Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,240,588 |
T→C |
T134A (ACA→GCA) |
yeiB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,240,588 | 0 | T | C | 100.0%
| 672.7
/ NA
| 205 | T134A (ACA→GCA) | yeiB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (98/107); total (98/107) |
Only 100 of 216 total aligned reads displayed.
CGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGT > NC_000913/2240499‑2240677
|
cGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCAtt < 1:3628198/93‑1 (MQ=255)
cGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCAtt > 2:5742042/1‑93 (MQ=255)
cGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCAtt > 2:3064758/1‑93 (MQ=255)
cGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCAtt < 2:3200491/93‑1 (MQ=255)
gCGTCCAGGCGCGGCTGGTCTGGCTGTCGGGAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTaa > 2:1872688/1‑93 (MQ=255)
gCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCAttca > 1:1408212/1‑91 (MQ=255)
cttCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTaaa < 2:4258195/91‑1 (MQ=255)
tCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACa > 1:1192717/1‑93 (MQ=255)
tCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACa > 1:4511596/1‑93 (MQ=255)
tCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACa < 2:3341932/93‑1 (MQ=255)
ccAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAg > 1:1807079/1‑93 (MQ=255)
ccAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAg < 2:632309/93‑1 (MQ=255)
cAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAgg > 1:46896/1‑93 (MQ=255)
cAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAgg > 1:2546628/1‑93 (MQ=255)
cAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAgg > 1:3580577/1‑93 (MQ=255)
aGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGc < 1:792568/93‑1 (MQ=255)
ggCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCt < 2:2767046/93‑1 (MQ=255)
ggCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCt > 2:2711753/1‑93 (MQ=255)
ggCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCt < 2:2645458/93‑1 (MQ=255)
cgcgGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCttt < 1:4143847/93‑1 (MQ=255)
cgcgGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCttt < 1:5048162/93‑1 (MQ=255)
cgcgGCTGGTCTGGCTGTCCGAAATCAGCCCCAATAACAGCAACACGCCAAGCACCACCAGATAAAGCATGACGCCTGCATTAAACAGGCttt > 2:5252454/1‑93 (MQ=255)
gcgGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCtttt < 2:5013503/93‑1 (MQ=255)
gcgGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCtttt > 2:466408/1‑93 (MQ=255)
gcgGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCtttt > 2:3574226/1‑93 (MQ=255)
cgGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCttttt < 2:3741194/93‑1 (MQ=255)
ggCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTa < 2:5571757/93‑1 (MQ=255)
cTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTAcc < 2:1036212/93‑1 (MQ=255)
gTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGAt < 1:4435861/93‑1 (MQ=255)
gTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGAt > 2:5178727/1‑93 (MQ=255)
gTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGAt < 2:5817987/93‑1 (MQ=255)
tCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATg < 2:4101123/93‑1 (MQ=255)
tCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATg < 2:5415669/93‑1 (MQ=255)
cTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATgg < 1:3948522/93‑1 (MQ=255)
cTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATgg < 1:5537085/93‑1 (MQ=255)
ggCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGgcg < 1:4947606/93‑1 (MQ=255)
gCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGgcgc > 1:1864802/1‑93 (MQ=255)
tGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCAt < 1:4062656/93‑1 (MQ=255)
tGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCAt > 1:2113936/1‑93 (MQ=255)
gTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATc < 2:196050/93‑1 (MQ=255)
aaaTCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCa < 1:3420635/93‑1 (MQ=255)
aaTCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCAc > 2:4884684/1‑93 (MQ=255)
tCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCa > 2:4458522/1‑93 (MQ=255)
tCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCa > 1:565710/1‑93 (MQ=255)
tCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCa < 2:728040/93‑1 (MQ=255)
atcccaAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAgc < 2:3158388/91‑1 (MQ=255)
aGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAgc < 1:5709962/93‑1 (MQ=255)
aGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAgc > 1:3914623/1‑93 (MQ=255)
aGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAgc < 1:5238768/93‑1 (MQ=255)
aGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAgc > 2:4294237/1‑93 (MQ=255)
aGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAgc < 2:1477195/93‑1 (MQ=255)
cccAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAgccgc > 1:237635/1‑93 (MQ=255)
ccAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAgccgcc > 2:2867325/1‑93 (MQ=255)
cAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCca > 2:871394/1‑93 (MQ=255)
cAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCca < 2:2399155/93‑1 (MQ=255)
aaTAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCcag > 2:1903180/1‑93 (MQ=255)
aaTAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCcag > 1:431801/1‑93 (MQ=255)
aaTAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCcag < 1:1283723/93‑1 (MQ=255)
aCAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGa < 2:4583358/93‑1 (MQ=255)
aGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGAtt > 1:176305/1‑93 (MQ=255)
aGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGAtt < 1:2883650/93‑1 (MQ=255)
gCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTa > 1:3717156/1‑93 (MQ=255)
aaaaCGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAg < 1:5628306/93‑1 (MQ=255)
aaaaCGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAg > 1:5496755/1‑93 (MQ=255)
cGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCcca < 2:3960239/93‑1 (MQ=255)
gCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCccac > 1:512062/1‑93 (MQ=255)
ccAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCccacc > 1:461582/1‑93 (MQ=255)
ccAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCccacc > 1:5844970/1‑93 (MQ=255)
cAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCccacca > 2:1475403/1‑93 (MQ=255)
cAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCccacca > 1:1518804/1‑93 (MQ=255)
cAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCccacca < 2:5696580/93‑1 (MQ=255)
aaGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAg > 1:401530/1‑93 (MQ=255)
gCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGcc > 2:929476/1‑93 (MQ=255)
gCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGcc < 1:1040875/93‑1 (MQ=255)
ccaccaGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGt > 2:818478/1‑93 (MQ=255)
caccaGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTa > 2:3622970/1‑93 (MQ=255)
accaGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTaa < 1:2420799/93‑1 (MQ=255)
ccaGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAg > 2:5484810/1‑93 (MQ=255)
ccaGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAg < 2:1834406/93‑1 (MQ=255)
caGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGc > 1:5159948/1‑93 (MQ=255)
aGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGcc > 1:2337106/1‑93 (MQ=255)
gATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCa < 2:5724136/93‑1 (MQ=255)
gATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCa < 1:3677413/93‑1 (MQ=255)
aGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCaaa > 2:1311187/1‑93 (MQ=255)
aGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCaaa > 1:4298189/1‑93 (MQ=255)
gCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCaaaa > 1:13764/1‑93 (MQ=255)
gCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCaaaa < 1:6010782/93‑1 (MQ=255)
gCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCaaaa < 1:3078208/93‑1 (MQ=255)
aTGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAata < 2:1743271/93‑1 (MQ=255)
tGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAatat < 1:3529467/93‑1 (MQ=255)
gACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATc < 2:1124177/93‑1 (MQ=255)
gACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATc > 1:1710535/1‑93 (MQ=255)
gACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATc < 2:3265876/93‑1 (MQ=255)
aCGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCg < 1:5217264/93‑1 (MQ=255)
cGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGc < 1:2987045/93‑1 (MQ=255)
cGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCATAAGCCAGCAAAATATCGc < 2:6137292/93‑1 (MQ=255)
gCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGcc > 2:1162313/1‑93 (MQ=255)
ccTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCg > 1:1473294/1‑93 (MQ=255)
ccTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCg < 2:1264487/93‑1 (MQ=255)
cTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCACAATATCGCCGt > 2:1675120/1‑93 (MQ=255)
|
CGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGT > NC_000913/2240499‑2240677
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGTCCCA > NC_000913/2240495‑2240681
|
CATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGC > SRR4302533.46207/1‑94 (MQ=60)
TCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCAT < SRR4302533.2413013/94‑1 (MQ=60)
CCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATT > SRR4302533.5789089/1‑94 (MQ=60)
CGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTA < SRR4302533.3650524/94‑1 (MQ=60)
GGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTCA > SRR4302533.1416725/1‑94 (MQ=60)
GGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAA > SRR4302533.4988713/1‑94 (MQ=60)
GCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAA > SRR4302533.4330492/1‑94 (MQ=60)
