Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,035,940 T→C I79V (ATC→GTC)  yedV ← putative 2‑component sensor protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,035,9400TC99.1% 1454.9 / ‑0.5 449I79V (ATC→GTC) yedVputative 2‑component sensor protein
Reads supporting (aligned to +/- strand):  ref base T (1/3);  new base C (196/248);  total (198/251)
Fisher's exact test for biased strand distribution p-value = 6.34e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.66e-01

Only 100 of 456 total aligned reads displayed.

TCTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGATATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTG  >  NC_000913/2035850‑2036029
                                                                                          |                                                                                         
 ctcACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATc                                                                                        <  2:9654741/93‑1 (MQ=255)
  tcACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATcc                                                                                       >  2:9804168/1‑93 (MQ=255)
  tcACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATcc                                                                                       <  2:5381847/93‑1 (MQ=255)
    aCTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTg                                                                                     >  2:4065060/1‑93 (MQ=255)
     cTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTgc                                                                                    >  2:3338297/1‑92 (MQ=255)
     cTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGa                                                                                    >  2:2188462/1‑93 (MQ=255)
     cTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGa                                                                                    <  1:9410610/93‑1 (MQ=255)
     cTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGa                                                                                    <  2:3433971/93‑1 (MQ=255)
      tAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGAc                                                                                   >  2:7494581/1‑93 (MQ=255)
      tAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGAc                                                                                   <  1:3959621/93‑1 (MQ=255)
         cAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTaa                                                                                <  2:7075836/93‑1 (MQ=255)
          aGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAAc                                                                               >  2:607023/1‑93 (MQ=255)
          aGGTATGTTAATTAACATGCCATCACTGACATTTGTCCAGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAAc                                                                               <  1:4803037/93‑1 (MQ=255)
            gTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAAcat                                                                             >  2:8998820/1‑93 (MQ=255)
            gTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAAcat                                                                             >  1:1779831/1‑93 (MQ=255)
             tATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAAcatc                                                                            >  2:2871592/1‑93 (MQ=255)
              aTGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAAcatcc                                                                           <  1:9729626/93‑1 (MQ=255)
              aTGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAAcatcc                                                                           <  1:4382718/93‑1 (MQ=255)
              aTGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATAAATAATCAAGACATCCTGACTAAcatcc                                                                           <  2:4934425/93‑1 (MQ=255)
               tGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAAcatcca                                                                          <  2:236939/93‑1 (MQ=255)
                gTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAAcatccat                                                                         <  2:2615416/93‑1 (MQ=255)
                gTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAAcatccat                                                                         <  2:7994592/93‑1 (MQ=255)
                  tATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCcatca                                                                       <  1:5362899/93‑1 (MQ=255)
                   aTTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCcatcat                                                                      >  1:6004221/1‑93 (MQ=255)
                    tttAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCatcatc                                                                     <  2:153537/93‑1 (MQ=255)
                      tAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCg                                                                   <  2:9157178/93‑1 (MQ=255)
                      tAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCg                                                                   <  2:6342987/93‑1 (MQ=255)
                        aCATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGt                                                                 >  1:817763/1‑93 (MQ=255)
                          aTGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTa                                                               >  1:2378979/1‑93 (MQ=255)
                           tGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTaa                                                              <  1:6673290/93‑1 (MQ=255)
                            gCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGCAATCCTGACTAACATCCATCATCCGGTTcaa                                                             >  1:5074153/1‑93 (MQ=255)
                             ccATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAg                                                            >  1:363960/1‑93 (MQ=255)
                              cATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGt                                                           >  2:8821107/1‑93 (MQ=255)
                              cATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGt                                                           >  1:1306309/1‑93 (MQ=255)
                              cATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGt                                                           <  2:6494818/93‑1 (MQ=255)
                               aTCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTa                                                          <  1:3798229/93‑1 (MQ=255)
