Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAAACGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCG > NC_000913/1803197‑1803381
|
TAAGCGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGA < SRR4302540.175583/94‑1 (MQ=60)
TAAACGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGG > SRR4302540.405602/1‑94 (MQ=60)
TAAACGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGG > SRR4302540.6294965/1‑94 (MQ=60)
TAAACGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGA > SRR4302540.1099608/1‑94 (MQ=60)
TAAACGCTTTGATAAAAAACAATGGGAGATGGTGGGGGTGCTCTTGGCAATCTGCTGCGCTATGGTGTTGCTACGTTGGGCAGCACTGCTTTGG > SRR4302540.1112373/1‑94 (MQ=44)
AAACGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAG > SRR4302540.8703896/1‑94 (MQ=60)
AACGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGG > SRR4302540.5508354/1‑94 (MQ=60)
CGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCT > SRR4302540.7629211/1‑94 (MQ=60)
CGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCT < SRR4302540.5552525/94‑1 (MQ=60)
GCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTG > SRR4302540.66589/1‑94 (MQ=60)
CTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGA > SRR4302540.5181197/1‑94 (MQ=60)
CTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGA > SRR4302540.760122/1‑94 (MQ=60)
TTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAG < SRR4302540.1604153/94‑1 (MQ=60)
TTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGC < SRR4302540.1602265/94‑1 (MQ=60)
TGATAACAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCA < SRR4302540.2071788/94‑1 (MQ=60)
TGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCA > SRR4302540.4263322/1‑94 (MQ=60)
TGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCA > SRR4302540.4263321/1‑94 (MQ=60)
GATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCACTGATTTGGGGCTGAGCAG > SRR4302540.261680/1‑94 (MQ=60)
GATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAG < SRR4302540.6164779/94‑1 (MQ=60)
ATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGT < SRR4302540.5039513/94‑1 (MQ=60)
TAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTG > SRR4302540.1729824/1‑94 (MQ=60)
AAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGA < SRR4302540.7478063/94‑1 (MQ=60)
AAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAA > SRR4302540.8315495/1‑94 (MQ=60)
AAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAA > SRR4302540.5486438/1‑94 (MQ=60)
AAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAA < SRR4302540.6374996/94‑1 (MQ=60)
CACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACG > SRR4302540.2618969/1‑94 (MQ=60)
CACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACG > SRR4302540.2225548/1‑94 (MQ=60)
CACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACG > SRR4302540.9176354/1‑94 (MQ=60)
CCTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGA < SRR4302540.665273/94‑1 (MQ=60)
ACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGA < SRR4302540.9801400/94‑1 (MQ=60)
CTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAA > SRR4302540.4028749/1‑94 (MQ=60)
CTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAA > SRR4302540.9725116/1‑94 (MQ=60)
TGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAG < SRR4302540.3163130/94‑1 (MQ=60)
TGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAG < SRR4302540.990263/94‑1 (MQ=60)
GAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGAC < SRR4302540.9229609/94‑1 (MQ=60)
GAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGAC < SRR4302540.9229608/94‑1 (MQ=60)
GAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGAC < SRR4302540.503779/94‑1 (MQ=60)
GAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGAC < SRR4302540.7939046/94‑1 (MQ=60)
GAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACA < SRR4302540.353870/94‑1 (MQ=60)
AAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACA > SRR4302540.2060165/1‑94 (MQ=60)
AAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACA < SRR4302540.9599712/94‑1 (MQ=60)
AAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACA < SRR4302540.4666556/94‑1 (MQ=60)
AAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACA < SRR4302540.2606085/94‑1 (MQ=60)
AAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACA < SRR4302540.6320531/94‑1 (MQ=60)
AGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAG < SRR4302540.9452137/94‑1 (MQ=60)
AGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAG > SRR4302540.2646237/1‑94 (MQ=60)
AGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAG < SRR4302540.9785880/94‑1 (MQ=60)
GATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGC < SRR4302540.6006908/94‑1 (MQ=60)
GATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGC > SRR4302540.8620544/1‑94 (MQ=60)
GATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAAAGAAGACAGC > SRR4302540.8620543/1‑94 (MQ=60)
ATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCC > SRR4302540.3342674/1‑94 (MQ=60)
TGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCA < SRR4302540.467813/94‑1 (MQ=60)
TGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCA > SRR4302540.6258942/1‑94 (MQ=60)
GTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGA < SRR4302540.1402844/94‑1 (MQ=60)
TGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGAC < SRR4302540.250835/94‑1 (MQ=60)
GGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACC < SRR4302540.516467/94‑1 (MQ=60)
GGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACC > SRR4302540.1610819/1‑94 (MQ=60)
GGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACC < SRR4302540.1984176/94‑1 (MQ=60)
GGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACC < SRR4302540.7157815/94‑1 (MQ=60)
GGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACC > SRR4302540.2466635/1‑94 (MQ=60)
GTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCG < SRR4302540.1450324/94‑1 (MQ=60)
GTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCG > SRR4302540.8792499/1‑94 (MQ=60)
GGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCA > SRR4302540.262093/1‑94 (MQ=60)
GGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCA < SRR4302540.5456128/94‑1 (MQ=60)
GGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTAGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCA > SRR4302540.7636701/1‑94 (MQ=60)
GGTGCTACTGGCAATCTGTGGCGCTATGTTGGTGCTACGCTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACATCCAGACCGCA > SRR4302540.229429/1‑94 (MQ=60)
GTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCAT < SRR4302540.9494617/94‑1 (MQ=60)
GTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCAT > SRR4302540.5960998/1‑94 (MQ=60)
GCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAA < SRR4302540.9281383/94‑1 (MQ=60)
GCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAA < SRR4302540.9922013/94‑1 (MQ=60)
TACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACA < SRR4302540.2451349/94‑1 (MQ=60)
TACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACA < SRR4302540.520972/94‑1 (MQ=60)
ctcttccgctctcgcgcttgTGTTGTTGCTACGTTGGGCAGCACTGATTTGAGGCTGAGCAGTGCCAAACGAAGACAGCCGGGCCGCATACCAC < SRR4302540.7807851/74‑1 (MQ=55)
ACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACAC < SRR4302540.9549337/94‑1 (MQ=60)
ACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACAC < SRR4302540.6438222/94‑1 (MQ=60)
ACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACAC < SRR4302540.1148398/94‑1 (MQ=60)
CTGGCAATCTGTGGCGCTATGTTGTTGCTAGCTTGGACAGCAATAATTTGGGGCTGAGCAGTGACAAACCAAGACAGCCAGACCGCATAACACG < SRR4302540.9475665/94‑1 (MQ=60)
CTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACG < SRR4302540.672661/94‑1 (MQ=60)
TGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGG > SRR4302540.1977163/1‑94 (MQ=60)
GGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGT < SRR4302540.1301734/94‑1 (MQ=60)
GGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGC > SRR4302540.9716210/1‑94 (MQ=60)
GCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTC < SRR4302540.1022700/94‑1 (MQ=60)
CAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCC < SRR4302540.1284104/94‑1 (MQ=60)
CAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCC < SRR4302540.9227712/94‑1 (MQ=60)
AATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCG < SRR4302540.2305377/94‑1 (MQ=60)
AATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCG < SRR4302540.7052241/94‑1 (MQ=60)
AATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCG < SRR4302540.9237836/94‑1 (MQ=60)
AATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCG < SRR4302540.2617220/94‑1 (MQ=60)
ATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGG > SRR4302540.8263077/1‑94 (MQ=60)
TCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGC < SRR4302540.8735619/94‑1 (MQ=60)
TGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAG < SRR4302540.6726443/94‑1 (MQ=60)
TGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGAT < SRR4302540.6578645/94‑1 (MQ=60)
TGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGAT < SRR4302540.1124486/94‑1 (MQ=60)
GGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATA < SRR4302540.4954363/94‑1 (MQ=60)
GCGCTATGTTGTTGCTCCGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGCCCGCATACCACGGTCCGGCAGATAA < SRR4302540.215601/94‑1 (MQ=60)
GCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAA < SRR4302540.9891162/94‑1 (MQ=60)
CGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAAT < SRR4302540.2617226/94‑1 (MQ=60)
CGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAAT > SRR4302540.2744904/1‑94 (MQ=60)
GCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATT > SRR4302540.6083857/1‑94 (MQ=60)
GTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTT < SRR4302540.5234215/94‑1 (MQ=60)
TATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTT > SRR4302540.3421979/1‑94 (MQ=60)
TATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTT > SRR4302540.1578217/1‑94 (MQ=60)
TATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTT > SRR4302540.5586854/1‑94 (MQ=60)
ATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTA > SRR4302540.5831129/1‑94 (MQ=60)
ATGTTGTTGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTA > SRR4302540.4888177/1‑94 (MQ=60)
TTGTTGCTACGTTGGGCAGCAATGATTTGGGGttggccatggccaaacgaggacagccaaacgccaaaacacggccgggcgataaattttaaag > SRR4302540.894868/1‑32 (MQ=60)
TTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACAT < SRR4302540.8876589/94‑1 (MQ=60)
TTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACAT < SRR4302540.685383/94‑1 (MQ=60)
TTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACAT < SRR4302540.4263834/94‑1 (MQ=60)
TTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCT < SRR4302540.5057073/94‑1 (MQ=60)
TTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCT < SRR4302540.8888088/94‑1 (MQ=60)
TGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTG > SRR4302540.6559608/1‑94 (MQ=60)
TGCTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTG > SRR4302540.3840345/1‑94 (MQ=60)
GCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGT < SRR4302540.9316898/94‑1 (MQ=60)
CTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTA > SRR4302540.1780428/1‑94 (MQ=60)
CTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTA > SRR4302540.1780430/1‑94 (MQ=60)
CTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTA < SRR4302540.8713812/94‑1 (MQ=60)
CTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTA < SRR4302540.6186487/94‑1 (MQ=60)
CTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTA < SRR4302540.7420179/94‑1 (MQ=60)
CTACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTA < SRR4302540.7872479/94‑1 (MQ=60)
ACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGC > SRR4302540.7391468/1‑94 (MQ=60)
ACGTTGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGC < SRR4302540.358973/94‑1 (MQ=60)
GTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCC > SRR4302540.2235441/1‑94 (MQ=60)
TTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCA < SRR4302540.4183437/94‑1 (MQ=60)
TTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCA < SRR4302540.2408481/94‑1 (MQ=60)
TGGGCAGCACTGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAG < SRR4302540.1384327/94‑1 (MQ=60)
TGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAG > SRR4302540.5865044/1‑94 (MQ=60)
TGGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAG < SRR4302540.8151565/94‑1 (MQ=60)
TGGGAAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAG < SRR4302540.5172535/94‑1 (MQ=60)
GGGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGC > SRR4302540.5485460/1‑94 (MQ=60)
GGCAGTAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCG < SRR4302540.3277949/94‑1 (MQ=60)
GGCAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCG < SRR4302540.10162776/94‑1 (MQ=60)
GGCAGCAATGATTTGAGCCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCG < SRR4302540.5295796/94‑1 (MQ=60)
CAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGAT > SRR4302540.4417467/1‑94 (MQ=60)
CAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGAT > SRR4302540.4501253/1‑94 (MQ=60)
CAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACAGTCCGGCAGATAATTTTACATGCTGTAttcccgcgat > SRR4302540.4417468/1‑84 (MQ=60)
CAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGAT > SRR4302540.3541447/1‑94 (MQ=60)
CAGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGAT > SRR4302540.945738/1‑94 (MQ=60)
AGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATA > SRR4302540.1330723/1‑94 (MQ=60)
AGCAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATA < SRR4302540.5246369/94‑1 (MQ=60)
GCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAA > SRR4302540.9961987/1‑94 (MQ=60)
GCAACGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGACCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAA < SRR4302540.7937496/94‑1 (MQ=60)
CAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAG > SRR4302540.9934010/1‑94 (MQ=60)
CAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAG < SRR4302540.6189300/94‑1 (MQ=60)
CAATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAG < SRR4302540.3489404/94‑1 (MQ=60)
AATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGG < SRR4302540.8230636/94‑1 (MQ=60)
AATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGG < SRR4302540.8230637/94‑1 (MQ=60)
ATGATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGT < SRR4302540.3796418/94‑1 (MQ=60)
TGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTT < SRR4302540.5740289/94‑1 (MQ=60)
GATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGtttt > SRR4302540.8606986/1‑90 (MQ=60)
GATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTG > SRR4302540.7497801/1‑94 (MQ=60)
GATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTG < SRR4302540.2309524/94‑1 (MQ=60)
ATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGT < SRR4302540.6981955/94‑1 (MQ=60)
ATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGT < SRR4302540.6981957/94‑1 (MQ=60)
ATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGT < SRR4302540.291508/94‑1 (MQ=60)
ATTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGT < SRR4302540.3840059/94‑1 (MQ=60)
TTTGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTC < SRR4302540.6596036/94‑1 (MQ=60)
TTGAGGCTGAGCAGTCACAAACGAATACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCC < SRR4302540.9186574/94‑1 (MQ=60)
TGAGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCG < SRR4302540.3412553/94‑1 (MQ=60)
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TAAACGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCG > NC_000913/1803197‑1803381
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
