/94‑1 (MQ=60)
TTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTA < SRR4302540.6444984/94‑1 (MQ=60)
TCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAA < SRR4302540.1484507/94‑1 (MQ=60)
TCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAA > SRR4302540.741456/1‑94 (MQ=60)
CATGATGTTGCGGCCAGGCCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAA < SRR4302540.7563796/94‑1 (MQ=60)
ATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAAT > SRR4302540.7124048/1‑94 (MQ=60)
ATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAAT > SRR4302540.2703549/1‑94 (MQ=60)
ATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAAT < SRR4302540.5033150/94‑1 (MQ=60)
ATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAAT < SRR4302540.5033151/94‑1 (MQ=60)
TGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATG < SRR4302540.3500357/94‑1 (MQ=60)
TGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATG < SRR4302540.8073674/94‑1 (MQ=60)
TGATGTTTCGGCCAGACCAACCACATGTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATG < SRR4302540.8073675/94‑1 (MQ=60)
GATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGA > SRR4302540.2376053/1‑94 (MQ=60)
ATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGAC < SRR4302540.6007109/94‑1 (MQ=60)
ATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGAC < SRR4302540.6007108/94‑1 (MQ=60)
ATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGAC > SRR4302540.2715191/1‑94 (MQ=60)
TTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCA < SRR4302540.2847691/94‑1 (MQ=60)
TTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAG < SRR4302540.974153/94‑1 (MQ=60)
TTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAG < SRR4302540.1155726/94‑1 (MQ=60)
TCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGG < SRR4302540.6973364/94‑1 (MQ=60)
ggccagacccaccaccgttcagaaaccggctcctgctgagccgTCGGCGCCCAGCGCCTTTCGTTGAGCTGCACACGTTTAAATGACGCAGGCA < SRR4302540.8570795/51‑1 (MQ=47)
GGCCAGACCCAGCACATTTCAGAAACCCCATTCTCTTCAGCCATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCA < SRR4302540.8570796/94‑1 (MQ=60)
GGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCA > SRR4302540.7382156/1‑94 (MQ=60)
GGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCA < SRR4302540.1657012/94‑1 (MQ=60)
CCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAA > SRR4302540.8670315/1‑94 (MQ=60)
CAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAA < SRR4302540.1842435/94‑1 (MQ=60)
AGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAAT > SRR4302540.5443776/1‑94 (MQ=60)
AGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAAT < SRR4302540.3566059/94‑1 (MQ=60)
GACCAACCACATTTCAGCAGCCGCCTCCTCTTCTGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATT < SRR4302540.9095938/94‑1 (MQ=60)
GACCAACCACATTTCAGCACCCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATT < SRR4302540.9095939/94‑1 (MQ=60)
ACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTG < SRR4302540.2214522/94‑1 (MQ=60)
ACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTG < SRR4302540.4116819/94‑1 (MQ=60)
CCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGA < SRR4302540.7501678/94‑1 (MQ=60)
CCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGA > SRR4302540.6032224/1‑94 (MQ=60)
ACCCCATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAAC < SRR4302540.3482150/94‑1 (MQ=60)
ACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAAC < SRR4302540.8352285/94‑1 (MQ=60)
ACCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAAC < SRR4302540.1161745/94‑1 (MQ=60)
ACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAAC < SRR4302540.955232/94‑1 (MQ=60)
CCACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACA < SRR4302540.4503080/94‑1 (MQ=60)
CCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACA < SRR4302540.4392901/94‑1 (MQ=60)
CACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACAC < SRR4302540.9207020/94‑1 (MQ=60)
CACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACAC < SRR4302540.9207022/94‑1 (MQ=60)
CACATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACAC < SRR4302540.3322964/94‑1 (MQ=60)
CACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACAC < SRR4302540.4118075/94‑1 (MQ=60)
CACATGTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACAC < SRR4302540.5264428/94‑1 (MQ=60)
CACAGTTCAGAAGCCGCATCCTCTTCAGCAAGTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACAC < SRR4302540.9207023/94‑1 (MQ=60)
ACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACC < SRR4302540.1630178/94‑1 (MQ=60)
CATTTCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCA > SRR4302540.3429889/1‑94 (MQ=60)
CATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCC < SRR4302540.3309817/94‑1 (MQ=60)
CATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCC < SRR4302540.4541754/94‑1 (MQ=60)
ATTTCAGAACCCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCA < SRR4302540.801372/94‑1 (MQ=60)
ATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCA > SRR4302540.5800935/1‑94 (MQ=60)
TTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAG < SRR4302540.4528212/94‑1 (MQ=60)
TTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAG < SRR4302540.8858867/94‑1 (MQ=60)
TCAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAACGACGCAGGCAAAATTGAAACACCCAGAC < SRR4302540.6459573/94‑1 (MQ=60)
TCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGAC > SRR4302540.3839437/1‑94 (MQ=60)
CAGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACC < SRR4302540.5938359/94‑1 (MQ=60)
CAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACC < SRR4302540.9711417/94‑1 (MQ=60)
AGAAACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCG > SRR4302540.1749831/1‑94 (MQ=60)
GAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGCCGCAGGCAAAATTGAAACACCCAGACCGG < SRR4302540.3924968/94‑1 (MQ=60)
AACCGCATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCG < SRR4302540.1661171/94‑1 (MQ=60)
ATCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACC > SRR4302540.2660254/1‑94 (MQ=60)
TCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCA < SRR4302540.9205743/94‑1 (MQ=60)
TCCTCTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCA < SRR4302540.3683145/94‑1 (MQ=60)
TCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCA < SRR4302540.9500088/94‑1 (MQ=60)
TCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACAA > SRR4302540.2692436/1‑94 (MQ=60)
CTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACAGGCGGAAACCAGA > SRR4302540.6471781/1‑94 (MQ=60)
CTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACC < SRR4302540.1669863/94‑1 (MQ=60)
CTTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACC < SRR4302540.757341/94‑1 (MQ=60)
CTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACC < SRR4302540.883181/94‑1 (MQ=60)
CTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACC < SRR4302540.5635338/94‑1 (MQ=60)
TTCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCG > SRR4302540.2488055/1‑94 (MQ=60)
TTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCG > SRR4302540.4526650/1‑94 (MQ=60)
TCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGA > SRR4302540.4033478/1‑94 (MQ=60)
TCAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGA > SRR4302540.8227489/1‑94 (MQ=60)
CAGCAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGAT < SRR4302540.193258/94‑1 (MQ=60)
CAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGAT < SRR4302540.5642985/94‑1 (MQ=60)
CAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTATATGACGCAGGCAAAATTGAAACCCCCAGACCGGCGGAAACCAGACCGATGAT < SRR4302540.2657600/94‑1 (MQ=60)
CAATTGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGAT < SRR4302540.4427418/94‑1 (MQ=60)
CAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGAT < SRR4302540.6267321/94‑1 (MQ=60)
ATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGG < SRR4302540.3596748/94‑1 (MQ=60)
ATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGG > SRR4302540.4534259/1‑94 (MQ=60)
ATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGG < SRR4302540.2940884/94‑1 (MQ=60)
TTGGCACCCAGCGCATTTCGTTGAGCGGAACACGTTTAAATGACGTAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGT < SRR4302540.6685959/94‑1 (MQ=60)
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AGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGT > NC_000913/1666742‑1666926
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