                                tCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTac                                                         >  1:1839037/1‑93 (MQ=255)
                                tCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTac                                                         <  2:9886101/93‑1 (MQ=255)
                                tCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTac                                                         >  2:8214541/1‑93 (MQ=255)
                                 cACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTaca                                                        <  1:7499389/93‑1 (MQ=255)
                                  aCTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTacac                                                       >  2:1181587/1‑93 (MQ=255)
                                  aCTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTacac                                                       <  1:3093702/93‑1 (MQ=255)
                                    tGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAg                                                     >  1:9015151/1‑93 (MQ=255)
                                    tGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAg                                                     <  1:5012744/93‑1 (MQ=255)
                                    tGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAg                                                     >  2:7698801/1‑93 (MQ=255)
                                      aCATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGt                                                   <  1:141770/93‑1 (MQ=255)
                                      aCATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGt                                                   <  1:9530156/93‑1 (MQ=255)
                                      aCATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGt                                                   <  2:1383738/93‑1 (MQ=255)
                                        aTTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTaa                                                 >  1:5597837/1‑93 (MQ=255)
                                        aTTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTaa                                                 >  1:8427604/1‑93 (MQ=255)
                                         tttGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAAc                                                >  2:1632190/1‑93 (MQ=255)
                                         tttGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAAc                                                >  1:9269593/1‑93 (MQ=255)
                                          ttGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACg                                               <  2:3675845/93‑1 (MQ=255)
                                          ttGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACg                                               <  1:8671411/93‑1 (MQ=255)
                                            gaccGGTTAACAATTTTAGTGATGCTATCACCATAAATAATCAAGACATCCTGACTAACATCCATCAACCGGTTAAAGTACACAGGTAACGTa                                             <  2:7536331/91‑1 (MQ=255)
                                            gTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTa                                             <  2:4491800/93‑1 (MQ=255)
                                            gTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTa                                             <  2:5822531/93‑1 (MQ=255)
                                              ccGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATc                                           <  2:8352561/93‑1 (MQ=255)
                                                   tAACAATTTTATTGATGCTATCATCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGAt                                      <  2:7234730/93‑1 (MQ=255)
                                                   tAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGAt                                      <  2:9753949/93‑1 (MQ=255)
                                                       aaTTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTAc                                  >  1:2123354/1‑93 (MQ=255)
                                                       aaTTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTAc                                  <  1:1163070/93‑1 (MQ=255)
                                                         ttttATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTAccc                                >  1:4269805/1‑93 (MQ=255)
                                                           ttATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCa                              <  2:3205163/93‑1 (MQ=255)
                                                           ttATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCa                              >  1:2568721/1‑93 (MQ=255)
                                                            tATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCAt                             <  1:2710836/93‑1 (MQ=255)
                                                             aTTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATc                            <  2:5689083/93‑1 (MQ=255)
                                                               tGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCaa                          <  1:5458616/93‑1 (MQ=255)
                                                                gATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAAt                         >  2:4697116/1‑93 (MQ=255)
                                                                  tGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATGCGGTTAAAGTACACAGGAAACGTATCTGGATTTACCCCATCAATTa                       >  1:4607858/1‑93 (MQ=255)
                                                                   gCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCACATCAATTaa                      >  2:3762873/1‑93 (MQ=255)
                                                                     tATCACCATGAATAATCAAGATATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTaaca                    <  2:6937489/93‑1 (MQ=255)
                                                                     tATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTaaca                    >  1:4088984/1‑93 (MQ=255)
                                                                      aTCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTaacaa                   <  2:4364701/93‑1 (MQ=255)
                                                                      aTCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTaacaa                   <  1:5713510/93‑1 (MQ=255)
                                                                       tCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTaacaac                  >  1:6912027/1‑93 (MQ=255)
