Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
A0 F0 I1 R1
|
245 |
579.6 |
28867798 |
97.7% |
28203838 |
96.0 |
Breseq alignment
BRESEQ :: Evidence
|
evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
RA |
NC_000913 |
4,008,491 |
2 bp→CG |
intergenic (+58/‑174) |
b4555 → / → yigM |
hypothetical protein/hypothetical protein |
|
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
* | NC_000913 | 4,008,491 | 0 | G | C | 99.5%
| 1600.4
/ NA
| 435 | intergenic (+58/‑175) | b4555/yigM | hypothetical protein/hypothetical protein |
Reads supporting (aligned to +/- strand): ref base G (1/1); new base C (194/238); total (196/239) |
Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
* | NC_000913 | 4,008,492 | 0 | C | G | 100.0%
| 1612.1
/ NA
| 428 | intergenic (+59/‑174) | b4555/yigM | hypothetical protein/hypothetical protein |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (195/233); total (195/233) |
Only 100 of 462 total aligned reads displayed.
GGCTACAGCTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑C‑GG‑G‑‑AAA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTA > NC_000913/4008403‑4008580
||
cagccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCgcacca < 2:6322331/92‑1 (MQ=255)
agccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAg < 1:9290859/93‑1 (MQ=255)
gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGc > 1:3561769/3‑96 (MQ=255)
gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑C‑GG‑GGCAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGc > 2:3006521/3‑96 (MQ=255)
ccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCg > 1:5733034/2‑96 (MQ=255)
ccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCg > 1:4988502/2‑96 (MQ=255)
cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGt > 2:9355629/1‑96 (MQ=255)
cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGCGCGCACCAGCGt > 1:11378010/1‑96 (MQ=255)
cTGAAGGAATGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGt > 1:6490533/1‑96 (MQ=255)
tGAAGGTTTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCC‑GG‑C‑‑AAAGG‑CTGCATTATGGGCAGTGAGCACCAGCGTc > 1:10000040/1‑96 (MQ=255)
tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc > 1:10854513/1‑96 (MQ=255)
ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGaa > 1:6141413/1‑96 (MQ=255)
tttggtgACGGGATGAACGCCGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCTCCAGCGTCTGAAAGACCTTCATccc < 2:3506327/92‑1 (MQ=255)
tttggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATccc < 2:4703266/92‑1 (MQ=255)
ttggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCg < 1:14114330/93‑1 (MQ=255)
ttggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CGGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCg > 2:667754/4‑96 (MQ=255)
ctggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCg > 1:8869207/4‑96 (MQ=255)
tggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcccta < 1:2979521/94‑3 (MQ=255)
tggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGa > 1:13187070/3‑96 (MQ=255)
gtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGc < 1:7038455/96‑1 (MQ=255)
tgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑t < 2:4543996/96‑1 (MQ=255)
tgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑C‑GGTG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCATCGTCTGCAAGACCTTCATCCCGAGC‑t > 1:6961764/1‑96 (MQ=255)
gACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑g > 1:12337876/1‑96 (MQ=255)
cGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑gga > 1:2747296/1‑94 (MQ=255)
gggATGAACGAGGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑ggaa > 2:14237029/1‑93 (MQ=255)
gggATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑ggaa < 1:9130859/96‑4 (MQ=255)
gggATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑ggaa < 2:10508543/96‑4 (MQ=255)
gggATGAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑ggaa > 2:2391646/1‑93 (MQ=255)
gAACGACGCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGAt > 2:9542865/1‑96 (MQ=255)
acgacgCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTg < 1:13336172/96‑1 (MQ=255)
cgacgCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTgg > 2:3437713/1‑96 (MQ=255)
cgacgCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTga < 1:13792932/96‑2 (MQ=255)
gccgCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGt < 2:13414290/94‑1 (MQ=255)
gacgCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGt < 1:524372/96‑1 (MQ=255)
gacgCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGt > 2:13565387/1‑96 (MQ=255)
acgCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTa > 1:6395801/1‑96 (MQ=255)
acgCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTa > 2:198522/1‑96 (MQ=255)
gCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACt < 2:4288595/96‑1 (MQ=255)
gCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACt < 1:1999619/96‑1 (MQ=255)
gCCGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCACCCCGGGC‑TGGAAGTGATTGGTACt < 1:4551446/96‑1 (MQ=255)
ccGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGATGTGATTGGTACTa > 2:4844077/1‑96 (MQ=255)
cGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAGGTGATTGGTACTaa > 1:5445168/1‑96 (MQ=255)
cGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTaa < 2:5827692/96‑1 (MQ=255)
cGAAATGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCAATATGGGAAGTGCGCACAAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGtaataa > 1:98990/1‑96 (MQ=255)
cGAAATGCTGTCGAG‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTaa > 1:5114308/1‑96 (MQ=255)
aaaTGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATg > 2:13125727/1‑96 (MQ=255)
aaaTGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATg > 1:4869010/1‑96 (MQ=255)
aaaTGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATg < 1:11681880/96‑1 (MQ=255)
aTGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGcc < 2:11831566/96‑1 (MQ=255)
aTGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGcc < 2:1212676/96‑1 (MQ=255)
aTGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGcc < 1:7967824/96‑1 (MQ=255)
tGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcg < 1:10492689/96‑1 (MQ=255)
tGCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcg < 2:8611170/96‑1 (MQ=255)
ggtGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcga > 1:7521313/3‑96 (MQ=255)
gCTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcga < 2:784704/96‑1 (MQ=255)
cTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcgac < 1:1902855/96‑1 (MQ=255)
cTGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcgac > 1:6755947/1‑96 (MQ=255)
cTGTCGAT‑GC‑AGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcgac < 1:2393129/96‑1 (MQ=255)
tGTCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGGGATTGGGACTAATGCcgacg > 2:4132733/1‑96 (MQ=255)
gTCGATGGG‑G‑GG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcgacga > 1:4671930/1‑96 (MQ=255)
tCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCgacgac < 2:10162357/96‑1 (MQ=255)
tCGAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCgacgac > 1:4409288/1‑96 (MQ=255)
gAT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGAcgc > 2:9173504/1‑96 (MQ=255)
aT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATTGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGGGC‑TGGAAGTGATTGGTACTAATGCCGACGAcgcg > 2:12291817/1‑96 (MQ=255)
aT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGAcgcg > 2:8359228/1‑96 (MQ=255)
aT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAAACCTTCATCCCGAGC‑TGGAAGGGATTGGTACTAATGGCGGCGAcgcg > 1:3960574/1‑96 (MQ=255)
aT‑GG‑CGGG‑G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGCCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGAcgcg > 2:7091006/1‑96 (MQ=255)
aT‑GG‑CGGG‑G‑‑AAA‑GTCTGCATTATGGGCAGTGCGCCCCAGCGTCTGAACGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGAcgcg < 2:12519757/96‑1 (MQ=255)
ggg‑g‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGcc > 2:7465530/2‑96 (MQ=255)
ggg‑g‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGcc > 1:3224311/2‑96 (MQ=255)
g‑g‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCTTCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGATGCCGc > 2:12783958/1‑96 (MQ=255)
g‑g‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGc > 2:3275642/1‑96 (MQ=255)
aaagg‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAt > 1:3852446/5‑96 (MQ=255)
aaagg‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAt > 2:10913418/5‑96 (MQ=255)
aagg‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGCTTGGTACTAATGCCGACGACGCGGTGCCGCAtt < 2:14066289/93‑1 (MQ=255)
aagg‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAtt > 2:2782277/4‑96 (MQ=255)
agg‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTa < 2:5166531/94‑1 (MQ=255)
agg‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTa > 2:9738272/3‑96 (MQ=255)
g‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc < 2:6141413/96‑1 (MQ=255)
tcTGCATTATGGGCAGTGCGCACCAGCGACTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc < 1:12248005/95‑1 (MQ=255)
cTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCt > 1:9627120/1‑96 (MQ=255)
cTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCt > 1:7229577/1‑96 (MQ=255)
tGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTg < 2:11461145/96‑1 (MQ=255)
tGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTg < 2:6507775/96‑1 (MQ=255)
gCATTATGGGCAGTGCGCCCCAGCGTCTGAAAGACCTTCATCCCGTGCGG‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc < 1:4245751/96‑1 (MQ=255)
gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc < 2:9200765/96‑1 (MQ=255)
cATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCg < 1:12681184/96‑1 (MQ=255)
aTTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGt < 2:5005219/96‑1 (MQ=255)
aTTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGt < 2:5482252/96‑1 (MQ=255)
ttATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTa < 1:11990528/96‑1 (MQ=255)
aTGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATTTGCGTaaa < 2:12971223/96‑1 (MQ=255)
aTGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaaa > 2:11164189/1‑96 (MQ=255)
aTGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaaa < 1:1425508/96‑1 (MQ=255)
tGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAc > 1:8222077/1‑96 (MQ=255)
gggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGCCGACGCGGTGCGGCATTATGTGCGTaagtg > 1:10237775/1‑93 (MQ=255)
gggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAct < 2:3907276/96‑1 (MQ=255)
gggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAct > 2:1678771/1‑96 (MQ=255)
ggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAActc > 2:682961/1‑96 (MQ=255)
ggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAActc < 2:9621549/96‑1 (MQ=255)
gCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAActct > 2:760669/1‑96 (MQ=255)
||
GGCTACAGCTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GG‑C‑GG‑G‑‑AAA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTA > NC_000913/4008403‑4008580
|
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
Only 200 of 292 total aligned reads displayed.
