Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
672,914 |
C→T |
G365S (GGC→AGC) |
leuS ← |
leucine tRNA synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 672,914 | 0 | C | T | 100.0%
| 736.7
/ NA
| 198 | G365S (GGC→AGC) | leuS | leucine tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (86/112); total (86/112) |
Only 100 of 201 total aligned reads displayed.
CCGCTTCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCCGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATAA > NC_000913/672824‑673003
|
ttCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGc < 1:5032079/93‑1 (MQ=255)
ttCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGc < 2:2754971/93‑1 (MQ=255)
cATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTg < 2:2004093/93‑1 (MQ=255)
aTGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGc > 2:2552088/1‑93 (MQ=255)
ggTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCa < 2:2351840/93‑1 (MQ=255)
ggTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCa > 1:3853542/1‑93 (MQ=255)
gTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAg < 2:569228/93‑1 (MQ=255)
cAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGa < 1:783008/93‑1 (MQ=255)
cAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGa < 2:2085256/93‑1 (MQ=255)
aaGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGAt < 1:3475702/93‑1 (MQ=255)
aGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCCGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATa > 1:4428239/1‑93 (MQ=255)
gACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATaa > 1:4937383/1‑93 (MQ=255)
aCCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAAc < 1:2295197/93‑1 (MQ=255)
ccGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAAcc > 2:1106207/1‑93 (MQ=255)
ccGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAAcc > 2:1254893/1‑93 (MQ=255)
gTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCgg < 2:3618542/93‑1 (MQ=255)
gTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCgg > 2:3861905/1‑93 (MQ=255)
gTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCgg > 2:5019516/1‑93 (MQ=255)
gAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGttt < 1:4911830/93‑1 (MQ=255)
gAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGttt < 1:4599354/93‑1 (MQ=255)
gAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGttt > 1:877113/1‑93 (MQ=255)
aaCTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTg > 2:4238739/1‑93 (MQ=255)
aCTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGa < 2:4383889/93‑1 (MQ=255)
cTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGAt < 2:1742678/93‑1 (MQ=255)
tCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATg < 1:5701795/93‑1 (MQ=255)
tCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATg < 1:3312627/93‑1 (MQ=255)
gCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGtt > 1:3931535/1‑93 (MQ=255)
gCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGtt < 1:4869360/93‑1 (MQ=255)
gCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGtt < 2:5178431/93‑1 (MQ=255)
ccAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTc > 2:3461219/1‑93 (MQ=255)
ccAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTc > 1:6291725/1‑93 (MQ=255)
cAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCATCTGCCAGGATAACCGGTTTGATGTTCa > 1:2871174/1‑93 (MQ=255)
cAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCa > 1:4175167/1‑93 (MQ=255)
cAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCa < 2:701467/93‑1 (MQ=255)
cAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCa < 2:5632506/93‑1 (MQ=255)
gagTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAgg > 2:5376940/1‑93 (MQ=255)
gagTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAgg < 2:4861757/93‑1 (MQ=255)
gagTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAgg < 1:6277144/93‑1 (MQ=255)
ttGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCg < 2:5970677/93‑1 (MQ=255)
aaCAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAt > 2:1341127/1‑93 (MQ=255)
aCAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAtt < 2:1197318/93‑1 (MQ=255)
aCAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAtt > 1:744466/1‑93 (MQ=255)
aCAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAtt > 1:1574878/1‑93 (MQ=255)
cAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAttt < 1:3409036/93‑1 (MQ=255)
cAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAttt < 2:4938819/93‑1 (MQ=255)
aGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTa < 2:3561482/93‑1 (MQ=255)
cACGCCTTTTTCAGTCAGGGCTTGCTGAGCAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTaga < 2:6191455/93‑1 (MQ=255)
cACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTaga < 2:4128695/93‑1 (MQ=255)
cACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTaga < 1:1307846/93‑1 (MQ=255)
cACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTaga < 2:5778633/93‑1 (MQ=255)
aCGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTagag > 1:5197080/1‑93 (MQ=255)
aCGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTagag > 2:2197468/1‑93 (MQ=255)
aCGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTagag < 1:314935/93‑1 (MQ=255)
cGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAgg > 2:5564296/1‑93 (MQ=255)
cGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAgg < 1:4761794/93‑1 (MQ=255)
cGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATATAGAgg < 2:5240108/93‑1 (MQ=255)
gCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGc > 2:2454851/1‑93 (MQ=255)
gCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGc > 2:5905676/1‑93 (MQ=255)
gCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGc < 1:5379841/93‑1 (MQ=255)
ccTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCa > 1:412137/1‑93 (MQ=255)
cTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCaa > 1:605889/1‑93 (MQ=255)
cTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCaa < 1:5149302/93‑1 (MQ=255)
tttttCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCaaa < 1:2101378/93‑1 (MQ=255)
ttttCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAAc < 1:1002679/93‑1 (MQ=255)
ttttCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAAc < 1:6119032/93‑1 (MQ=255)
ttCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTc > 1:3590134/1‑93 (MQ=255)
ttCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTc < 1:929324/93‑1 (MQ=255)
ttCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTc < 1:2475447/93‑1 (MQ=255)
tcagtcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCg < 1:4371572/93‑1 (MQ=255)
agtcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTa > 1:2500480/1‑93 (MQ=255)
agtcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTa < 2:3441521/93‑1 (MQ=255)
agtcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTa < 1:184509/93‑1 (MQ=255)
agtcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTa < 1:3560550/93‑1 (MQ=255)
gtcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAg < 2:8174/93‑1 (MQ=255)
tcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGt < 2:1376644/93‑1 (MQ=255)
tcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGt < 1:1993916/93‑1 (MQ=255)
tcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGt < 2:3996048/93‑1 (MQ=255)
gggCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTcgc > 2:6080850/1‑93 (MQ=255)
gCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCgcgc < 2:6218813/93‑1 (MQ=255)
gCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGGTCAGGCCGTATTTAGAGGCAAACTCGTAGACgcgc > 2:5543630/1‑93 (MQ=255)
cTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCt < 2:735247/93‑1 (MQ=255)
ttGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTg < 1:4998021/93‑1 (MQ=255)
gCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGt < 2:2822634/93‑1 (MQ=255)
gCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAAATCGTAGTCGCGCTggc > 1:1261578/1‑92 (MQ=255)
cTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTc < 2:4116180/93‑1 (MQ=255)
gagaAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGt > 2:1541942/1‑93 (MQ=255)
gagaAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGt < 2:921516/93‑1 (MQ=255)
gaAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGc > 2:5103720/1‑93 (MQ=255)
gaAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGc > 1:1628142/1‑93 (MQ=255)
aaaGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGcc > 1:5079369/1‑93 (MQ=255)
aaGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGccc < 1:686368/93‑1 (MQ=255)
gATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCg < 1:2747044/93‑1 (MQ=255)
tCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGt < 2:4605009/93‑1 (MQ=255)
cTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTa < 1:6208465/93‑1 (MQ=255)
tGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTAc < 2:3307371/93‑1 (MQ=255)
gCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCg > 1:2188944/1‑93 (MQ=255)
tCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGcc > 2:4219265/1‑93 (MQ=255)
tCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGcc > 1:1745338/1‑93 (MQ=255)
gagCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATa < 2:3166016/93‑1 (MQ=255)
agCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATaa > 2:3774989/1‑93 (MQ=255)
|
CCGCTTCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCCGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATAA > NC_000913/672824‑673003
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGCCGCTTCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCCGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATAACTGC > NC_000913/672821‑673007
|
AGGCCGCTTCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCT > SRR4302533.914774/1‑94 (MQ=60)
AGGCCGCTTCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCT > SRR4302533.2338755/1‑94 (MQ=60)
GCCGCTTCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGT > SRR4302533.3226400/1‑94 (MQ=60)
CCGCTGCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTC < SRR4302533.3946475/94‑1 (MQ=60)
GCTTCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAG > SRR4302533.2068034/1‑94 (MQ=60)
TTCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCT < SRR4302533.5062563/94‑1 (MQ=60)
TCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTC > SRR4302533.1280423/1‑94 (MQ=60)
ATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCC < SRR4302533.4437347/94‑1 (MQ=60)
TGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCA > SRR4302533.3877081/1‑94 (MQ=60)
CAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGAT < SRR4302533.787613/94‑1 (MQ=60)
AAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCCGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATA > SRR4302533.4455008/1‑94 (MQ=60)
AAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATA < SRR4302533.3497149/94‑1 (MQ=60)
AGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAA < SRR4302533.1043573/94‑1 (MQ=60)
AGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAA > SRR4302533.4967275/1‑94 (MQ=60)
ACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACC < SRR4302533.2309411/94‑1 (MQ=60)
ACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACC > SRR4302533.881714/1‑94 (MQ=60)
CCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCG > SRR4302533.5590588/1‑94 (MQ=60)
CCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCG > SRR4302533.2135367/1‑94 (MQ=60)
GTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGT < SRR4302533.6328227/94‑1 (MQ=60)
TGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTT > SRR4302533.882263/1‑94 (MQ=60)
GAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTG < SRR4302533.4941584/94‑1 (MQ=60)
GAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTG < SRR4302533.3513824/94‑1 (MQ=60)
GAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTG < SRR4302533.4627218/94‑1 (MQ=60)
ACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGAT < SRR4302533.740579/94‑1 (MQ=60)
ACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGAT > SRR4302533.2695198/1‑94 (MQ=60)
CTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATG < SRR4302533.1514025/94‑1 (MQ=60)
CTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATG < SRR4302533.249565/94‑1 (MQ=60)
TCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGT < SRR4302533.3333082/94‑1 (MQ=60)
TCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGT < SRR4302533.5736227/94‑1 (MQ=60)
CGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTT > SRR4302533.3955538/1‑94 (MQ=60)
GCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTC < SRR4302533.4898866/94‑1 (MQ=60)
GCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTC > SRR4302533.6329241/1‑94 (MQ=60)
CCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCATCTGCCAGGATAACCGGTTTGATGTTCA > SRR4302533.2888840/1‑94 (MQ=60)
CCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCA > SRR4302533.4200467/1‑94 (MQ=60)
CCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCA > SRR4302533.6084173/1‑94 (MQ=60)
CCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCA > SRR4302533.19689/1‑94 (MQ=60)
CCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCA > SRR4302533.3600059/1‑94 (MQ=60)
CAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAG < SRR4302533.278561/94‑1 (MQ=60)
CAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAG < SRR4302533.2227002/94‑1 (MQ=60)
CAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAG > SRR4302533.6215952/1‑94 (MQ=60)
AGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGG > SRR4302533.3145530/1‑94 (MQ=60)
GAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGC < SRR4302533.6314624/94‑1 (MQ=60)
AGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCC > SRR4302533.3425140/1‑94 (MQ=60)
GTTGAACAGCACGCCTTTTTCAGTCAGGTCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCG < SRR4302533.448983/94‑1 (MQ=60)
GTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCG < SRR4302533.1748662/94‑1 (MQ=60)
GTTGAACAGCACGCCTTTTTCAGTAAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCG > SRR4302533.5194115/1‑94 (MQ=60)
TTGAACAGCACGCCTTTTTCAGTCAGGGGTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTATGATGTTCAGGCCGT > SRR4302533.613484/1‑94 (MQ=60)
GAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAT < SRR4302533.3743457/94‑1 (MQ=60)
AACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATT > SRR4302533.1584364/1‑94 (MQ=60)
AACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATT > SRR4302533.748849/1‑94 (MQ=60)
CAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTA < SRR4302533.3430094/94‑1 (MQ=60)
AGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAG > SRR4302533.4693943/1‑94 (MQ=60)
GCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGA < SRR4302533.6246258/94‑1 (MQ=60)
GCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGA < SRR4302533.4900463/94‑1 (MQ=60)
CACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAG < SRR4302533.1315699/94‑1 (MQ=60)
CACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAG < SRR4302533.4794885/94‑1 (MQ=60)
CACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAG > SRR4302533.5228422/1‑94 (MQ=60)
ACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGG < SRR4302533.316857/94‑1 (MQ=60)
ACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGG < SRR4302533.5071120/94‑1 (MQ=60)
ACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGG > SRR4302533.3470135/1‑94 (MQ=60)
CGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGC < SRR4302533.4790679/94‑1 (MQ=60)
CGCCTTGTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGC < SRR4302533.5029048/94‑1 (MQ=60)
GCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCA < SRR4302533.5412164/94‑1 (MQ=60)
GCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCA > SRR4302533.414610/1‑94 (MQ=60)
CCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAA > SRR4302533.609452/1‑94 (MQ=60)
CCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAA > SRR4302533.5002912/1‑94 (MQ=60)
CCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGACAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAA > SRR4302533.4359678/1‑94 (MQ=60)
CTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAA < SRR4302533.5180412/94‑1 (MQ=60)
TTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAAC < SRR4302533.2114337/94‑1 (MQ=60)
TTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACT < SRR4302533.6155935/94‑1 (MQ=60)
TTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACT < SRR4302533.1008534/94‑1 (MQ=60)
TTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTAAGAGATGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACT < SRR4302533.5138831/94‑1 (MQ=60)
TTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTC > SRR4302533.3612234/1‑94 (MQ=60)
TTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCG < SRR4302533.934778/94‑1 (MQ=60)
TTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCG < SRR4302533.2490714/94‑1 (MQ=60)
TCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGT < SRR4302533.4397962/94‑1 (MQ=60)
CAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTA > SRR4302533.2515903/1‑94 (MQ=60)
AGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAG < SRR4302533.4173084/94‑1 (MQ=60)
AGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAG < SRR4302533.3582487/94‑1 (MQ=60)
AGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAG > SRR4302533.4064116/1‑94 (MQ=60)
AGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAG < SRR4302533.185657/94‑1 (MQ=60)
TCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTC < SRR4302533.2326734/94‑1 (MQ=60)
TCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTC < SRR4302533.2006147/94‑1 (MQ=60)
CAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCG < SRR4302533.530810/94‑1 (MQ=60)
CAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCG < SRR4302533.650007/94‑1 (MQ=60)
TTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGG < SRR4302533.5028321/94‑1 (MQ=60)
TGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGT < SRR4302533.771418/94‑1 (MQ=60)
TGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAAATCGTAGTCGCGCTGGC > SRR4302533.1269122/1‑94 (MQ=60)
GAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTG > SRR4302533.4966390/1‑94 (MQ=60)
AGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGC > SRR4302533.1638002/1‑94 (MQ=60)
GAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCC > SRR4302533.5110068/1‑94 (MQ=60)
GAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCC > SRR4302533.1757861/1‑94 (MQ=60)
AAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCC > SRR4302533.1609774/1‑94 (MQ=60)
AAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCC < SRR4302533.690427/94‑1 (MQ=60)
AGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCG > SRR4302533.93453/1‑94 (MQ=60)
GATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGG < SRR4302533.2763885/94‑1 (MQ=60)
CTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTAC < SRR4302533.6245704/94‑1 (MQ=60)
GGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCG > SRR4302533.2202430/1‑94 (MQ=60)
CTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCC > SRR4302533.1755955/1‑94 (MQ=60)
AGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATAAC > SRR4302533.307945/1‑94 (MQ=60)
AGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATAAC > SRR4302533.316618/1‑94 (MQ=60)
GCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATAACT < SRR4302533.1303082/94‑1 (MQ=60)
TGTCAGCTGCCAGGATAACGGGTTTGATGTTCAGGCCGTATTGAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATAACTGC < SRR4302533.363918/94‑1 (MQ=60)
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AGGCCGCTTCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCCGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATAACTGC > NC_000913/672821‑673007
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