                                                                       tCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTaacaac                  <  1:760861/93‑1 (MQ=255)
                                                                         aCCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTg                >  2:3053084/1‑93 (MQ=255)
                                                                          ccATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGc               >  2:6811109/1‑93 (MQ=255)
                                                                          ccATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGc               >  1:8921973/1‑93 (MQ=255)
                                                                           cATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCt              <  1:2007225/93‑1 (MQ=255)
                                                                           cATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCt              >  2:409399/1‑93 (MQ=255)
                                                                           cATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCt              <  2:8491361/93‑1 (MQ=255)
                                                                            aTGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCtt             <  1:6563527/93‑1 (MQ=255)
                                                                             tGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGTTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTg            <  2:9301509/93‑1 (MQ=255)
                                                                             tGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTCCCCCAGCAATTAACAACTGCTTg            <  1:7027498/93‑1 (MQ=255)
                                                                             tGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTg            >  2:7840107/1‑93 (MQ=255)
                                                                              gAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGa           <  2:5190392/93‑1 (MQ=255)
                                                                              gAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGa           >  1:7368495/1‑93 (MQ=255)
                                                                              gAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGa           <  2:4804885/93‑1 (MQ=255)
                                                                               aataatCAAGACATCCTGACTAGCATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGAt          >  2:6410675/1‑93 (MQ=255)
                                                                               aataatCAAGACATCCTGACTAACATCCATCATCCGGTTAAATTACACAGGTAACGTATCTAGATTTACCCCATCAATTAACAACTGCTTGAt          <  2:8613160/93‑1 (MQ=255)
                                                                               aataatCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGAt          >  1:3296560/1‑93 (MQ=255)
                                                                               aataatCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGAt          <  1:4494537/93‑1 (MQ=255)
                                                                                ataatCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATc         <  2:2496697/93‑1 (MQ=255)
                                                                                ataatCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATc         <  1:9892008/93‑1 (MQ=255)
                                                                                ataatCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATc         <  1:1013191/93‑1 (MQ=255)
                                                                                 taatCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCt        <  1:9103151/93‑1 (MQ=255)
                                                                                  aatCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTg       >  2:5556277/1‑93 (MQ=255)
                                                                                    tCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTgcg     >  2:1938980/1‑93 (MQ=255)
                                                                                          |                                                                                         
TCTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGATATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTG  >  NC_000913/2035850‑2036029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 226 total aligned reads displayed.
TTGTCTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGATATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCG  >  NC_000913/2035847‑2036033
                                                                                             |                                                                                             
TTGTCTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGAC                                                                                               <  SRR4302540.3808508/94‑1 (MQ=60)
 TGTCTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACA                                                                                              <  SRR4302540.5311746/94‑1 (MQ=60)
 TGTCTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACA                                                                                              <  SRR4302540.6414732/94‑1 (MQ=60)
 TGTCTCACTAGCAGGGATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACA                                                                                              <  SRR4302540.6414731/94‑1 (MQ=60)
  GTCTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACAT                                                                                             <  SRR4302540.3711224/94‑1 (MQ=60)
  GTCTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACAT                                                                                             <  SRR4302540.6288786/94‑1 (MQ=60)
  GTCTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACAT                                                                                             <  SRR4302540.1514132/94‑1 (MQ=60)
   TCTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATC                                                                                            <  SRR4302540.9094926/94‑1 (MQ=60)
    CTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCC                                                                                           >  SRR4302540.4413229/1‑94 (MQ=60)
    CTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCC                                                                                           >  SRR4302540.2572006/1‑94 (MQ=60)
     TCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCT                                                                                          <  SRR4302540.3447285/94‑1 (MQ=60)
     TCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCT                                                                                          <  SRR4302540.5409891/94‑1 (MQ=60)