GAACT‑GGCTACAG‑CTGAAGGATT‑G‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑G‑‑AAA‑‑G‑CTGCATTATGGGCAGTGGC‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATC > NC_000913/4008398‑4008586
|
aaactgGGCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGC > SRR4302518.5804999/7‑101 (MQ=60)
aaactgGGCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGC < SRR4302518.7027038/95‑1 (MQ=60)
AACTGGGCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTNNN > SRR4302518.14097003/1‑101 (MQ=56)
GGCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCA < SRR4302518.5751923/101‑1 (MQ=58)
nnnacagcCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAG < SRR4302518.9739056/93‑1 (MQ=60)
GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAG > SRR4302518.4010129/1‑101 (MQ=56)
nnncagcCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGC < SRR4302518.13842606/94‑1 (MQ=60)
nnnagcCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCG < SRR4302518.14124532/95‑1 (MQ=59)
ACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGGCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGT > SRR4302518.4245254/1‑101 (MQ=47)
aagcCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCNNN > SRR4302518.11867277/5‑101 (MQ=58)
agcCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGNNN > SRR4302518.8457010/4‑101 (MQ=57)
gcCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑CGGGG‑G‑‑AAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGGCTG > SRR4302518.3728394/3‑101 (MQ=57)
C‑CTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCNNN > SRR4302518.14943133/1‑101 (MQ=60)
cctgaaggtttgtattgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGA > SRR4302518.6272478/24‑101 (MQ=60)
CTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAA > SRR4302518.4965661/1‑101 (MQ=60)
CTGAAGGAAT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAA > SRR4302518.6822864/1‑101 (MQ=60)
TGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGNNN > SRR4302518.11363911/1‑101 (MQ=60)
TGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGACA > SRR4302518.4892487/1‑101 (MQ=60)
TGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAA > SRR4302518.815220/1‑101 (MQ=60)
TGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGC‑GAGGCGCACCAGCGGCTGAAA > SRR4302518.6841188/1‑101 (MQ=45)
TAAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGNNN > SRR4302518.11132113/1‑101 (MQ=58)
NNNGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAACG < SRR4302518.11600147/101‑1 (MQ=60)
GAAGGATTGG‑ATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTAGGGGCAGTGCG‑CACCAGCGTCTGANNN > SRR4302518.7711107/1‑101 (MQ=52)
AAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGA < SRR4302518.2537259/101‑1 (MQ=60)
nnngattgtattgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGA < SRR4302518.9809423/82‑1 (MQ=60)
AGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGAC > SRR4302518.1393417/1‑101 (MQ=60)
GGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACC > SRR4302518.6453715/1‑101 (MQ=60)
nnnttgtattgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACC < SRR4302518.13861593/84‑1 (MQ=60)
cgatcttattgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACC < SRR4302518.488831/84‑1 (MQ=60)
GATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGANNN > SRR4302518.9097783/1‑101 (MQ=60)
GATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCT < SRR4302518.1304244/101‑1 (MQ=60)
GATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACAAGCGACTGAAAGACCT > SRR4302518.3925679/1‑101 (MQ=52)
nnntgtattgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCT < SRR4302518.12139123/85‑1 (MQ=60)
ATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTT > SRR4302518.5959733/1‑101 (MQ=60)
ATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTT > SRR4302518.1909594/1‑101 (MQ=60)
TT‑GTATTGCGTTTGGTGACGGAATGAACGACGCAGCAATGCTGTCGATG‑‑G‑C‑‑GG‑G‑‑GAACGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTC < SRR4302518.2523847/101‑1 (MQ=45)
NN‑N‑ATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCA < SRR4302518.7735324/101‑1 (MQ=60)
tggtattgcgtttgGTGACGGGATGAACGCCGCCGAAATGCTGCCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTC < SRR4302518.5770622/87‑1 (MQ=60)
nnntattgcgtttgGTGACGAGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GGCG‑‑AAAG‑G‑CTGCATTATGGGCAGTGCG‑CCCAAGCGTCTGAAAGACCTTC < SRR4302518.10378522/87‑1 (MQ=49)
gtattgcgtttgggGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCATGGTCTGAAAGACATTCAC > SRR4302518.525901/15‑101 (MQ=49)
gtattgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCAT < SRR4302518.7150565/89‑1 (MQ=60)
gtattgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑AACCAGCGTCTGAAAGAACTTNNN > SRR4302518.9018828/13‑101 (MQ=60)
nnntgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCAGC < SRR4302518.12345275/90‑1 (MQ=60)
ATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGGCGATG‑‑G‑T‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGAG‑CACCAGCGCCTGAAAGACCTTCANNN > SRR4302518.8900534/1‑101 (MQ=47)
nnncgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCT < SRR4302518.7548070/92‑1 (MQ=60)
nnncgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCC < SRR4302518.11376776/92‑1 (MQ=60)
nnngtttgGTGACGGGATGAACGCCGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTTCG‑CACCAGCGTCTGAAAGACCTTCATCCCG < SRR4302518.13133813/93‑1 (MQ=60)
nnngtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCG < SRR4302518.14760777/93‑1 (MQ=60)
TGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCNNN > SRR4302518.9644620/1‑101 (MQ=60)
TGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCG < SRR4302518.2772931/101‑1 (MQ=60)
TGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCG < SRR4302518.1471827/101‑1 (MQ=60)
TGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCG < SRR4302518.3326341/101‑1 (MQ=60)
gggtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCTA < SRR4302518.3119552/94‑1 (MQ=60)
GCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑CGGGG‑G‑‑AAG‑‑G‑CTGCATTATGTGGAGGGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGG > SRR4302518.5122529/1‑101 (MQ=58)
CGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAG < SRR4302518.7340205/101‑1 (MQ=60)
CGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAG > SRR4302518.2746015/1‑101 (MQ=60)
CGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGGGCG‑CCCCAGCGTCTGAAAGACCTTCATCCCGGG > SRR4302518.3152411/1‑101 (MQ=60)
CGTTTGGTGACGCGATGAACGACGCCGAAATGCTGTCGATG‑‑GCC‑‑GG‑G‑‑AAAG‑G‑CTGCATTATGGGCAGTGGG‑CACCAGCGTCTGAAAGACCTTCATCCCGAG < SRR4302518.4739818/101‑1 (MQ=60)
nnntgGTGACGGGATGAGCGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGACC < SRR4302518.12020985/96‑1 (MQ=60)
nnntgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC < SRR4302518.7411149/96‑1 (MQ=60)
gtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC > SRR4302518.5656243/6‑101 (MQ=60)
GTTG‑GTGAAGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T < SRR4302518.3894752/101‑1 (MQ=60)
tttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGTGCAGTGAG‑CACCAGTGTCTGAAAGACCGTCATCCCGAGC‑T > SRR4302518.5355796/5‑101 (MQ=60)
tttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGGCTGAAAGACCTTCATCCCGANN‑N > SRR4302518.14670036/5‑101 (MQ=60)
TG‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAccnnn > SRR4302518.13795677/1‑96 (MQ=60)
NN‑‑NTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑GG < SRR4302518.9158314/101‑1 (MQ=60)
ctgGTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGN‑N‑N > SRR4302518.9299252/4‑101 (MQ=60)
G‑‑GTGACGGGATGATCGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGAAGTGCG‑CACCATCGTCTGAAAGACCTTCATCCCGAGC‑T‑GGA < SRR4302518.5008240/101‑1 (MQ=60)
NNNACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑Ggaa < SRR4302518.9571536/101‑4 (MQ=60)
GTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑Ggaa < SRR4302518.5513269/101‑4 (MQ=60)
GTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑Ggaa > SRR4302518.5265102/1‑98 (MQ=60)
TGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GGTG‑‑AAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCATCGTCTGCAAGACCTTCATCCCGAGC‑TGGAAG > SRR4302518.7331645/1‑101 (MQ=60)
TGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑Ggnnn > SRR4302518.7403178/1‑97 (MQ=60)
NNNCGGCATGAACGACGCCGAAATGCTGTCGATC‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CCCCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAG < SRR4302518.10362605/101‑1 (MQ=60)
GACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGT < SRR4302518.87649/101‑1 (MQ=60)
GACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGT < SRR4302518.1536043/101‑1 (MQ=60)
ACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑Ggaannn > SRR4302518.13019759/1‑95 (MQ=60)
CGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGA > SRR4302518.2877628/1‑101 (MQ=60)
CGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑Ggaagnnn > SRR4302518.9107527/1‑94 (MQ=60)
GGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGAT > SRR4302518.6326211/1‑101 (MQ=60)
GGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑Ggaagtnnn > SRR4302518.9552768/1‑93 (MQ=60)
NNNGAACGACGCCGACATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTG < SRR4302518.10936004/101‑1 (MQ=60)
GATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTG < SRR4302518.5459644/101‑1 (MQ=60)
GATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTG < SRR4302518.1398481/101‑1 (MQ=60)
GATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑G‑‑GAACGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAAACCTACATCCCGAtctgagcgtatatg > SRR4302518.1288019/1‑87 (MQ=60)
NNNAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGA < SRR4302518.14424378/101‑1 (MQ=60)
ATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTAATCCCGAGC‑TGGAAGTGATTGG > SRR4302518.4644685/1‑101 (MQ=60)
TGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTNNN > SRR4302518.12916847/1‑101 (MQ=60)
GAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTA < SRR4302518.2014240/101‑1 (MQ=60)
ACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTNNN > SRR4302518.12861262/1‑101 (MQ=60)
ACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACT < SRR4302518.2091570/101‑1 (MQ=60)
ACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACT > SRR4302518.7113379/1‑101 (MQ=60)
ACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACT < SRR4302518.6770456/101‑1 (MQ=60)
GGCGCCGAGATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACNNN > SRR4302518.13572444/1‑101 (MQ=60)
GACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAA < SRR4302518.3632379/101‑1 (MQ=60)
GACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACNNN > SRR4302518.11147132/1‑101 (MQ=60)
GACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGGACTAA > SRR4302518.4093308/1‑101 (MQ=60)
ACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAAT > SRR4302518.5469194/1‑101 (MQ=60)
ACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAAT > SRR4302518.6722507/1‑101 (MQ=60)
NNNCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATG < SRR4302518.12233391/101‑1 (MQ=60)
NNNCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATG < SRR4302518.7523475/101‑1 (MQ=60)
CGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATG > SRR4302518.1552384/1‑101 (MQ=60)
CGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATG > SRR4302518.6064135/1‑101 (MQ=60)
GCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGC > SRR4302518.4594983/1‑101 (MQ=60)
GCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGC < SRR4302518.4897763/101‑1 (MQ=60)
GCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAANNN > SRR4302518.13347721/1‑101 (MQ=60)
GCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGGGATTGGTACTAATGC > SRR4302518.3018926/1‑101 (MQ=60)
nnnatATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCC < SRR4302518.9991138/96‑1 (MQ=60)
NNNAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCC < SRR4302518.10290733/101‑1 (MQ=60)
CCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCC < SRR4302518.3258024/101‑1 (MQ=60)
NNNAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCG < SRR4302518.10983714/101‑1 (MQ=60)
NNNAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCG < SRR4302518.11679583/101‑1 (MQ=60)
CGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAGGTGATTGGTACTAATGCCG > SRR4302518.5722797/1‑101 (MQ=60)
CGAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGAACTAATGNNN > SRR4302518.12171454/1‑101 (MQ=60)
CGAAATGCTGTCGAGG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCG > SRR4302518.5378768/1‑101 (MQ=60)
GAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGA < SRR4302518.4130542/101‑1 (MQ=60)
GAAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGA < SRR4302518.3484464/101‑1 (MQ=60)
NNNTGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGAC < SRR4302518.10006030/101‑1 (MQ=60)
CAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGAC < SRR4302518.1989113/101‑1 (MQ=60)
AAATGCTGTCGATGCAG‑G‑‑GG‑A‑‑AAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGAC < SRR4302518.2509128/101‑1 (MQ=60)
AAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGGAGTGATTGGTACTAATGCCNNN > SRR4302518.10270721/1‑101 (MQ=60)
AAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGAC < SRR4302518.5016247/101‑1 (MQ=60)
AAATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGAC > SRR4302518.5123238/1‑101 (MQ=60)
NNNGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACG < SRR4302518.13375098/101‑1 (MQ=60)
NATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGGCCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACN < SRR4302518.4393938/101‑1 (MQ=60)
ATGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGANNN > SRR4302518.8785197/1‑101 (MQ=60)
NNNTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGCC < SRR4302518.9664730/101‑1 (MQ=60)
NNNTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGAC < SRR4302518.12469742/101‑1 (MQ=60)
AGCTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGAC < SRR4302518.780360/101‑1 (MQ=60)
NNNGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACG < SRR4302518.14662215/101‑1 (MQ=60)
GGTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGNNN > SRR4302518.7907557/1‑101 (MQ=60)
NNNTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGC < SRR4302518.12136847/101‑1 (MQ=60)
CTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGC > SRR4302518.4478301/1‑101 (MQ=60)
CTGTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGC > SRR4302518.2146809/1‑101 (MQ=60)
NNNCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCG < SRR4302518.7546040/101‑1 (MQ=60)
NNNCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCG < SRR4302518.9310370/101‑1 (MQ=60)
GTCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGG < SRR4302518.3748051/101‑1 (MQ=60)
TCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGcg > SRR4302518.4633403/1‑99 (MQ=60)
TCGATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGT < SRR4302518.7256431/101‑1 (MQ=60)
ATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTNNN > SRR4302518.12606193/1‑101 (MQ=60)
ATG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCC < SRR4302518.6954292/101‑1 (MQ=60)
TG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGNNN > SRR4302518.9980757/1‑101 (MQ=60)
TG‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCG > SRR4302518.2833018/1‑101 (MQ=60)
G‑‑G‑C‑‑GG‑GGAAAG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCNNN > SRR4302518.10445951/1‑101 (MQ=60)
nnnatggcggggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGT < SRR4302518.13909747/85‑1 (MQ=60)
nnntggcggggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTG < SRR4302518.7629040/86‑1 (MQ=60)
nnntggcggggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGCG < SRR4302518.11584778/86‑1 (MQ=60)
nnnggggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGC < SRR4302518.14892535/90‑1 (MQ=60)
GG‑G‑‑AAAG‑G‑CTGCATTATGGGCCGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑Ggaagagataggtaatattgacgacgacgcactgcatcannn > SRR4302518.13459906/1‑60 (MQ=45)
GG‑G‑‑AAA‑‑GACTGCATTATGGAGAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGATC‑TGGAAGTGATTGGTACTAATGCCGACGACTCGGTGCCGCATTT > SRR4302518.6838426/1‑101 (MQ=60)
gcggggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCA > SRR4302518.6628485/11‑101 (MQ=60)
gcggggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCA > SRR4302518.5829268/11‑101 (MQ=60)
nnnggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAT < SRR4302518.8410940/92‑1 (MQ=60)
cggggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCatctt > SRR4302518.1950517/10‑96 (MQ=60)
cggggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAT > SRR4302518.494987/10‑101 (MQ=60)
cggggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAT < SRR4302518.582887/92‑1 (MQ=60)
nnngaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATT < SRR4302518.12321775/93‑1 (MQ=60)
nnngaaagG‑CTGCATTATGGGCAGTGCG‑AACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATT < SRR4302518.10713311/93‑1 (MQ=60)
ggggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCNNN > SRR4302518.8626770/9‑101 (MQ=60)
ggggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATT > SRR4302518.3374272/9‑101 (MQ=60)
ggggaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATT < SRR4302518.730304/93‑1 (MQ=60)
G‑‑AAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTGCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTNNN > SRR4302518.10594526/1‑101 (MQ=60)
nnnaaagG‑CTGCATTGTGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTA < SRR4302518.10784925/94‑1 (MQ=60)
nnnaaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTA < SRR4302518.12609820/94‑1 (MQ=60)
nnnaagG‑CTGCATTATGGGAAGTGCG‑CACCAGCGTCTGAAAGGCCTTCAACCCGAGC‑TGGAAGTGATTGGTACTAATGCCGGCGACGCGGTGCCGCATTAT < SRR4302518.7522580/95‑1 (MQ=60)
nnnagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATC < SRR4302518.10450598/96‑1 (MQ=60)
nnnagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATC < SRR4302518.9615685/96‑1 (MQ=60)
gtaagG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATC > SRR4302518.3607397/6‑101 (MQ=60)
NNN‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTG < SRR4302518.8121700/101‑1 (MQ=60)
AAG‑‑G‑CTGCATTATGGGCAGTGCG‑CCCCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTG < SRR4302518.5219618/101‑1 (MQ=60)
AAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCT < SRR4302518.5541774/101‑1 (MQ=60)
AAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCT > SRR4302518.4034811/1‑101 (MQ=60)
nnnagtCTGCATTATGGGCAGTGCG‑CACCAGCGACTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATC < SRR4302518.12827884/95‑1 (MQ=60)
AG‑‑G‑CTGCATTATGGGCAGTGCG‑CCCCAGCGTCTGAAAGACCTTCATCCCGTGCGG‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGC < SRR4302518.4454368/101‑1 (MQ=60)
AG‑‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGC < SRR4302518.474628/101‑1 (MQ=60)
N‑‑N‑NTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCG < SRR4302518.8089005/101‑1 (MQ=60)
N‑NNGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGT < SRR4302518.12790396/101‑1 (MQ=60)
G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGGCGACGCGGTGCCGCATTATCTGCGA > SRR4302518.949206/1‑101 (MQ=60)
G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGT < SRR4302518.206777/101‑1 (MQ=60)
G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACT‑ATGCCGACGACGCGGTGCCGCCTTATCTGCNNN > SRR4302518.13113857/1‑101 (MQ=60)
CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCNNN > SRR4302518.10091654/1‑101 (MQ=60)
CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCNNN > SRR4302518.14896932/1‑101 (MQ=60)
CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTA < SRR4302518.5349756/101‑1 (MQ=60)
CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTA > SRR4302518.4562770/1‑101 (MQ=60)
CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTA < SRR4302518.6534119/101‑1 (MQ=60)
NNNTTATGGGCAGTGCG‑CACCAGCATCTGAAAGACCTTCATCCCGAGC‑TGGTAGTGATTCGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAA < SRR4302518.7838421/101‑1 (MQ=60)
GCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAGGGGATTGTTACTAATGCCGACGACGCGGGGCCGCATTATCTGAGTAAC > SRR4302518.5513178/1‑101 (MQ=60)
GCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAA < SRR4302518.6769606/101‑1 (MQ=60)
CATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGATGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAC > SRR4302518.7294439/1‑101 (MQ=60)
ATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACT < SRR4302518.4277104/101‑1 (MQ=60)
TTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTC > SRR4302518.102064/1‑101 (MQ=60)
ATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTA < SRR4302518.4428465/101‑1 (MQ=60)
ATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTA < SRR4302518.460700/101‑1 (MQ=60)
TGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTAT > SRR4302518.5235902/1‑101 (MQ=60)
TGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCNNN > SRR4302518.8628127/1‑101 (MQ=60)
GGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGCCGACGCGGTGCGGCATTATGTGCGTAAgtgctnnn > SRR4302518.10720780/1‑93 (MQ=60)
GGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATT > SRR4302518.2163897/1‑101 (MQ=60)
NNNGTGGG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTA < SRR4302518.12511577/101‑1 (MQ=60)
CAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTTCCGCATTATCTGCGTAAACTCTATTNNN > SRR4302518.10558866/1‑101 (MQ=60)
AGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATC > SRR4302518.6060164/1‑101 (MQ=60)
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GAACT‑GGCTACAG‑CTGAAGGATT‑G‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATG‑‑G‑C‑‑GG‑G‑‑AAA‑‑G‑CTGCATTATGGGCAGTGGC‑CACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATC > NC_000913/4008398‑4008586
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Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |