Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGGCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGCATGA > NC_000913/2030614‑2030799
|
GGGCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CC > SRR4302540.5259740/1‑94 (MQ=60)
GGGCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CA > SRR4302540.2089832/1‑94 (MQ=60)
GGCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAG < SRR4302540.113424/94‑1 (MQ=60)
GGCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAG < SRR4302540.6482128/94‑1 (MQ=60)
GCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGG < SRR4302540.7530549/94‑1 (MQ=60)
GGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGG < SRR4302540.9302147/94‑1 (MQ=60)
CGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGG < SRR4302540.168814/94‑1 (MQ=60)
CGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGG > SRR4302540.2271787/1‑94 (MQ=60)
CGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGG > SRR4302540.4042904/1‑94 (MQ=60)
CGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGG < SRR4302540.6786859/94‑1 (MQ=60)
CGATGCTGTGCGAACGGATCTTCACCATAAAACAACGCCCCGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGCACAAT‑CG‑‑C‑CCC‑CAGCG > SRR4302540.4042903/1‑94 (MQ=60)
GATGCTGTGCGAACGGATCTTCACCATCAAATAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGG > SRR4302540.388311/1‑94 (MQ=60)
GATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGG > SRR4302540.1584048/1‑94 (MQ=60)
GATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGC > SRR4302540.2748537/1‑94 (MQ=60)
GATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGC > SRR4302540.7114507/1‑94 (MQ=60)
ATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGC > SRR4302540.4099968/1‑94 (MQ=60)
GTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCA > SRR4302540.6375625/1‑94 (MQ=60)
GTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCA < SRR4302540.4261767/94‑1 (MQ=60)
CGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCC > SRR4302540.5504740/1‑94 (MQ=60)
CGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCC < SRR4302540.4650424/94‑1 (MQ=60)
CGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑CACCC‑CAGGGCTTCCAGCC > SRR4302540.1534617/1‑94 (MQ=60)
GAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGA < SRR4302540.5426246/94‑1 (MQ=60)
AACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGAC > SRR4302540.7259449/1‑94 (MQ=60)
ACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGAT > SRR4302540.5070105/1‑94 (MQ=60)
ACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGAT > SRR4302540.3289419/1‑94 (MQ=60)
GGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCC < SRR4302540.572440/94‑1 (MQ=60)
GGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCCGCCGATCCG > SRR4302540.7993504/1‑94 (MQ=60)
GGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCG < SRR4302540.6319674/94‑1 (MQ=60)
GATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGC > SRR4302540.4782171/1‑94 (MQ=60)
GATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGACAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGC > SRR4302540.9609460/1‑94 (MQ=60)
CTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCAT > SRR4302540.3335722/1‑94 (MQ=60)
CTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATC > SRR4302540.5012005/1‑94 (MQ=60)
TTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATC < SRR4302540.6179795/94‑1 (MQ=60)
TTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCC < SRR4302540.9425291/94‑1 (MQ=60)
TTCACCATCAAACAGCGCCACGCCCAATGCCCCGGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCC < SRR4302540.991027/94‑1 (MQ=60)
CACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCT < SRR4302540.626057/94‑1 (MQ=60)
CACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTG < SRR4302540.7542064/94‑1 (MQ=60)
ACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGG > SRR4302540.1612473/1‑94 (MQ=60)
CCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGA > SRR4302540.6130537/1‑94 (MQ=60)
CATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACCCGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGAC < SRR4302540.9098602/94‑1 (MQ=60)
CATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGA < SRR4302540.9673412/94‑1 (MQ=60)
CATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGAC > SRR4302540.9346124/1‑94 (MQ=60)
CAACAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGAC < SRR4302540.7532091/94‑1 (MQ=60)
AAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAAT > SRR4302540.7315514/1‑94 (MQ=60)
AAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CC‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATT < SRR4302540.5415603/94‑1 (MQ=60)
AACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATT > SRR4302540.564277/1‑94 (MQ=60)
AACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTT < SRR4302540.7755754/94‑1 (MQ=60)
ACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTT > SRR4302540.9693376/1‑94 (MQ=60)
CAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTA > SRR4302540.10064215/1‑94 (MQ=60)
GCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAG < SRR4302540.170513/94‑1 (MQ=60)
CGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCT > SRR4302540.9201133/1‑94 (MQ=60)
CGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCT < SRR4302540.4628600/94‑1 (MQ=60)
CGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAA‑CGC‑C‑CCC‑CAGGGCATCCAGCCGATCCGCAaccgggacaagactagc > SRR4302540.7815089/1‑77 (MQ=60)
CCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTT < SRR4302540.9865982/94‑1 (MQ=60)
CCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTC > SRR4302540.3068220/1‑94 (MQ=60)
CACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTC < SRR4302540.8711329/94‑1 (MQ=60)
CCGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGTTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCC < SRR4302540.7970754/94‑1 (MQ=60)
ACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCG > SRR4302540.4380697/1‑94 (MQ=60)
CGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCG > SRR4302540.547198/1‑94 (MQ=60)
CCCCAATCCCCCTGAAACGGCAAACCCCCGCGCCAGCCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGT < SRR4302540.2018648/94‑1 (MQ=60)
CCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTT > SRR4302540.8814159/1‑94 (MQ=60)
CCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTT > SRR4302540.8814160/1‑94 (MQ=60)
CCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTG > SRR4302540.4308845/1‑94 (MQ=60)
CCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTG < SRR4302540.1879387/94‑1 (MQ=60)
CCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGT < SRR4302540.6649735/94‑1 (MQ=60)
CCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGT < SRR4302540.8272296/94‑1 (MQ=60)
CAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACACTTTTAGCTTCCGTTGT > SRR4302540.218810/1‑94 (MQ=60)
CAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGT < SRR4302540.9847221/94‑1 (MQ=60)
CAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGT > SRR4302540.6453788/1‑94 (MQ=60)
CAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGT < SRR4302540.9573461/94‑1 (MQ=60)
AATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTA < SRR4302540.3536615/94‑1 (MQ=60)
TGCCCCTGAAACGGCAAACACGCGCGCCCGGCCAAT‑CG‑‑C‑CCT‑CAGGGCTTCaggccactccggatcctgaccaattttagctgtcggtctgcag > SRR4302540.10017150/1‑51 (MQ=60)
GCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAG > SRR4302540.7671326/1‑94 (MQ=60)
GCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAG < SRR4302540.8518112/94‑1 (MQ=60)
GCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGACTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGG < SRR4302540.7544153/94‑1 (MQ=60)
CCCCTGAAACGGCAAACCCGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGG < SRR4302540.2731209/94‑1 (MQ=60)
CCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGCCC‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAG < SRR4302540.5106074/94‑1 (MQ=60)
CCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGG < SRR4302540.9118864/94‑1 (MQ=60)
CCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGG > SRR4302540.7183967/1‑94 (MQ=60)
CCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGG < SRR4302540.773546/94‑1 (MQ=60)
CCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGG > SRR4302540.3876994/1‑94 (MQ=60)
CCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCAGCTGTTAAGGGGG > SRR4302540.453982/1‑94 (MQ=60)
CTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGG > SRR4302540.9585862/1‑94 (MQ=60)
CTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGG > SRR4302540.6527955/1‑94 (MQ=60)
CTAAAACGGCAAACCCGCCCGCCAGCCCAAT‑CG‑‑C‑CCCGCAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGG < SRR4302540.3970996/94‑1 (MQ=60)
cgaaacggaaaccgCGCGCTCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCG < SRR4302540.2362220/80‑1 (MQ=60)
TGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGG > SRR4302540.1922423/1‑94 (MQ=60)
TGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGC > SRR4302540.2299626/1‑94 (MQ=60)
TGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGC < SRR4302540.219113/94‑1 (MQ=60)
TGAAACGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGC > SRR4302540.1901218/1‑94 (MQ=60)
GAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACGATTTTAGCTTCCGTTGTTAAGGGGGCGA > SRR4302540.2285379/1‑94 (MQ=60)
CGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTT < SRR4302540.4471737/94‑1 (MQ=60)
CGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTT < SRR4302540.6016294/94‑1 (MQ=60)
CGGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTT < SRR4302540.3827265/94‑1 (MQ=60)
CGGCAAAAACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTT < SRR4302540.4471736/94‑1 (MQ=60)
GGCAAACACGCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACCATTTTAGCTTCCGTTGTTAAGGGGGCGATTTG > SRR4302540.3365086/1‑94 (MQ=60)
CGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGC > SRR4302540.3449361/1‑94 (MQ=60)
CAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGC > SRR4302540.9566391/1‑94 (MQ=60)
aaagagccgctcaAGGCCAAT‑CC‑‑C‑CCC‑CAGGCCCTCAAACCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCG < SRR4302540.5645216/81‑1 (MQ=60)
AACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGC > SRR4302540.8749572/1‑94 (MQ=60)
CGCGCGCCAGGCCAAT‑CC‑‑C‑CCC‑CAGGTCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAA < SRR4302540.3564976/94‑1 (MQ=60)
GCGCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAA > SRR4302540.4690132/1‑94 (MQ=60)
CCGCGCCAGGCCAATCCC‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAA < SRR4302540.7270989/94‑1 (MQ=60)
CGCGCCAGGCCAAT‑CC‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAAC < SRR4302540.7822665/94‑1 (MQ=60)
GCGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATGTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAAC < SRR4302540.4090632/94‑1 (MQ=60)
CGCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACT > SRR4302540.8990416/1‑94 (MQ=60)
GCCAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTG > SRR4302540.1081431/1‑94 (MQ=60)
CAGGCCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTG < SRR4302540.7407406/94‑1 (MQ=60)
CAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGA > SRR4302540.9711655/1‑94 (MQ=60)
AGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAG < SRR4302540.1424183/94‑1 (MQ=60)
AGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAG > SRR4302540.6357530/1‑94 (MQ=60)
AGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAG > SRR4302540.6357529/1‑94 (MQ=60)
AGGCCAAT‑CA‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAG < SRR4302540.2534527/94‑1 (MQ=60)
GGCCAATCCC‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAG < SRR4302540.8859952/94‑1 (MQ=60)
GGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGC > SRR4302540.9570628/1‑94 (MQ=60)
CCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCG < SRR4302540.1415675/94‑1 (MQ=60)
CCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCG > SRR4302540.9939375/1‑94 (MQ=60)
CCAAT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCG < SRR4302540.478682/94‑1 (MQ=60)
CCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGCTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGG > SRR4302540.1239744/1‑94 (MQ=60)
ccgatcgcC‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCG < SRR4302540.8608709/86‑1 (MQ=60)
AT‑CGC‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCA > SRR4302540.3814735/1‑94 (MQ=60)
AT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAA > SRR4302540.7914032/1‑94 (MQ=60)
AT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAA > SRR4302540.10085271/1‑94 (MQ=60)
T‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAAT < SRR4302540.9777524/94‑1 (MQ=60)
CC‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATG < SRR4302540.6435803/94‑1 (MQ=60)
G‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGG > SRR4302540.5962854/1‑94 (MQ=60)
C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGC > SRR4302540.4295222/1‑94 (MQ=60)
C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGC > SRR4302540.4295226/1‑94 (MQ=60)
C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGC > SRR4302540.5950635/1‑94 (MQ=60)
C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGC > SRR4302540.1256222/1‑94 (MQ=60)
C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGC < SRR4302540.1908231/94‑1 (MQ=60)
CC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGCAT < SRR4302540.6836363/94‑1 (MQ=60)
CC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGCAT < SRR4302540.5055621/94‑1 (MQ=60)
C‑CCGGGCTTCCAGCCGATCCGCATCCTGGCCAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGCATG < SRR4302540.1948229/94‑1 (MQ=60)
C‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGCATG < SRR4302540.2470906/94‑1 (MQ=60)
C‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGCATG < SRR4302540.2470905/94‑1 (MQ=60)
C‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGCATG > SRR4302540.8276591/1‑94 (MQ=60)
C‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGCATG < SRR4302540.8816426/94‑1 (MQ=60)
CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGCATGA > SRR4302540.841140/1‑94 (MQ=60)
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GGGCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGCAAACACGCGCGCCAGGCCAAT‑CG‑‑C‑CCC‑CAGGGCTTCCAGCCGATCCGCATCCTGGACAATTTTAGCTTCCGTTGTTAAGGGGGCGATTTGCGCGCTGAAACTGTGAGCGGCAATGGCATGA > NC_000913/2030614‑2030799
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