      tgCTAGCAGGTATGTTATTTAACCTGCCATCACTAACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTG                                                                                         <  SRR4302540.6604322/92‑1 (MQ=60)
      CACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTG                                                                                         >  SRR4302540.1841569/1‑94 (MQ=60)
      CACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTG                                                                                         <  SRR4302540.5485147/94‑1 (MQ=60)
      CACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTG                                                                                         >  SRR4302540.4728023/1‑94 (MQ=60)
       ACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGA                                                                                        >  SRR4302540.4605747/1‑94 (MQ=60)
       ACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGA                                                                                        >  SRR4302540.4605746/1‑94 (MQ=60)
        CTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGAT                                                                                       >  SRR4302540.9489856/1‑94 (MQ=60)
        CTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGAC                                                                                       <  SRR4302540.5348073/94‑1 (MQ=60)
        CTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGAC                                                                                       <  SRR4302540.9522506/94‑1 (MQ=60)
         TAGCAGGTGTGTTATTTAACATGCCATCACGGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACT                                                                                      <  SRR4302540.5763855/94‑1 (MQ=60)
         TAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACT                                                                                      <  SRR4302540.4002332/94‑1 (MQ=60)
          AGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTA                                                                                     >  SRR4302540.7614984/1‑94 (MQ=60)
          AGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTA                                                                                     >  SRR4302540.10077790/1‑94 (MQ=60)
             AGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGCATAATCAAGACATCCTGACTAACA                                                                                  >  SRR4302540.432818/1‑94 (MQ=60)
             AGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACA                                                                                  <  SRR4302540.1353726/94‑1 (MQ=60)
             AGGTATGTTAATTAACATGCCATCACTGACATTTGTCCAGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACA                                                                                  <  SRR4302540.4854440/94‑1 (MQ=60)
              GGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACAT                                                                                 <  SRR4302540.7228906/94‑1 (MQ=60)
              GGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACAT                                                                                 >  SRR4302540.1799155/1‑94 (MQ=60)
              GGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACAT                                                                                 >  SRR4302540.1799154/1‑94 (MQ=60)
              GGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACAT                                                                                 >  SRR4302540.2266049/1‑94 (MQ=60)
               GTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATC                                                                                >  SRR4302540.9574621/1‑94 (MQ=60)
               GTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATC                                                                                <  SRR4302540.3297856/94‑1 (MQ=60)
               GTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATC                                                                                <  SRR4302540.8616789/94‑1 (MQ=60)
                TATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCC                                                                               >  SRR4302540.7979411/1‑94 (MQ=60)
                 ATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCA                                                                              <  SRR4302540.9843882/94‑1 (MQ=60)
                 ATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCA                                                                              <  SRR4302540.4430308/94‑1 (MQ=60)
                  TGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCAT                                                                             >  SRR4302540.5045753/1‑94 (MQ=60)
                   GTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGATATCCTGACTAACATCCATC                                                                            >  SRR4302540.6643355/1‑94 (MQ=60)
                   GTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATC                                                                            >  SRR4302540.3886691/1‑94 (MQ=60)
                   GTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACAGCCTGACTAACATCCATC                                                                            >  SRR4302540.9064842/1‑94 (MQ=60)
                    TTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCA                                                                           <  SRR4302540.8717787/94‑1 (MQ=60)
                    TTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCA                                                                           >  SRR4302540.9083923/1‑94 (MQ=60)
                    TTATTTAACATGCCATCACTGACATTTATCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCA                                                                           <  SRR4302540.1759292/94‑1 (MQ=60)
                     TATTTAACATGCCATCACTGCCATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCAT                                                                          >  SRR4302540.8516908/1‑94 (MQ=60)
                     TATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCAT                                                                          <  SRR4302540.2131345/94‑1 (MQ=60)
                     TATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCAT                                                                          >  SRR4302540.412120/1‑94 (MQ=60)
                     TATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCAT                                                                          <  SRR4302540.5421806/94‑1 (MQ=60)
                     TATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCAT                                                                          >  SRR4302540.6070780/1‑94 (MQ=60)
                     TATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCAT                                                                          >  SRR4302540.5961631/1‑94 (MQ=60)
                       TTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCC                                                                        <  SRR4302540.2035137/94‑1 (MQ=60)
                       TTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCC                                                                        <  SRR4302540.9249176/94‑1 (MQ=60)
                         TAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGG                                                                      >  SRR4302540.3239970/1‑94 (MQ=60)
                         TAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGG                                                                      <  SRR4302540.5954567/94‑1 (MQ=60)
                          AACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGATATCCTGACTAACATCCATCATCCGGT                                                                     <  SRR4302540.6773416/94‑1 (MQ=60)
                          AACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGT                                                                     <  SRR4302540.1208379/94‑1 (MQ=60)
                          AACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGT                                                                     >  SRR4302540.826452/1‑94 (MQ=60)
                           ACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTT                                                                    <  SRR4302540.3020496/94‑1 (MQ=60)
                            CATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTA                                                                   >  SRR4302540.2404613/1‑94 (MQ=60)
                              TGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTATCATCCATCATCCGGTTAAA                                                                 <  SRR4302540.419946/94‑1 (MQ=60)
                              TGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAA                                                                 <  SRR4302540.6747019/94‑1 (MQ=60)
                               GCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAG                                                                >  SRR4302540.367705/1‑94 (MQ=60)
                               GCCATCACTGACATTTGTCCGGATAACAATTTTATTGATGCAATCACCATGAATAATCAAAACATCCTGACTAACATCCATCATCCGGTTAAAG                                                                <  SRR4302540.9051163/94‑1 (MQ=60)
                                CCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGT                                                               <  SRR4302540.9607733/94‑1 (MQ=60)
                                CCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGT                                                               <  SRR4302540.9473194/94‑1 (MQ=60)
                                CCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGT                                                               >  SRR4302540.5144457/1‑94 (MQ=60)
                                CCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGT                                                               >  SRR4302540.1319862/1‑94 (MQ=60)
                                 CATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTA                                                              <  SRR4302540.1028821/94‑1 (MQ=60)
                                 CATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTA                                                              >  SRR4302540.9148313/1‑94 (MQ=60)
                                 CATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTA                                                              >  SRR4302540.3857482/1‑94 (MQ=60)
                                 CATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTA                                                              <  SRR4302540.1028819/94‑1 (MQ=60)
                                 CATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTA                                                              <  SRR4302540.5631480/94‑1 (MQ=60)
                                  ATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTAC                                                             <  SRR4302540.4137529/94‑1 (MQ=60)
                                  ATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTAC                                                             >  SRR4302540.3686866/1‑94 (MQ=60)
                                   TCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACA                                                            >  SRR4302540.4408238/1‑94 (MQ=60)
                                    CACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACAC                                                           <  SRR4302540.7583185/94‑1 (MQ=60)
                                    CACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACAC                                                           >  SRR4302540.7549104/1‑94 (MQ=60)
                                    CACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACAC                                                           <  SRR4302540.5020282/94‑1 (MQ=60)
                                    CACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACAC                                                           <  SRR4302540.6414548/94‑1 (MQ=60)
                                     ACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACA                                                          <  SRR4302540.3127623/94‑1 (MQ=60)
                                     ACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACA                                                          <  SRR4302540.9556950/94‑1 (MQ=60)
                                     ACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACA                                                          >  SRR4302540.9311518/1‑94 (MQ=60)
                                      CTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAG                                                         >  SRR4302540.4053225/1‑94 (MQ=60)
                                      CTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAG                                                         <  SRR4302540.9881710/94‑1 (MQ=60)
                                      CTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAG                                                         <  SRR4302540.4214935/94‑1 (MQ=60)
                                      CTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAG                                                         <  SRR4302540.3911196/94‑1 (MQ=60)