CGTCCAGGCGCGGCTGGTCTGGCTGTTGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAAC < SRR4302533.4171963/94‑1 (MQ=60)
GTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACA > SRR4302533.1199886/1‑94 (MQ=60)
GTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACA > SRR4302533.4538916/1‑94 (MQ=60)
TCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAG > SRR4302533.1818076/1‑94 (MQ=60)
CCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGG > SRR4302533.3602638/1‑94 (MQ=60)
CCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGG > SRR4302533.47219/1‑94 (MQ=60)
CCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGG > SRR4302533.2562296/1‑94 (MQ=60)
AGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCT > SRR4302533.4726420/1‑94 (MQ=60)
AGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCT < SRR4302533.797232/94‑1 (MQ=60)
CGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTT < SRR4302533.4168966/94‑1 (MQ=60)
CGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTT < SRR4302533.5078698/94‑1 (MQ=60)
CGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTT < SRR4302533.2077157/94‑1 (MQ=60)
CGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTT > SRR4302533.5172013/1‑94 (MQ=60)
GCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTT < SRR4302533.5463990/94‑1 (MQ=60)
GCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTT > SRR4302533.1314759/1‑94 (MQ=60)
GCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACC < SRR4302533.4007056/94‑1 (MQ=60)
GGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGAT < SRR4302533.5260878/94‑1 (MQ=60)
GTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATG < SRR4302533.4462678/94‑1 (MQ=60)
GTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATG < SRR4302533.5601640/94‑1 (MQ=60)
CTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGC < SRR4302533.3972600/94‑1 (MQ=60)
CTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGC < SRR4302533.5570523/94‑1 (MQ=60)
GGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGC > SRR4302533.1876178/1‑94 (MQ=60)
GGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGC < SRR4302533.4977561/94‑1 (MQ=60)
GGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGC < SRR4302533.4522213/94‑1 (MQ=60)
GCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCA < SRR4302533.1848221/94‑1 (MQ=60)
CTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCAT > SRR4302533.1220063/1‑94 (MQ=60)
CTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCAT > SRR4302533.2126971/1‑94 (MQ=60)
CTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCAT > SRR4302533.1477950/1‑94 (MQ=60)
TGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATC < SRR4302533.4087386/94‑1 (MQ=60)
TGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATC > SRR4302533.655742/1‑94 (MQ=60)
GGCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCG < SRR4302533.2159145/94‑1 (MQ=60)
AAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCAC > SRR4302533.1645073/1‑94 (MQ=60)
AAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCAC < SRR4302533.3441771/94‑1 (MQ=60)
ATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCA > SRR4302533.569062/1‑94 (MQ=60)
ATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCA > SRR4302533.4407153/1‑94 (MQ=60)
CAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGC > SRR4302533.3938536/1‑94 (MQ=60)
CAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGC < SRR4302533.237497/94‑1 (MQ=60)
AGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCC < SRR4302533.5744450/94‑1 (MQ=60)
AGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCC < SRR4302533.5609136/94‑1 (MQ=60)
AGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCC < SRR4302533.5270267/94‑1 (MQ=60)
CCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGC > SRR4302533.5667178/1‑94 (MQ=60)
CCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGC > SRR4302533.239107/1‑94 (MQ=60)
CAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAG > SRR4302533.434375/1‑94 (MQ=60)
AATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGC < SRR4302533.1291447/94‑1 (MQ=60)
CAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATT > SRR4302533.177414/1‑94 (MQ=60)
AGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTA < SRR4302533.2901386/94‑1 (MQ=60)
AGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTA < SRR4302533.5121741/94‑1 (MQ=60)
AGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTA > SRR4302533.3739973/1‑94 (MQ=60)
CAAATCGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAG < SRR4302533.3919498/94‑1 (MQ=60)
CAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAG < SRR4302533.2379749/94‑1 (MQ=60)
CAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAG > SRR4302533.5529909/1‑94 (MQ=60)
AAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGC < SRR4302533.5662338/94‑1 (MQ=60)
AAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCC < SRR4302533.3434175/94‑1 (MQ=60)
AACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCC < SRR4302533.3192663/94‑1 (MQ=60)
AACGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGACC > SRR4302533.1776615/1‑94 (MQ=60)
CGCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCAC > SRR4302533.515105/1‑94 (MQ=60)
GCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACC > SRR4302533.464333/1‑94 (MQ=60)
GCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACC > SRR4302533.5880305/1‑94 (MQ=60)
GCCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACC < SRR4302533.3026025/94‑1 (MQ=60)
CCAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCA > SRR4302533.1527946/1‑94 (MQ=60)
CAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAG > SRR4302533.5553369/1‑94 (MQ=60)
CAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAG < SRR4302533.4550237/94‑1 (MQ=60)
CAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAG > SRR4302533.403952/1‑94 (MQ=60)
CAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAG > SRR4302533.5220416/1‑94 (MQ=60)
CAAGCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAG > SRR4302533.3964131/1‑94 (MQ=60)
GCCCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCC < SRR4302533.1046993/94‑1 (MQ=60)
CCCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGT > SRR4302533.1142119/1‑94 (MQ=60)
CCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTA < SRR4302533.3827328/94‑1 (MQ=60)
CCACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTA > SRR4302533.2669815/1‑94 (MQ=60)
CACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAA > SRR4302533.5704674/1‑94 (MQ=60)
ACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAG < SRR4302533.5112040/94‑1 (MQ=60)
ACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAG < SRR4302533.2435749/94‑1 (MQ=60)
ACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAG < SRR4302533.4700476/94‑1 (MQ=60)
ACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAG < SRR4302533.4452592/94‑1 (MQ=60)
ACCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAC > SRR4302533.3518863/1‑94 (MQ=60)
CCAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGC > SRR4302533.5191090/1‑94 (MQ=60)
CAGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCC > SRR4302533.2351572/1‑94 (MQ=60)
AGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCA > SRR4302533.2905561/1‑94 (MQ=60)
AGATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCA > SRR4302533.5997721/1‑94 (MQ=60)
GATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAG < SRR4302533.1412094/94‑1 (MQ=60)
GATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAG < SRR4302533.3700015/94‑1 (MQ=60)
GATAAAGCATGACGCATGCATTAAACAGGCTTTTTACCGATGGCTCATCGCGCACCAGCCTCCAGCAGATTAATCCCACCAGCCCGTAAGCCAG < SRR4302533.3700016/94‑1 (MQ=60)
ATAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGC < SRR4302533.4139602/94‑1 (MQ=60)
TAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCA > SRR4302533.175452/1‑94 (MQ=60)
TAAAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCA < SRR4302533.1586115/94‑1 (MQ=60)
AAGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAA > SRR4302533.4324039/1‑94 (MQ=60)
AGCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAA > SRR4302533.13867/1‑94 (MQ=60)
GCATGACGCCTGCATTAAGCAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCCCCAGCAGATTAAGCCCCCCAGCCCGTAAGCCAGCAAAAT < SRR4302533.2434663/94‑1 (MQ=60)
GCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAAT < SRR4302533.6047198/94‑1 (MQ=60)
GCATGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAAT < SRR4302533.3097097/94‑1 (MQ=60)
TGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATC < SRR4302533.3592207/94‑1 (MQ=60)
TGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATC < SRR4302533.1503420/94‑1 (MQ=60)
TGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATC > SRR4302533.1720901/1‑94 (MQ=60)
TGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATC < SRR4302533.3683094/94‑1 (MQ=60)
TGACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATC < SRR4302533.3551218/94‑1 (MQ=60)
GACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCG > SRR4302533.4048041/1‑94 (MQ=60)
ACGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGC < SRR4302533.5248672/94‑1 (MQ=60)
CGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCC < SRR4302533.364511/94‑1 (MQ=60)
CGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCC < SRR4302533.3005318/94‑1 (MQ=60)
CGCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCC > SRR4302533.2490057/1‑94 (MQ=60)
GCCTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCG > SRR4302533.1482198/1‑94 (MQ=60)
CTGCATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGTC > SRR4302533.394647/1‑94 (MQ=60)
CATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGTCCCA > SRR4302533.2142957/1‑94 (MQ=60)
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CATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTCGGAAATCAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCAGCAGATTAAGCCCACCAGCCCGTAAGCCAGCAAAATATCGCCGTCCCA > NC_000913/2240495‑2240681
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
