Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCACCTGTAACGCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTACT > NC_000913/2567606‑2567792
|
taccCCTGTAACGCCGGGAATTGTTTGAGAAAC‑AGTTCCGCCACGCCCGGTTGCATGCAAGGGCCGCCCGCCAGCCATAAATCAGTAATGCCCC < SRR4302540.1380571/90‑1 (MQ=60)
GCACCTGTAACGCCGGGAATTTTTTGCGAAAC‑AGTTCCGCCACGCCGGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCG < SRR4302540.3874681/94‑1 (MQ=60)
GCACCTGTAACGCCGGGAATTGTTTGCGAACC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCG < SRR4302540.7447511/94‑1 (MQ=60)
GCACCTGTAACGCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTG < SRR4302540.9198953/94‑1 (MQ=60)
ACCTGTAACGCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCC > SRR4302540.7795198/1‑94 (MQ=60)
CCTGTAACGCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCC > SRR4302540.9211244/1‑94 (MQ=60)
CCTGTAACGCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCC > SRR4302540.8319184/1‑94 (MQ=60)
CCTGTAACGCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCC > SRR4302540.7132086/1‑94 (MQ=60)
CTGTAACGCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGCTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCACCGCCCT > SRR4302540.4748497/1‑94 (MQ=60)
TGTAACGCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTT > SRR4302540.4014308/1‑94 (MQ=60)
TGTAACGCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTT > SRR4302540.1288520/1‑94 (MQ=60)
GTAACGCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTC > SRR4302540.753457/1‑94 (MQ=60)
caccgcagtgaaggtgtggcgaaccggtgCCGCCACGCCGGGTTGCATAAACGAGCCGCCCCCCAGCCATAAATCAGTAATGCCCCGCCCTTCA < SRR4302540.8376652/65‑1 (MQ=47)
CGCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATA < SRR4302540.7307521/94‑1 (MQ=60)
GCCGGTAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATAT < SRR4302540.6957853/94‑1 (MQ=60)
GCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATAT < SRR4302540.592770/94‑1 (MQ=60)
GCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATAT < SRR4302540.3624855/94‑1 (MQ=60)
GCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATAT < SRR4302540.1127045/94‑1 (MQ=60)
GCCGGAAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATAT < SRR4302540.4950035/94‑1 (MQ=60)
CCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATG < SRR4302540.9153275/94‑1 (MQ=60)
CCGGGAATGTTTTGCGAAAC‑AGTTCCCCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATG < SRR4302540.2422619/94‑1 (MQ=60)
CGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGC > SRR4302540.2062993/1‑94 (MQ=60)
CGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGC > SRR4302540.5270443/1‑94 (MQ=60)
GGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCC < SRR4302540.5821360/94‑1 (MQ=60)
GGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCC < SRR4302540.8229185/94‑1 (MQ=60)
GGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCC > SRR4302540.8409564/1‑94 (MQ=60)
GTAATGGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCG < SRR4302540.1268427/94‑1 (MQ=60)
GGAATTTTTTGCGAAAA‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCG < SRR4302540.3468725/94‑1 (MQ=60)
GGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATCCAAGAGCCGCCCGCACGCCATAACTACGTAATGCCCCGCCCTTCAATAgtccg > SRR4302540.8831671/1‑89 (MQ=60)
GGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCG > SRR4302540.8831672/1‑94 (MQ=60)
GGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCG > SRR4302540.6180919/1‑94 (MQ=60)
GGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCG < SRR4302540.827577/94‑1 (MQ=60)
GAAATTGTTGGCGAAAC‑ATTGCCGCCATGCCCGGTTGCCTACAGGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCG < SRR4302540.1268426/94‑1 (MQ=60)
aaagtgttgGCGAAAC‑AGTGCCGCCTCTCCCGGTTGCATACAGGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGG < SRR4302540.6693847/85‑1 (MQ=60)
GAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCTCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGG < SRR4302540.1800789/94‑1 (MQ=60)
GAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGG > SRR4302540.1066139/1‑94 (MQ=60)
GAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGG < SRR4302540.7731320/94‑1 (MQ=60)