                                       TGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGG                                                        >  SRR4302540.8982343/1‑94 (MQ=60)
                                       TGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGG                                                        >  SRR4302540.161223/1‑94 (MQ=60)
                                       TGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGG                                                        <  SRR4302540.5067016/94‑1 (MQ=60)
                                        GACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGT                                                       >  SRR4302540.755204/1‑94 (MQ=60)
                                        GACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGT                                                       <  SRR4302540.8016236/94‑1 (MQ=60)
                                        GACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGT                                                       <  SRR4302540.5071747/94‑1 (MQ=60)
                                        GACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGA                                                       >  SRR4302540.1976100/1‑94 (MQ=60)
                                         ACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTA                                                      <  SRR4302540.143242/94‑1 (MQ=60)
                                          CATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAA                                                     >  SRR4302540.5659425/1‑94 (MQ=60)
                                          CATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAA                                                     >  SRR4302540.8525444/1‑94 (MQ=60)
                                           ATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAAC                                                    >  SRR4302540.9139663/1‑94 (MQ=60)
                                           ATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAAC                                                    >  SRR4302540.7473560/1‑94 (MQ=60)
                                           ATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAAC                                                    >  SRR4302540.3206433/1‑94 (MQ=60)
                                             TTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGT                                                  <  SRR4302540.4297418/94‑1 (MQ=60)
                                             TTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGT                                                  <  SRR4302540.8772136/94‑1 (MQ=60)
                                              TGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTA                                                 >  SRR4302540.1912044/1‑94 (MQ=60)
                                               GTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTAT                                                <  SRR4302540.2895817/94‑1 (MQ=60)
                                               GTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTAT                                                <  SRR4302540.2221805/94‑1 (MQ=60)
                                                TCCGGTTAACAATTTTATTGATTCTATCACCATGAATAATCAAGGCATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATC                                               <  SRR4302540.665747/94‑1 (MQ=60)
                                                TCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATC                                               <  SRR4302540.2777721/94‑1 (MQ=60)
                                                 CCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCT                                              >  SRR4302540.2687546/1‑94 (MQ=60)
                                                  CGGTTAACAATTTTATTGATGCTATTACCATGAATAATCAAGACATCCTGCCTAACATCCATCATCCGGTTtcactccacagggaacctatctg                                             >  SRR4302540.6827330/1‑71 (MQ=60)
                                                  CGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTG                                             >  SRR4302540.6827329/1‑94 (MQ=60)
                                                  CGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTG                                             <  SRR4302540.1266331/94‑1 (MQ=60)
                                                  CGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTG                                             <  SRR4302540.5200143/94‑1 (MQ=60)
                                                  CGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTG                                             <  SRR4302540.3492725/94‑1 (MQ=60)
                                                  CGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTG                                             <  SRR4302540.1342927/94‑1 (MQ=60)
                                                   GGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGG                                            >  SRR4302540.1947933/1‑94 (MQ=60)
                                                   GGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGG                                            <  SRR4302540.3701696/94‑1 (MQ=60)
                                                   GGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGG                                            >  SRR4302540.8638962/1‑94 (MQ=60)
                                                   GGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGG                                            >  SRR4302540.5700414/1‑94 (MQ=60)
                                                    GTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGA                                           <  SRR4302540.9475308/94‑1 (MQ=60)
                                                    GTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGA                                           >  SRR4302540.9898310/1‑94 (MQ=60)
                                                     TTAACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGAT                                          >  SRR4302540.9685396/1‑94 (MQ=60)
                                                       AACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTT                                        >  SRR4302540.5922970/1‑94 (MQ=60)
                                                        ACAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTA                                       <  SRR4302540.2561071/94‑1 (MQ=60)
                                                         CAATTTTATTGATGCTATCACCATGAATAATCAAGTCATTCTGACTAACATCCATCATCCGGTTAAAGTACGCAGGTAACGTATCTGGATTTAC                                      <  SRR4302540.6434512/94‑1 (MQ=60)
                                                         CAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTAC                                      >  SRR4302540.2146130/1‑94 (MQ=60)
                                                         CAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTAC                                      <  SRR4302540.5617837/94‑1 (MQ=60)
                                                         CAATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTAC                                      >  SRR4302540.2146134/1‑94 (MQ=60)
                                                          AATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACC                                     <  SRR4302540.1175145/94‑1 (MQ=60)
                                                          AATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACC                                     >  SRR4302540.9477139/1‑94 (MQ=60)
                                                          AATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACC                                     >  SRR4302540.9149637/1‑94 (MQ=60)
                                                           ATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCC                                    >  SRR4302540.4316245/1‑94 (MQ=60)
                                                           ATTTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCC                                    <  SRR4302540.9836724/94‑1 (MQ=60)
                                                             TTTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCA                                  >  SRR4302540.2596418/1‑94 (MQ=60)
                                                              TTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCAT                                 <  SRR4302540.1619986/94‑1 (MQ=60)
                                                              TTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCAT                                 <  SRR4302540.8234985/94‑1 (MQ=60)
                                                              TTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCAT                                 <  SRR4302540.7033500/94‑1 (MQ=60)
                                                              TTATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCAT                                 <  SRR4302540.7258808/94‑1 (MQ=60)
                                                               TATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATC                                >  SRR4302540.3882279/1‑94 (MQ=60)
                                                               TATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATC                                >  SRR4302540.6694701/1‑94 (MQ=60)
                                                               TATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATC                                <  SRR4302540.4557490/94‑1 (MQ=60)
                                                               TATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATC                                <  SRR4302540.2740068/94‑1 (MQ=60)
                                                                ATTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCA                               <  SRR4302540.3719004/94‑1 (MQ=60)
                                                                 TTGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAA                              <  SRR4302540.4008331/94‑1 (MQ=60)
                                                                  TGATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAAT                             <  SRR4302540.5518692/94‑1 (MQ=60)
                                                                   GATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATT                            >  SRR4302540.70088/1‑94 (MQ=60)
                                                                   GATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATT                            <  SRR4302540.141488/94‑1 (MQ=60)
                                                                   GATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATT                            >  SRR4302540.1154076/1‑94 (MQ=60)
                                                                    ATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATGCGGTTAAAGTACACAGGAAACGTATCTGGATTTACCCCATCAATTA                           >  SRR4302540.4657340/1‑94 (MQ=60)
                                                                    ATGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTA                           <  SRR4302540.5116338/94‑1 (MQ=60)
                                                                     TGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAA                          <  SRR4302540.7258422/94‑1 (MQ=60)
                                                                     TGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAA                          <  SRR4302540.5128344/94‑1 (MQ=60)
                                                                     TGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAA                          >  SRR4302540.7615985/1‑94 (MQ=60)
                                                                     TGCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAA                          >  SRR4302540.2650176/1‑94 (MQ=60)
                                                                      GCTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAAC                         <  SRR4302540.2509060/94‑1 (MQ=60)
                                                                       CTATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACA                        >  SRR4302540.7054358/1‑94 (MQ=60)
                                                                        TATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAA                       >  SRR4302540.6769545/1‑94 (MQ=60)
                                                                        TATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAA                       >  SRR4302540.7843288/1‑94 (MQ=60)
                                                                        TATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAA                       >  SRR4302540.8850267/1‑94 (MQ=60)
                                                                        TATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAA                       <  SRR4302540.5695543/94‑1 (MQ=60)
                                                                        TATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAA                       >  SRR4302540.8525323/1‑94 (MQ=60)
                                                                         ATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAAC                      <  SRR4302540.4532427/94‑1 (MQ=60)
                                                                         ATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAAC                      <  SRR4302540.4468957/94‑1 (MQ=60)
                                                                         ATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAAC                      <  SRR4302540.5776403/94‑1 (MQ=60)
                                                                         ATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAAC                      <  SRR4302540.4815411/94‑1 (MQ=60)
