Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGTCCC > NC_000913/2240495‑2240680
|
CATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAAGCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGC < SRR4302540.2874840/94‑1 (MQ=60)
ATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCA > SRR4302540.8514476/1‑94 (MQ=60)
ATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCA > SRR4302540.8359202/1‑94 (MQ=60)
ATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCA > SRR4302540.4441376/1‑94 (MQ=60)
TCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCAT < SRR4302540.522765/94‑1 (MQ=60)
ACCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCAT < SRR4302540.1612969/94‑1 (MQ=60)
CCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATT < SRR4302540.3177902/94‑1 (MQ=60)
CGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTA > SRR4302540.9811165/1‑94 (MQ=60)
GGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAA > SRR4302540.8073140/1‑94 (MQ=60)
CGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAAC < SRR4302540.688801/94‑1 (MQ=60)
CGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAAC > SRR4302540.1751169/1‑94 (MQ=60)
GTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACA < SRR4302540.10110361/94‑1 (MQ=60)
GTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACA > SRR4302540.6652646/1‑94 (MQ=60)
GTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACA < SRR4302540.8351314/94‑1 (MQ=60)
GCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAAGAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAG < SRR4302540.9645025/94‑1 (MQ=60)
CCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGG > SRR4302540.2844545/1‑94 (MQ=60)
CCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGG < SRR4302540.4855012/94‑1 (MQ=60)
CCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGG > SRR4302540.665462/1‑94 (MQ=60)
GCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTT < SRR4302540.7058414/94‑1 (MQ=60)
GGCGGCTGGTCTGGCTGTAGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTT < SRR4302540.3228150/94‑1 (MQ=60)
CGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTT < SRR4302540.5604841/94‑1 (MQ=60)
CGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTT > SRR4302540.9968650/1‑94 (MQ=60)
CGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTT > SRR4302540.1579224/1‑94 (MQ=60)
CGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTT > SRR4302540.7989132/1‑94 (MQ=60)
GCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTT < SRR4302540.195640/94‑1 (MQ=60)
GCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTT < SRR4302540.5811334/94‑1 (MQ=60)
CGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTA < SRR4302540.977669/94‑1 (MQ=60)
GGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTAC > SRR4302540.6889859/1‑94 (MQ=60)
GCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACC < SRR4302540.5908942/94‑1 (MQ=60)
GCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACC < SRR4302540.6279801/94‑1 (MQ=60)
GCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACC < SRR4302540.9265711/94‑1 (MQ=60)
CTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCG < SRR4302540.7473057/94‑1 (MQ=60)
CTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCG > SRR4302540.6038909/1‑94 (MQ=60)
CTGGACGGGCTGTCGAAAATCAGCACCAATCACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCG < SRR4302540.1742853/94‑1 (MQ=60)
TGGTCGGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCGCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGA < SRR4302540.90206/94‑1 (MQ=60)
GGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGAT > SRR4302540.8892499/1‑94 (MQ=60)
GGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGAT < SRR4302540.7074558/94‑1 (MQ=60)
GGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGAT > SRR4302540.2640921/1‑94 (MQ=60)
GGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGAT < SRR4302540.8863539/94‑1 (MQ=60)
GGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGAT < SRR4302540.7478566/94‑1 (MQ=60)
GTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATG < SRR4302540.5969003/94‑1 (MQ=60)
GTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATG < SRR4302540.2671235/94‑1 (MQ=60)
GTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATG > SRR4302540.4034743/1‑94 (MQ=60)
GTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATG < SRR4302540.2389211/94‑1 (MQ=60)
TCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGG < SRR4302540.7465833/94‑1 (MQ=60)
CTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGC < SRR4302540.8076599/94‑1 (MQ=60)
CTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACTGATGGCGCAT > SRR4302540.9462998/1‑94 (MQ=60)
CTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCAT < SRR4302540.322701/94‑1 (MQ=60)
TGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATC > SRR4302540.5537097/1‑94 (MQ=60)
TGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATC < SRR4302540.7417144/94‑1 (MQ=60)
TGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATC > SRR4302540.7904662/1‑94 (MQ=60)
GTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCG > SRR4302540.6337365/1‑94 (MQ=60)
GTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCG < SRR4302540.8669209/94‑1 (MQ=60)
CGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCG < SRR4302540.9306975/94‑1 (MQ=60)
GGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGC > SRR4302540.696939/1‑94 (MQ=60)
GGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGC < SRR4302540.2710289/94‑1 (MQ=60)
AATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACC < SRR4302540.8949827/94‑1 (MQ=60)
ATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCA < SRR4302540.2499927/94‑1 (MQ=60)
ATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCA < SRR4302540.3853512/94‑1 (MQ=60)
ATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCA < SRR4302540.9385929/94‑1 (MQ=60)
ATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCA < SRR4302540.60121/94‑1 (MQ=60)
CAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGC > SRR4302540.1660664/1‑94 (MQ=60)
AGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCC < SRR4302540.3297319/94‑1 (MQ=60)
AGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCC < SRR4302540.7965971/94‑1 (MQ=60)
AGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCC < SRR4302540.308658/94‑1 (MQ=60)
AGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCC > SRR4302540.6657437/1‑94 (MQ=60)
AGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCC < SRR4302540.6054819/94‑1 (MQ=60)
AGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCC < SRR4302540.6054818/94‑1 (MQ=60)
GCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCG > SRR4302540.9942938/1‑94 (MQ=60)
CCCAATAACAGCAAACCGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGAC < SRR4302540.9081822/94‑1 (MQ=60)
CCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCA > SRR4302540.5858891/1‑94 (MQ=60)
CCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCA > SRR4302540.8396672/1‑94 (MQ=60)
CCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTCACCGATGGCGCATCGCGCACCAGCCGCCG > SRR4302540.1295955/1‑94 (MQ=60)
TAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAG > SRR4302540.8411500/1‑94 (MQ=60)
AACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTGTTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGA < SRR4302540.7504351/94‑1 (MQ=60)
ACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGAT > SRR4302540.6758387/1‑94 (MQ=60)
CAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATT > SRR4302540.7858617/1‑94 (MQ=60)
CAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATT > SRR4302540.7858616/1‑94 (MQ=60)
AGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTA > SRR4302540.567734/1‑94 (MQ=60)
AGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTA > SRR4302540.954356/1‑94 (MQ=60)
GCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAA < SRR4302540.9514699/94‑1 (MQ=60)
CAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAG < SRR4302540.5303256/94‑1 (MQ=60)
CAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAG < SRR4302540.2827741/94‑1 (MQ=60)
CAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAG < SRR4302540.2827742/94‑1 (MQ=60)
CAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAG < SRR4302540.9351324/94‑1 (MQ=60)
CAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAG < SRR4302540.3716614/94‑1 (MQ=60)
AAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGC < SRR4302540.9979638/94‑1 (MQ=60)
AAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCC < SRR4302540.6172145/94‑1 (MQ=60)
AACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCC < SRR4302540.6614966/94‑1 (MQ=60)
CGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCAC < SRR4302540.6000169/94‑1 (MQ=60)
GCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACC < SRR4302540.5740781/94‑1 (MQ=60)
GCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACC < SRR4302540.5626528/94‑1 (MQ=60)
CCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACC < SRR4302540.1639680/94‑1 (MQ=60)
CCAAGCCCTACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCA < SRR4302540.3094428/94‑1 (MQ=60)
CCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCA < SRR4302540.44444/94‑1 (MQ=60)
CCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCA < SRR4302540.8036550/94‑1 (MQ=60)
CAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAG > SRR4302540.9516277/1‑94 (MQ=60)
CAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAG < SRR4302540.2436111/94‑1 (MQ=60)
AGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCC > SRR4302540.9849159/1‑94 (MQ=60)
CCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCG > SRR4302540.9432431/1‑94 (MQ=60)
CCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCG < SRR4302540.2188286/94‑1 (MQ=60)
CCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGA > SRR4302540.2211553/1‑94 (MQ=60)
CCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGAATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGT > SRR4302540.6903994/1‑94 (MQ=60)
CCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGT > SRR4302540.7190092/1‑94 (MQ=60)
CCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTA < SRR4302540.7112928/94‑1 (MQ=60)
CACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAA < SRR4302540.7443548/94‑1 (MQ=60)
CACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAA < SRR4302540.3173972/94‑1 (MQ=60)
CACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAA > SRR4302540.358043/1‑94 (MQ=60)
ccaAGATACAGCATGACGCCTGTATTAAGCAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAG < SRR4302540.8791222/91‑1 (MQ=60)
ACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAC > SRR4302540.1211579/1‑94 (MQ=60)
ACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAG > SRR4302540.8202046/1‑94 (MQ=60)
CCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGC > SRR4302540.4712991/1‑94 (MQ=60)
CAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCC > SRR4302540.1054375/1‑94 (MQ=60)
CAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGAAAGCC > SRR4302540.8234780/1‑94 (MQ=60)
AGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCA > SRR4302540.3279352/1‑94 (MQ=60)
GATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAG < SRR4302540.9463745/94‑1 (MQ=60)
GATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAG > SRR4302540.2603042/1‑94 (MQ=60)
GAAAAAGCATGACGCCTTTAGTAAACAGGCTTTTTACCGATGTCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAG < SRR4302540.1755528/94‑1 (MQ=60)
TAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCA < SRR4302540.102880/94‑1 (MQ=60)
AAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAA > SRR4302540.8674940/1‑94 (MQ=60)
AAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAA > SRR4302540.8674939/1‑94 (MQ=60)
AAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAA > SRR4302540.4024182/1‑94 (MQ=60)
AAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAA > SRR4302540.1881452/1‑94 (MQ=60)
AAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAA > SRR4302540.6127432/1‑94 (MQ=60)
AAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAA < SRR4302540.7378293/94‑1 (MQ=60)
AAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAA > SRR4302540.2361849/1‑94 (MQ=60)
AAGCAGGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAA < SRR4302540.7378292/94‑1 (MQ=60)
AGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAA > SRR4302540.306815/1‑94 (MQ=60)
CATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAACCCAGCAAAATA > SRR4302540.7037855/1‑94 (MQ=60)
CATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATA > SRR4302540.9552675/1‑94 (MQ=60)
ATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATAT > SRR4302540.4675543/1‑94 (MQ=60)
ATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATAT > SRR4302540.4675542/1‑94 (MQ=60)
GACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCG < SRR4302540.4868289/94‑1 (MQ=60)
GACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCG < SRR4302540.8764193/94‑1 (MQ=60)
GACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCG < SRR4302540.207841/94‑1 (MQ=60)
CGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCC < SRR4302540.8495254/94‑1 (MQ=60)
CGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCC < SRR4302540.3944286/94‑1 (MQ=60)
GCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCG > SRR4302540.3118534/1‑94 (MQ=60)
CCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGT < SRR4302540.3050196/94‑1 (MQ=60)
CCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGT > SRR4302540.2024478/1‑94 (MQ=60)
CTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGTC > SRR4302540.9103558/1‑94 (MQ=60)
TGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGTCC > SRR4302540.8056470/1‑94 (MQ=60)
GTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGTCCC < SRR4302540.516330/94‑1 (MQ=60)
GTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGTCCC < SRR4302540.1942163/94‑1 (MQ=60)
GCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGTCCC > SRR4302540.7487741/1‑94 (MQ=60)
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CATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGTCCC > NC_000913/2240495‑2240680
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
