Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGG > NC_000913/2680084‑2680270
|
CGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CC < SRR4302540.4703958/94‑1 (MQ=60)
GGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCC > SRR4302540.4943968/1‑94 (MQ=60)
AGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTT < SRR4302540.9941052/94‑1 (MQ=60)
AGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTC > SRR4302540.6773035/1‑94 (MQ=60)
GCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACCCCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTC < SRR4302540.2151310/94‑1 (MQ=60)
ATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACT < SRR4302540.8916411/94‑1 (MQ=60)
ATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACT < SRR4302540.1141644/94‑1 (MQ=60)
ATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTG > SRR4302540.1523350/1‑94 (MQ=60)
TGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTG < SRR4302540.4761747/94‑1 (MQ=60)
TGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACAACGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TA‑CCCCC‑‑CCTTTCACGG > SRR4302540.547652/1‑94 (MQ=60)
GGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCC > SRR4302540.6851859/1‑94 (MQ=60)
GGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACCCCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCC < SRR4302540.8571282/94‑1 (MQ=60)
GGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCC < SRR4302540.2936543/94‑1 (MQ=60)
GGGAAAGCGGAAGAGGCCCGTTTGCCGTGATCAAACCCCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCG < SRR4302540.3594755/94‑1 (MQ=60)
GGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACCCCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCG < SRR4302540.9762861/94‑1 (MQ=60)
GGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACCCCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGG < SRR4302540.6192631/94‑1 (MQ=60)
GGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCG > SRR4302540.6916806/1‑94 (MQ=60)
GAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGG < SRR4302540.9130422/94‑1 (MQ=60)
AAAGCGGAGGCGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGG < SRR4302540.2415270/94‑1 (MQ=60)
AAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGG < SRR4302540.2830420/94‑1 (MQ=60)
AGCGGAGACGGCCCTTTTGCCGTGATCAAACACCGCCGTTACATCCGGGGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTT < SRR4302540.7797996/94‑1 (MQ=60)
AGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTT > SRR4302540.9713873/1‑94 (MQ=60)
AGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTG < SRR4302540.7437876/94‑1 (MQ=60)
agcgagacgcgccgtttcgctgaatcaacccCCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTG < SRR4302540.2675141/63‑1 (MQ=60)
GGGAGACGGCCTGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGG < SRR4302540.8950893/94‑1 (MQ=60)
CGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGC < SRR4302540.4089367/94‑1 (MQ=60)
AGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCC > SRR4302540.3059709/1‑94 (MQ=60)
AGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCA > SRR4302540.8335392/1‑94 (MQ=60)
GACGGCCCGTTTGCCGTGATCAACCACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCA < SRR4302540.4283051/94‑1 (MQ=60)
ACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TCCCCCCC‑‑CCTTTCCCTGCCGGGTTGcccgc > SRR4302540.5502600/1‑89 (MQ=60)
ACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGGTGGCCCAC > SRR4302540.5502595/1‑94 (MQ=60)
CGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGACCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACC > SRR4302540.1851735/1‑94 (MQ=60)
GGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCAC < SRR4302540.6210194/94‑1 (MQ=60)
CCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACA > SRR4302540.4195904/1‑94 (MQ=60)
CCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACCA > SRR4302540.4385138/1‑94 (MQ=60)
CCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAA > SRR4302540.279114/1‑94 (MQ=60)
CCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAA > SRR4302540.8322041/1‑94 (MQ=60)
CGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAG > SRR4302540.6606892/1‑94 (MQ=60)
GTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGA > SRR4302540.4209570/1‑94 (MQ=60)
GTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAA > SRR4302540.9014100/1‑94 (MQ=60)
GTTTGCCGTGATCAAACACCGCCGTTACATACGGCGGGAAGACGCTCTGATGACCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGCGTTGGTCCACCACAAGAA > SRR4302540.653859/1‑94 (MQ=60)
TTTGCCGTGATCAACCACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TCCCCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGA < SRR4302540.3626701/94‑1 (MQ=60)
TTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAA > SRR4302540.6524305/1‑94 (MQ=60)
TGCCGTGATCAACCACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAAT < SRR4302540.58569/94‑1 (MQ=60)
TGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATG > SRR4302540.9152432/1‑94 (MQ=60)
TGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATG < SRR4302540.5183882/94‑1 (MQ=60)
CCTTGATCAAACCCCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGA < SRR4302540.9638228/94‑1 (MQ=60)
CCGTGATCAACCCCCTCCGTTACATCCTGGGGAAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGAC < SRR4302540.1804116/94‑1 (MQ=60)
CCGTGATCAAACCCCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGA < SRR4302540.3209875/94‑1 (MQ=60)
CCGTGATCAAACCCCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGAC < SRR4302540.3447345/94‑1 (MQ=60)
CCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCTGGTTGGCCCACCACAAGAAATGAC > SRR4302540.7079014/1‑94 (MQ=60)
CGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACG > SRR4302540.7644407/1‑94 (MQ=60)
GTGATCAACCACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACG < SRR4302540.3862950/94‑1 (MQ=60)
GTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACG > SRR4302540.7128375/1‑94 (MQ=60)
GTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGC > SRR4302540.3899152/1‑94 (MQ=60)
GTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGC > SRR4302540.3899151/1‑94 (MQ=60)
GTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGC > SRR4302540.445710/1‑94 (MQ=60)
GTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGC > SRR4302540.7365733/1‑94 (MQ=60)
TGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGC < SRR4302540.6640801/94‑1 (MQ=60)
TGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGC < SRR4302540.6597457/94‑1 (MQ=60)
GATCAAACCCCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCG < SRR4302540.379639/94‑1 (MQ=60)
GATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGG > SRR4302540.7894899/1‑94 (MQ=60)
GATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGG < SRR4302540.5596175/94‑1 (MQ=60)
ATCAAACAACGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGC > SRR4302540.1060174/1‑94 (MQ=60)
CAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCG > SRR4302540.6369971/1‑94 (MQ=60)
CAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGT > SRR4302540.1113223/1‑94 (MQ=60)
AAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGT > SRR4302540.5876925/1‑94 (MQ=60)
AAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGG > SRR4302540.7748001/1‑94 (MQ=60)
ACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGG > SRR4302540.5700184/1‑94 (MQ=60)
ACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGC < SRR4302540.8880043/94‑1 (MQ=60)
CGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTT < SRR4302540.1709033/94‑1 (MQ=60)
CGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTT > SRR4302540.3993931/1‑94 (MQ=60)
CGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTC > SRR4302540.6722673/1‑94 (MQ=60)
GCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TCCCCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGGGGCGTGGCGTT > SRR4302540.1587873/1‑94 (MQ=60)
GCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTC > SRR4302540.1510384/1‑94 (MQ=60)
GTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCG > SRR4302540.8183444/1‑94 (MQ=60)
GTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCG > SRR4302540.800239/1‑94 (MQ=60)
TTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTT < SRR4302540.4767905/94‑1 (MQ=60)
TACATCCGGCGGGAAGACGGTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTT < SRR4302540.1047012/94‑1 (MQ=60)
TACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTT < SRR4302540.1047013/94‑1 (MQ=60)
CATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATA > SRR4302540.9600963/1‑94 (MQ=60)
ATCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATA < SRR4302540.6143201/94‑1 (MQ=60)
TCCGGCGGGAAGACGCTCTGATGCCCTC‑C‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAG < SRR4302540.9090435/94‑1 (MQ=60)
TCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAG > SRR4302540.1154970/1‑94 (MQ=60)
CCCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAG < SRR4302540.5082492/94‑1 (MQ=60)
CCGGCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGA > SRR4302540.2945733/1‑94 (MQ=60)
CCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGAC > SRR4302540.6193737/1‑94 (MQ=60)
CCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGAC < SRR4302540.1749161/94‑1 (MQ=60)
CCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTGCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGAC < SRR4302540.1058785/94‑1 (MQ=60)
GCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGC < SRR4302540.4219889/94‑1 (MQ=60)
GCGGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGC < SRR4302540.2395243/94‑1 (MQ=60)
GCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCG < SRR4302540.3006365/94‑1 (MQ=60)
CGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGG > SRR4302540.5430220/1‑94 (MQ=60)
GGGAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGG > SRR4302540.2911983/1‑94 (MQ=60)
GAAGACGCTCTGATGCCCT‑‑TCCCCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGC > SRR4302540.2750392/1‑94 (MQ=60)
GAAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGTGTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCT < SRR4302540.7542300/94‑1 (MQ=60)
AAGACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATTACGCGGCGTGGCGTTCCCGTTATAGACGCGGGTG > SRR4302540.7517145/1‑94 (MQ=60)
AAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGG > SRR4302540.3721632/1‑94 (MQ=60)
AAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGG > SRR4302540.2293953/1‑94 (MQ=60)
AGACGCTCTGATGCCCT‑‑TCCCCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGCCTCGGCTG > SRR4302540.2588622/1‑94 (MQ=60)
GACGCTCTGATGCCCT‑‑TCCCCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCTCAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGG < SRR4302540.9370927/94‑1 (MQ=60)
GACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGC > SRR4302540.8939301/1‑94 (MQ=60)
ACGCTCTGATGCCCTC‑C‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCG < SRR4302540.7516092/94‑1 (MQ=60)
ACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCG > SRR4302540.7962767/1‑94 (MQ=60)
ACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCG < SRR4302540.6124939/94‑1 (MQ=60)
ACGCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCG > SRR4302540.7962764/1‑94 (MQ=60)
CGCTCTGATGCCCT‑‑TCCCCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCG < SRR4302540.6690141/94‑1 (MQ=60)
GCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCGGTTATAGACGCGGCTGGCGAT > SRR4302540.5957291/1‑94 (MQ=60)
GCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGAT > SRR4302540.338448/1‑94 (MQ=60)
GCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGAT < SRR4302540.1519042/94‑1 (MQ=60)
GCTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGAT > SRR4302540.4713462/1‑94 (MQ=60)
GCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATT < SRR4302540.1064241/94‑1 (MQ=60)
CTCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATT > SRR4302540.5363842/1‑94 (MQ=60)
CTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTT < SRR4302540.2184335/94‑1 (MQ=60)
TCTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTT < SRR4302540.79627/94‑1 (MQ=60)
CTGATGCCCT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGGTGGCCCACCACAAGAAATGACGCGGCGTGGCGGTCCCGTTATAGACGCCGCTGGCGATTTC > SRR4302540.573169/1‑94 (MQ=60)
CTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCC > SRR4302540.646629/1‑94 (MQ=60)
GCTGCCCT‑‑C‑‑CCCCCCTCCTTTCACTGCGTGGTGGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCGGGCGATTTCC < SRR4302540.270285/94‑1 (MQ=60)
GATGCCCTCCC‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCC < SRR4302540.270286/94‑1 (MQ=60)
ATGCCCTC‑C‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAG < SRR4302540.2930094/94‑1 (MQ=60)
TGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCG < SRR4302540.4964388/94‑1 (MQ=60)
CCT‑‑TCCCCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGC > SRR4302540.9809681/1‑94 (MQ=60)
CCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAAAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCG > SRR4302540.1602660/1‑94 (MQ=60)
CT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCG < SRR4302540.7527623/94‑1 (MQ=60)
CT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCC > SRR4302540.6032640/1‑94 (MQ=60)
CT‑‑TC‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCAG > SRR4302540.8939500/1‑94 (MQ=60)
T‑‑C‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCC < SRR4302540.3768109/94‑1 (MQ=60)
ttcCCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGC < SRR4302540.6768325/91‑1 (MQ=60)
ttcCCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGC < SRR4302540.10081810/91‑1 (MQ=60)
T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCC < SRR4302540.9578569/94‑1 (MQ=60)
C‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCC < SRR4302540.7438510/94‑1 (MQ=60)
C‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCC < SRR4302540.2445896/94‑1 (MQ=60)
CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCG < SRR4302540.9920227/94‑1 (MQ=60)
CC‑‑CCTTTCACTGCCGGGTGGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTC < SRR4302540.4417665/94‑1 (MQ=60)
C‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCA < SRR4302540.8075793/94‑1 (MQ=60)
C‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCA < SRR4302540.6335482/94‑1 (MQ=60)
C‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCA < SRR4302540.810100/94‑1 (MQ=60)
C‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCA > SRR4302540.5932135/1‑94 (MQ=60)
C‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCCCCCGGTac > SRR4302540.2578616/1‑92 (MQ=60)
CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAG < SRR4302540.9484715/94‑1 (MQ=60)
CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAG < SRR4302540.5793721/94‑1 (MQ=60)
CTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGG > SRR4302540.1884442/1‑94 (MQ=60)
CTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGG < SRR4302540.8577668/94‑1 (MQ=60)
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CGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCT‑‑T‑‑CCCCC‑‑CCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGG > NC_000913/2680084‑2680270
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