                                                                         ATCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAAC                      >  SRR4302540.4768539/1‑94 (MQ=60)
                                                                          TCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACT                     <  SRR4302540.9324484/94‑1 (MQ=60)
                                                                          TCACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACT                     <  SRR4302540.768957/94‑1 (MQ=60)
                                                                           CACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTG                    <  SRR4302540.5574172/94‑1 (MQ=60)
                                                                            ACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGC                   <  SRR4302540.492890/94‑1 (MQ=60)
                                                                            ACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGC                   >  SRR4302540.2200272/1‑94 (MQ=60)
                                                                            ACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGC                   >  SRR4302540.9025429/1‑94 (MQ=60)
                                                                            ACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGC                   >  SRR4302540.1270616/1‑94 (MQ=60)
                                                                            ACCATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGC                   >  SRR4302540.2679521/1‑94 (MQ=60)
                                                                              CATGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTT                 <  SRR4302540.2028939/94‑1 (MQ=60)
                                                                                TGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTCCCCCAGCAATTAACAACTGCTTGA               <  SRR4302540.7105578/94‑1 (MQ=60)
                                                                                TGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGA               >  SRR4302540.6145128/1‑94 (MQ=60)
                                                                                TGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGA               >  SRR4302540.7426579/1‑94 (MQ=60)
                                                                                TGAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGA               >  SRR4302540.7450639/1‑94 (MQ=60)
                                                                                 GAATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGAT              >  SRR4302540.3332640/1‑94 (MQ=60)
                                                                                  AATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATC             >  SRR4302540.9288917/1‑94 (MQ=60)
                                                                                  AATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATC             <  SRR4302540.4543269/94‑1 (MQ=60)
                                                                                   ATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCT            <  SRR4302540.10007511/94‑1 (MQ=60)
                                                                                   ATAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCT            <  SRR4302540.1023461/94‑1 (MQ=60)
                                                                                    TAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTG           <  SRR4302540.9212537/94‑1 (MQ=60)
                                                                                    TAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTG           >  SRR4302540.4507168/1‑94 (MQ=60)
                                                                                    TAATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTG           <  SRR4302540.9836766/94‑1 (MQ=60)
                                                                                     AATCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGC          >  SRR4302540.432360/1‑94 (MQ=60)
                                                                                       TCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGC        >  SRR4302540.8669336/1‑94 (MQ=60)
                                                                                       TCAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGC        >  SRR4302540.6269414/1‑94 (MQ=60)
                                                                                        CAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCT       <  SRR4302540.182084/94‑1 (MQ=60)
                                                                                        CAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCT       <  SRR4302540.9715902/94‑1 (MQ=60)
                                                                                        CAAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCT       >  SRR4302540.3552583/1‑94 (MQ=60)
                                                                                         AAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTG      <  SRR4302540.5438663/94‑1 (MQ=60)
                                                                                         AAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTG      <  SRR4302540.1861172/94‑1 (MQ=60)
                                                                                         AAGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTG      <  SRR4302540.5438662/94‑1 (MQ=60)
                                                                                          AGACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGT     >  SRR4302540.4790629/1‑94 (MQ=60)
                                                                                           GACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTC    >  SRR4302540.8439989/1‑94 (MQ=60)
                                                                                            ACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCC   <  SRR4302540.8049775/94‑1 (MQ=60)
                                                                                            ACATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCC   <  SRR4302540.1259677/94‑1 (MQ=60)
                                                                                             CATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCG  <  SRR4302540.6244561/94‑1 (MQ=60)
                                                                                             |                                                                                             
TTGTCTCACTAGCAGGTATGTTATTTAACATGCCATCACTGACATTTGTCCGGTTAACAATTTTATTGATGCTATCACCATGAATAATCAAGATATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCG  >  NC_000913/2035847‑2036033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: