Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
735,021 |
C→T |
A50V (GCC→GTC) |
ybfC → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 735,021 | 0 | C | T | 99.5%
| 791.8
/ NA
| 216 | A50V (GCC→GTC) | ybfC | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (103/112); total (104/112) |
| Fisher's exact test for biased strand distribution p-value = 4.81e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 218 total aligned reads displayed.
ATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGCCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAA > NC_000913/734931‑735110
|
tGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAtg < 1:5003276/93‑1 (MQ=255)
gCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAtgt < 2:3063738/93‑1 (MQ=255)
gCGAAATACAAGCTAAAGATCATGATTGCTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAtgt < 1:672144/93‑1 (MQ=255)
cGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAtgtg < 2:936989/93‑1 (MQ=255)
gAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCGTGTCTTAAATAATAAAGTCATGTgg > 1:4384021/1‑93 (MQ=255)
gAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTgg < 1:4523335/93‑1 (MQ=255)
aaaTACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGga > 1:949724/1‑93 (MQ=255)
aaaTACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGga > 1:510984/1‑93 (MQ=255)
aaTACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGgag > 2:3613013/1‑93 (MQ=255)
cAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATgg > 2:5559899/1‑93 (MQ=255)
gCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTAt > 1:1481354/1‑93 (MQ=255)
cTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATc < 2:3589151/93‑1 (MQ=255)
aaGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGa > 1:1260520/1‑93 (MQ=255)
aGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGaa < 1:4912144/93‑1 (MQ=255)
aGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGaa > 1:2969339/1‑93 (MQ=255)
gATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGGAt > 2:2975351/1‑93 (MQ=255)
aTCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATg > 1:1683898/1‑93 (MQ=255)
aTCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATg > 1:4230688/1‑93 (MQ=255)
cATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAg < 1:5488209/93‑1 (MQ=255)
cATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAg < 2:2276081/93‑1 (MQ=255)
aTGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAgg < 1:5579557/93‑1 (MQ=255)
tGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGa < 2:3700406/93‑1 (MQ=255)
tGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGa > 2:1195492/1‑93 (MQ=255)
gATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGAc < 1:1011203/93‑1 (MQ=255)
gATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGAc > 1:2007447/1‑93 (MQ=255)
aTTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACa < 2:4480910/93‑1 (MQ=255)
aTTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACa > 2:5432777/1‑93 (MQ=255)
aTTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACa < 2:2619606/93‑1 (MQ=255)
tGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATc < 1:4757788/93‑1 (MQ=255)
gTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCg > 2:3908049/1‑93 (MQ=255)
ttttACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCgg < 2:3748366/93‑1 (MQ=255)
tttACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGt < 2:2883406/93‑1 (MQ=255)
ttACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTg < 2:3308674/93‑1 (MQ=255)
ttACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTg < 2:5635239/93‑1 (MQ=255)
tACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGa > 2:3205158/1‑93 (MQ=255)
aCTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGGCATCGGTGAg > 2:1740390/1‑93 (MQ=255)
tATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGta > 2:5367669/1‑93 (MQ=255)
aTTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGtat > 1:881518/1‑93 (MQ=255)
ttttCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGtatt < 2:4858931/93‑1 (MQ=255)
ttttCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGtatt > 1:1975740/1‑93 (MQ=255)
tttCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGtatta < 1:1079513/93‑1 (MQ=255)
tttCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGtatta < 2:3652356/93‑1 (MQ=255)
ttCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGtattat < 2:3415790/93‑1 (MQ=255)
tCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTattatt < 2:5989187/93‑1 (MQ=255)
tCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTattatt < 2:5033175/93‑1 (MQ=255)
cGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTg < 1:6304348/93‑1 (MQ=255)
cGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTg < 1:3542385/93‑1 (MQ=255)
gCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTgg > 2:4703947/1‑93 (MQ=255)
cTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGc < 2:1115434/93‑1 (MQ=255)
tAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCa > 1:5401123/1‑93 (MQ=255)
gggTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAAc < 2:830601/93‑1 (MQ=255)
gggTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAAc > 2:5408008/1‑93 (MQ=255)
ggTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACa < 1:5373631/93‑1 (MQ=255)
ggTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACa < 1:4032086/93‑1 (MQ=255)
ggTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACa > 2:1400934/1‑93 (MQ=255)
ggTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACa > 1:1196551/1‑93 (MQ=255)
ggTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGATGAGTATTATTGGCAAACa < 2:6148074/93‑1 (MQ=255)
tACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGa > 1:1129201/1‑93 (MQ=255)
cTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAAc < 2:4598919/93‑1 (MQ=255)
tATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACt < 1:140370/93‑1 (MQ=255)
tATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACt < 2:4204172/93‑1 (MQ=255)
aTTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTg > 2:1828088/1‑93 (MQ=255)
aTTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTg < 2:6256577/93‑1 (MQ=255)
ttttttCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTgg < 1:4062154/93‑1 (MQ=255)
ttttCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGt < 1:5638647/93‑1 (MQ=255)
tttCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTa > 1:1520284/1‑93 (MQ=255)
tCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACa < 2:1616095/93‑1 (MQ=255)
ccGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACAt < 1:3104802/93‑1 (MQ=255)
cgcgTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATg < 2:2780727/93‑1 (MQ=255)
gcgTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGt > 1:3664868/1‑93 (MQ=255)
gTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTaa > 1:3968701/1‑93 (MQ=255)
gTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTaa > 1:3355325/1‑93 (MQ=255)
gTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTaa > 1:2543666/1‑93 (MQ=255)
tttCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTaaa > 2:3038357/1‑93 (MQ=255)
ctttCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAaata < 1:4278799/90‑1 (MQ=255)
tGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAaataa > 2:1327540/1‑93 (MQ=255)
gTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAaataat < 1:220480/93‑1 (MQ=255)
tCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAataata < 2:3510476/93‑1 (MQ=255)
tCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAataata < 1:5300578/93‑1 (MQ=255)
tCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAataata < 2:4421793/93‑1 (MQ=255)
cTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAAtaataa > 1:3082825/1‑93 (MQ=255)
ttAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATaaa > 2:2843859/1‑93 (MQ=255)
tAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAAt < 1:4657183/93‑1 (MQ=255)
aaaTAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAAtt > 2:856192/1‑93 (MQ=255)
aataatAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTc > 1:6255435/1‑93 (MQ=255)
aataatAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTc > 1:99924/1‑93 (MQ=255)
ataataAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTca > 1:202714/1‑93 (MQ=255)
ataataAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTca > 2:2181346/1‑93 (MQ=255)
taataaAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTcac < 2:1513856/93‑1 (MQ=255)
taataaAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTcac < 2:191132/93‑1 (MQ=255)
aataaAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTcaca < 1:2713779/93‑1 (MQ=255)
aataaAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTcaca > 1:5056563/1‑93 (MQ=255)
aataaAGCCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTcaca > 1:2422685/1‑93 (MQ=255)
ataaAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCacac < 1:3466512/93‑1 (MQ=255)
taaAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACAcc < 1:2553955/93‑1 (MQ=255)
aaaGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCa > 1:2782187/1‑93 (MQ=255)
aaaGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCa > 1:6048021/1‑93 (MQ=255)
aaGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCaa > 2:4765718/1‑93 (MQ=255)
aaGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCaa < 2:4384021/93‑1 (MQ=255)
aaGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCaa < 1:4438105/93‑1 (MQ=255)
|
ATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGCCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAA > NC_000913/734931‑735110
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGCCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCGG > NC_000913/734928‑735114
|
CTGATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGT > SRR4302533.5393008/1‑94 (MQ=60)
CTGATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGAACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGT > SRR4302533.3616452/1‑94 (MQ=60)
TGATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTC > SRR4302533.5775353/1‑94 (MQ=60)
ATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAT > SRR4302533.2296308/1‑94 (MQ=60)
ATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAT > SRR4302533.2034722/1‑94 (MQ=60)
TGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGT < SRR4302533.3244679/94‑1 (MQ=60)
TGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGT < SRR4302533.5033600/94‑1 (MQ=60)
GCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTG < SRR4302533.2049237/94‑1 (MQ=60)
GCGAAATACAAGCTAAAGATCATGATTGCTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTG < SRR4302533.676112/94‑1 (MQ=60)
CGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCGTGTCTTAAATAATAAAGTCATGTGG > SRR4302533.4410489/1‑94 (MQ=60)
GAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGA > SRR4302533.955300/1‑94 (MQ=60)
GAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGA < SRR4302533.4550716/94‑1 (MQ=60)
GAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGA > SRR4302533.514021/1‑94 (MQ=60)
AATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGA < SRR4302533.344461/94‑1 (MQ=60)
ATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGAT < SRR4302533.2443056/94‑1 (MQ=60)
CAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGT > SRR4302533.4981313/1‑94 (MQ=60)
AGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTAT > SRR4302533.1490298/1‑94 (MQ=60)
GCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATC < SRR4302533.4691393/94‑1 (MQ=60)
CTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCA > SRR4302533.4085937/1‑94 (MQ=60)
TAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCGGTCTTAAATAATAAAGCAATGTGGAGATGGTATaaa > SRR4302533.256565/1‑91 (MQ=60)
AAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGA > SRR4302533.1268060/1‑94 (MQ=60)
AAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAA > SRR4302533.2987494/1‑94 (MQ=60)
AGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAAT < SRR4302533.4941898/94‑1 (MQ=60)
GATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATG > SRR4302533.4256261/1‑94 (MQ=60)
GATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATG > SRR4302533.1694099/1‑94 (MQ=60)
ATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGA > SRR4302533.4714634/1‑94 (MQ=60)
TCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAG < SRR4302533.1807038/94‑1 (MQ=60)
CATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGG < SRR4302533.5521296/94‑1 (MQ=60)
ATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGA > SRR4302533.1997707/1‑94 (MQ=60)
ATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGA < SRR4302533.5613277/94‑1 (MQ=60)
TGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGAC > SRR4302533.2019811/1‑94 (MQ=60)
TGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGAC > SRR4302533.3537128/1‑94 (MQ=60)
TGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGAC < SRR4302533.1123847/94‑1 (MQ=60)
GATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACA < SRR4302533.1017120/94‑1 (MQ=60)
TTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATC < SRR4302533.5056813/94‑1 (MQ=60)
TGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCG < SRR4302533.4786654/94‑1 (MQ=60)
TGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTCCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCG < SRR4302533.5724240/94‑1 (MQ=60)
GTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGG > SRR4302533.1690102/1‑94 (MQ=60)
GTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGG > SRR4302533.4102728/1‑94 (MQ=60)
TTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGT > SRR4302533.690317/1‑94 (MQ=60)
TATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTAT > SRR4302533.886697/1‑94 (MQ=60)
ATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATT > SRR4302533.1987842/1‑94 (MQ=60)
TTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTAT < SRR4302533.4363560/94‑1 (MQ=60)
TTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTAT < SRR4302533.1085875/94‑1 (MQ=60)
CGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGG < SRR4302533.6342045/94‑1 (MQ=60)
CGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGG > SRR4302533.1220949/1‑94 (MQ=60)
CGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGG < SRR4302533.3564217/94‑1 (MQ=60)
GCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGCAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGC > SRR4302533.2786166/1‑94 (MQ=60)
CTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCA > SRR4302533.5460659/1‑94 (MQ=60)
CTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCA > SRR4302533.5433580/1‑94 (MQ=60)
GGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACA > SRR4302533.1203740/1‑94 (MQ=60)
GGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACA > SRR4302533.2743692/1‑94 (MQ=60)
GGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAG < SRR4302533.4056632/94‑1 (MQ=60)
GGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAG < SRR4302533.4447049/94‑1 (MQ=60)
GGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAG < SRR4302533.5405921/94‑1 (MQ=60)
GTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGA > SRR4302533.1135911/1‑94 (MQ=60)
TACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAA > SRR4302533.1479010/1‑94 (MQ=60)
TACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAA > SRR4302533.6293575/1‑94 (MQ=60)
TCTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAAC < SRR4302533.3694123/94‑1 (MQ=60)
ACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAAC > SRR4302533.354719/1‑94 (MQ=60)
CTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACT < SRR4302533.656877/94‑1 (MQ=60)
CTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACT > SRR4302533.915349/1‑94 (MQ=60)
TATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTG < SRR4302533.141264/94‑1 (MQ=60)
TATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTG > SRR4302533.4654138/1‑94 (MQ=60)
ATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGG > SRR4302533.4196521/1‑94 (MQ=60)
TTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGG < SRR4302533.4086883/94‑1 (MQ=60)
TTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGG > SRR4302533.103511/1‑94 (MQ=60)
TTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTA > SRR4302533.1529437/1‑94 (MQ=60)
TTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTA < SRR4302533.5672737/94‑1 (MQ=60)
TTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACA > SRR4302533.1413503/1‑94 (MQ=60)
CCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATG < SRR4302533.3123888/94‑1 (MQ=60)
CCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATG < SRR4302533.4880800/94‑1 (MQ=60)
CGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGT < SRR4302533.3107295/94‑1 (MQ=60)
CGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGT > SRR4302533.3687396/1‑94 (MQ=60)
CGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGT < SRR4302533.2184382/94‑1 (MQ=60)
CGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAA > SRR4302533.2559318/1‑94 (MQ=60)
CGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAA > SRR4302533.3992874/1‑94 (MQ=60)
CGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAA > SRR4302533.3376059/1‑94 (MQ=60)
TTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAA > SRR4302533.5375447/1‑94 (MQ=60)
TTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAA < SRR4302533.5149369/94‑1 (MQ=60)
TTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAA > SRR4302533.1157540/1‑94 (MQ=60)
TCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAAT < SRR4302533.614751/94‑1 (MQ=60)
TCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAAT < SRR4302533.5100341/94‑1 (MQ=60)
CTTTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAA < SRR4302533.4304530/94‑1 (MQ=60)
CTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAA > SRR4302533.426810/1‑94 (MQ=60)
GTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATA < SRR4302533.221861/94‑1 (MQ=60)
GTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATA > SRR4302533.5590972/1‑94 (MQ=60)
GTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATA > SRR4302533.565112/1‑94 (MQ=60)
GTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTCGGTACATGTAAAAATAATA > SRR4302533.5856423/1‑94 (MQ=60)
TCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAA < SRR4302533.5332332/94‑1 (MQ=60)
TCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAA > SRR4302533.3101777/1‑94 (MQ=60)
GCTTAAATAATAAAGTCATGTGGAGATTGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAA < SRR4302533.4476585/94‑1 (MQ=60)
TTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAAT < SRR4302533.5145276/94‑1 (MQ=60)
TTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAAT < SRR4302533.4028553/94‑1 (MQ=60)
TAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATT < SRR4302533.3635248/94‑1 (MQ=60)
TAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATT < SRR4302533.4685404/94‑1 (MQ=60)
AAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTC > SRR4302533.6292843/1‑94 (MQ=60)
AAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTC > SRR4302533.3087365/1‑94 (MQ=60)
AAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTC > SRR4302533.100544/1‑94 (MQ=60)
AATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCA > SRR4302533.204001/1‑94 (MQ=60)
ATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCAC < SRR4302533.983723/94‑1 (MQ=60)
TAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACA > SRR4302533.5087127/1‑94 (MQ=60)
TAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACA < SRR4302533.1278545/94‑1 (MQ=60)
TAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACA > SRR4302533.2963941/1‑94 (MQ=60)
TAATAAAGCCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACA > SRR4302533.2437640/1‑94 (MQ=60)
AATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACAC < SRR4302533.2730445/94‑1 (MQ=60)
AATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACAC < SRR4302533.90297/94‑1 (MQ=60)
ATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACC < SRR4302533.5421590/94‑1 (MQ=60)
ATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACC < SRR4302533.3487907/94‑1 (MQ=60)
TAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCA > SRR4302533.6084667/1‑94 (MQ=60)
TAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCA > SRR4302533.2799280/1‑94 (MQ=60)
TAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCA < SRR4302533.1523277/94‑1 (MQ=60)
TAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCA < SRR4302533.2569668/94‑1 (MQ=60)
AAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAG < SRR4302533.2679792/94‑1 (MQ=60)
AAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAG < SRR4302533.4464934/94‑1 (MQ=60)
AGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGC < SRR4302533.6159111/94‑1 (MQ=60)
GTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCG < SRR4302533.4900975/94‑1 (MQ=60)
TCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAACCAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCGG < SRR4302533.4475528/94‑1 (MQ=60)
TCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCGG < SRR4302533.5708952/94‑1 (MQ=60)
|
CTGATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGCCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCGG > NC_000913/734928‑735114
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