GAAGTGTTTGCGAAAC‑AGTCCCGCCACGCCCGGTTCCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGG < SRR4302540.5498009/94‑1 (MQ=60)
gagttgttggcgacgcggtgCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGG < SRR4302540.7932246/74‑1 (MQ=60)
ATTTGTTTGCGAACC‑AGTCCCGCCCCGCCGGGTTGCATACAAGGGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGG < SRR4302540.5202849/94‑1 (MQ=60)
AATTGTTGGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGG < SRR4302540.4571302/94‑1 (MQ=60)
ATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGC > SRR4302540.7929487/1‑94 (MQ=60)
ATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGC > SRR4302540.4707294/1‑94 (MQ=60)
TGTTTGCAAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGA < SRR4302540.4522424/94‑1 (MQ=60)
GTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGGGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGCCGAC > SRR4302540.4082759/1‑94 (MQ=60)
GTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGAC > SRR4302540.7384967/1‑94 (MQ=60)
GTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGAC > SRR4302540.8962487/1‑94 (MQ=60)
TTGCGAAAC‑AGTCCCGCCGCGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAA < SRR4302540.3699399/94‑1 (MQ=60)
TGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAAT < SRR4302540.5325530/94‑1 (MQ=60)
TGCGAAAC‑ACTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATAAGTAATGCCCTGACCTTCAATATGCCGGGCGACAAT < SRR4302540.1862600/94‑1 (MQ=60)
CGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGT > SRR4302540.2000522/1‑94 (MQ=60)
CGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGT > SRR4302540.426954/1‑94 (MQ=60)
GAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTC > SRR4302540.4586934/1‑94 (MQ=60)
AAAC‑AGTCCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCC < SRR4302540.1333757/94‑1 (MQ=60)
AACAAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCC < SRR4302540.3214794/94‑1 (MQ=60)
AAC‑AGTTCCGCCCCGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCG < SRR4302540.3014642/94‑1 (MQ=60)
AAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCG > SRR4302540.3767188/1‑94 (MQ=60)
AC‑AGTCCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGC < SRR4302540.2720206/94‑1 (MQ=60)
C‑AGTTCCGCCACGCCCGGTGGCATACAAGAGCCCCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCC < SRR4302540.2173910/94‑1 (MQ=60)
C‑AGTCCCGCCACGCCCGGTTGCATACAAGAGCCGCCCCCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCC < SRR4302540.1580739/94‑1 (MQ=60)
C‑ACTTCCACCACGCCCGGTGGAATACAAGACCCGCACGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCC < SRR4302540.7484336/94‑1 (MQ=60)
AGTTCCGCCACGCCCGGTTGCATACGAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCA > SRR4302540.3746213/1‑94 (MQ=60)
AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCA > SRR4302540.8450117/1‑94 (MQ=60)
AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCA > SRR4302540.1770567/1‑94 (MQ=60)
AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCA > SRR4302540.8450116/1‑94 (MQ=60)
AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCA > SRR4302540.1205723/1‑94 (MQ=60)
AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGACCTGCCCTTCAATATGCCTGGCGATACTGTCCGCCA > SRR4302540.1770566/1‑94 (MQ=60)
AGCTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCA < SRR4302540.306862/94‑1 (MQ=60)
GTTCCGCCCCGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCAT < SRR4302540.8494134/94‑1 (MQ=60)
GTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCAT > SRR4302540.5893295/1‑94 (MQ=60)
tcccctccgccgggcTGCATACAAGAGCCGCCCGCCTGCCACAAATCAGTAATGCCCTGCCCTTCAATATGCCGGTCGACAATGTCCGCCATTT < SRR4302540.7868119/79‑1 (MQ=60)
CGCCCCGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTT < SRR4302540.4520930/94‑1 (MQ=60)
CCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTT < SRR4302540.4588953/94‑1 (MQ=60)
CCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTC < SRR4302540.3440270/94‑1 (MQ=60)
CAACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTC < SRR4302540.9330223/94‑1 (MQ=60)
CCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACA < SRR4302540.4930763/94‑1 (MQ=60)
CCCGGTGGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACA < SRR4302540.9296907/94‑1 (MQ=60)
CGGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACAC < SRR4302540.2322567/94‑1 (MQ=60)
CCTGTTGCATACAAGAGCCCCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACAC < SRR4302540.803871/94‑1 (MQ=60)
CGGTTGCATAAAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACC < SRR4302540.230718/94‑1 (MQ=60)
GGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCG > SRR4302540.10117281/1‑94 (MQ=60)
GGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCG > SRR4302540.7856146/1‑94 (MQ=60)
GGTTGCATAAAAGACCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCG < SRR4302540.5510533/94‑1 (MQ=60)
GTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGCCAATGTCCGCCATTTTTTCGTACACCGG > SRR4302540.8888359/1‑94 (MQ=60)
CTTGCATAAAAGAGCCCCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGG < SRR4302540.1062531/94‑1 (MQ=60)
ttcaATACAAGAGCCCCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGT < SRR4302540.3554448/90‑1 (MQ=60)
TTTCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGT < SRR4302540.6462776/94‑1 (MQ=60)
TGCAAACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTT < SRR4302540.7250224/94‑1 (MQ=60)
cagcCAAGAGCCCCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTC < SRR4302540.7054979/90‑1 (MQ=60)
TACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCAC > SRR4302540.7563455/1‑94 (MQ=60)
ACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACC < SRR4302540.509282/94‑1 (MQ=60)
CAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCG > SRR4302540.837470/1‑94 (MQ=60)
AAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCG < SRR4302540.1486696/94‑1 (MQ=60)
AGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCA < SRR4302540.4854637/94‑1 (MQ=60)
AGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCA > SRR4302540.1116507/1‑94 (MQ=60)
AGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCA > SRR4302540.9574225/1‑94 (MQ=60)
AAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAG < SRR4302540.1059144/94‑1 (MQ=60)
GCCGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGC > SRR4302540.202230/1‑94 (MQ=60)
CGCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCA < SRR4302540.970367/94‑1 (MQ=60)
GCCCGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAA > SRR4302540.9041732/1‑94 (MQ=60)
CCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCCCAGCCCAAA > SRR4302540.9455682/1‑94 (MQ=60)
CCGCCAGCCATAAATCAGTAATGCTCCGCCCTTGAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAAT > SRR4302540.1266252/1‑94 (MQ=60)
CCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAAT > SRR4302540.3601079/1‑94 (MQ=60)
CGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATC < SRR4302540.7407619/94‑1 (MQ=60)
CGCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATC > SRR4302540.417210/1‑94 (MQ=60)
CGCCAGCCATAAATCAGTAATGCCCCGCCCGTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATC < SRR4302540.6874794/94‑1 (MQ=60)
GCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCCGGCCAAATCT > SRR4302540.3229305/1‑94 (MQ=60)
CCCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCT < SRR4302540.5162561/94‑1 (MQ=60)
CCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTC > SRR4302540.8675776/1‑94 (MQ=60)
CCAGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGCGCGACAATGTCCGGCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTC > SRR4302540.8594122/1‑94 (MQ=60)
AGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTT > SRR4302540.8340116/1‑94 (MQ=60)
AGCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTT > SRR4302540.1204720/1‑94 (MQ=60)
GCCATAAATCAGTGATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTC < SRR4302540.4905826/94‑1 (MQ=60)
GCCATAAATCAGTGATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTC < SRR4302540.4905827/94‑1 (MQ=60)
GCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTC < SRR4302540.8332988/94‑1 (MQ=60)
GCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCGGGCCAAATCTCTTC < SRR4302540.2690175/94‑1 (MQ=60)
GCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTC > SRR4302540.7431431/1‑94 (MQ=60)
GCCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTC > SRR4302540.9537735/1‑94 (MQ=60)
CCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCA < SRR4302540.5140217/94‑1 (MQ=60)
CCATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCA < SRR4302540.4725499/94‑1 (MQ=60)
CATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCAC < SRR4302540.6502399/94‑1 (MQ=60)
CATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCACATCTCTTCAC > SRR4302540.1317772/1‑94 (MQ=60)
CATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCAC > SRR4302540.9215658/1‑94 (MQ=60)
CATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCAC < SRR4302540.5907648/94‑1 (MQ=60)
ATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACC > SRR4302540.7890845/1‑94 (MQ=60)
ATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACC < SRR4302540.2991696/94‑1 (MQ=60)
ATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACC < SRR4302540.4206960/94‑1 (MQ=60)
ATAAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACC < SRR4302540.8394552/94‑1 (MQ=60)
AAATCAGTAATGCCCTGCCCTTCAATATGCCGGCCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGT < SRR4302540.9784204/94‑1 (MQ=60)
AAATCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGT < SRR4302540.1169642/94‑1 (MQ=60)
AATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTG < SRR4302540.5689711/94‑1 (MQ=60)
acgGTAATGCCCCACCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGAC < SRR4302540.3570482/91‑1 (MQ=60)
TCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGAC < SRR4302540.5509407/94‑1 (MQ=60)
TCAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGAC < SRR4302540.755717/94‑1 (MQ=60)
CAGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACC < SRR4302540.7737243/94‑1 (MQ=60)
AGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCG > SRR4302540.1450854/1‑94 (MQ=60)
AGTAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCG > SRR4302540.6700603/1‑94 (MQ=60)
TAATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCG > SRR4302540.3690455/1‑94 (MQ=60)
AATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGC < SRR4302540.8049012/94‑1 (MQ=60)
AATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGC > SRR4302540.7599009/1‑94 (MQ=60)
AATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGC > SRR4302540.7599010/1‑94 (MQ=60)
ATGCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCT < SRR4302540.1481397/94‑1 (MQ=60)
GCCCTGCCCTTCAAGATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTG < SRR4302540.5239206/94‑1 (MQ=60)
GCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTG > SRR4302540.8383242/1‑94 (MQ=60)
GCCCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTG > SRR4302540.6267600/1‑94 (MQ=60)
CCCTGCCCTTCAATATGCCGGGCGCCAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGC > SRR4302540.278499/1‑94 (MQ=60)
CCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGT > SRR4302540.6607307/1‑94 (MQ=60)
CCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGT > SRR4302540.7960282/1‑94 (MQ=60)
CCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGGGCTTGTA > SRR4302540.3350383/1‑94 (MQ=60)
CCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTA > SRR4302540.797207/1‑94 (MQ=60)
CCCGCCTTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTCCCCCGGTTTCCCCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTA < SRR4302540.2147770/94‑1 (MQ=60)
CCCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTA > SRR4302540.2604456/1‑94 (MQ=60)
CTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTAC > SRR4302540.3738159/1‑94 (MQ=60)
CCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTCCACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTAC < SRR4302540.4951027/94‑1 (MQ=60)
CCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTAC < SRR4302540.2141774/94‑1 (MQ=60)
CCGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTAC < SRR4302540.8683186/94‑1 (MQ=60)
CGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTACT < SRR4302540.4642259/94‑1 (MQ=60)
CGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTACT > SRR4302540.10001578/1‑94 (MQ=60)
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TGCACCTGTAACGCCGGGAATTGTTTGCGAAAC‑AGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTACT > NC_000913/2567606‑2567792
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
