Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 735,021 C→T A50V (GCC→GTC)  ybfC → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913735,0210CT99.8% 1907.1 / ‑5.8 528A50V (GCC→GTC) ybfChypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base T (255/271);  total (257/271)
Fisher's exact test for biased strand distribution p-value = 4.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01

Only 100 of 535 total aligned reads displayed.

ATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGCCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAA  >  NC_000913/734931‑735110
                                                                                          |                                                                                         
aTTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCa                                                                                         >  1:1447415/1‑93 (MQ=255)
aTTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCa                                                                                         <  2:9158700/93‑1 (MQ=255)
 ttGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAt                                                                                        <  2:5824583/93‑1 (MQ=255)
 ttGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAt                                                                                        >  2:2858795/1‑93 (MQ=255)
 ttGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAt                                                                                        <  2:7630534/93‑1 (MQ=255)
 ttGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAt                                                                                        >  2:4786536/1‑93 (MQ=255)
  tGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAtg                                                                                       <  2:9088466/93‑1 (MQ=255)
      aaaTACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGga                                                                                   >  1:2533755/1‑93 (MQ=255)
      aaaTACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGga                                                                                   <  2:2600633/93‑1 (MQ=255)
        aTACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGgaga                                                                                 >  1:3782955/1‑93 (MQ=255)
        aTACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGgaga                                                                                 >  1:7196655/1‑93 (MQ=255)
         tACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGAt                                                                                >  2:3046945/1‑93 (MQ=255)
           cAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATgg                                                                              >  2:1267206/1‑93 (MQ=255)
           cAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATgg                                                                              >  1:2714279/1‑93 (MQ=255)
           cAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATgg                                                                              <  2:10041522/93‑1 (MQ=255)
              gCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTATTAAATAATAAAGTCATGTGGAGATGGTAt                                                                           <  1:4470392/93‑1 (MQ=255)
               cTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATc                                                                          >  2:7830923/1‑93 (MQ=255)
                tAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCa                                                                         >  2:4688806/1‑93 (MQ=255)
                tAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCa                                                                         >  2:6311130/1‑93 (MQ=255)
                  aaGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGa                                                                       <  1:1568845/93‑1 (MQ=255)
                   aGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGaa                                                                      <  1:174585/93‑1 (MQ=255)
                    gATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAAt                                                                     <  2:3509266/93‑1 (MQ=255)
                      tCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGa                                                                   <  2:2679485/93‑1 (MQ=255)
                        aTGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAgg                                                                 >  1:9601607/1‑93 (MQ=255)
                        aTGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAgg                                                                 >  1:6924483/1‑93 (MQ=255)
                         tGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGa                                                                <  1:4110497/93‑1 (MQ=255)
                         tGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGa                                                                <  2:4074032/93‑1 (MQ=255)
                         tGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGa                                                                >  1:577029/1‑93 (MQ=255)
                          gATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGAc                                                               >  1:8589059/1‑93 (MQ=255)
                           aTTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACa                                                              <  1:8411157/93‑1 (MQ=255)
                            ttGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACAt                                                             >  2:3443630/1‑93 (MQ=255)
                            ttGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACAt                                                             >  2:3957203/1‑93 (MQ=255)
                              gTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGGGGAGATGGGATCAGAATGAGAACATCg                                                           >  1:7772463/1‑93 (MQ=255)
                               ttttACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCgg                                                          >  2:2345701/1‑93 (MQ=255)
                               ttttACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCgg                                                          >  2:8320083/1‑93 (MQ=255)
                               ttttACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCgg                                                          >  1:4839414/1‑93 (MQ=255)
                               ttttACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTGCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCgg                                                          <  2:9436593/93‑1 (MQ=255)
                                tttACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGt                                                         >  2:8770260/1‑93 (MQ=255)
                                tttACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGt                                                         <  2:430157/93‑1 (MQ=255)
                                  tACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGATATCGGTGa                                                       <  2:7984005/93‑1 (MQ=255)
                                  tACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGa                                                       <  1:8794337/93‑1 (MQ=255)
                                  tACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGGATCAGAATGAGGACATCGGTGa                                                       >  2:6761428/1‑93 (MQ=255)
                                   aCTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAg                                                      >  1:7249573/1‑93 (MQ=255)
                                      aTTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGtat                                                   <  1:4247235/93‑1 (MQ=255)
                                       ttttCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGtatt                                                  <  2:64171/93‑1 (MQ=255)
                                        tttCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGtatta                                                 <  1:333286/93‑1 (MQ=255)
                                         ttCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGtattat                                                <  1:5266573/93‑1 (MQ=255)
                                          tCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTattatt                                               <  1:792208/93‑1 (MQ=255)
                                          tCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTattatt                                               >  2:3851418/1‑93 (MQ=255)
                                           cGCTAAGTGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTg                                              <  2:6963981/93‑1 (MQ=255)
                                             cTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGc                                            >  1:9261149/1‑93 (MQ=255)
                                               aaGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCaa                                          >  1:5917423/1‑93 (MQ=255)
                                                aGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCaaa                                         <  1:9754912/93‑1 (MQ=255)
                                                aGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCaaa                                         >  2:8952708/1‑93 (MQ=255)
                                                  ggTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACa                                       <  2:1483897/93‑1 (MQ=255)
                                                  ggTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACa                                       <  2:4886110/93‑1 (MQ=255)
                                                  ggTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACa                                       >  1:4994050/1‑93 (MQ=255)
                                                    tACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGa                                     >  2:6060677/1‑93 (MQ=255)
                                                     aCTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGaa                                    <  2:2086739/93‑1 (MQ=255)
                                                     aCTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGaa                                    <  1:10004523/93‑1 (MQ=255)
                                                     aCTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGaa                                    <  1:13404/93‑1 (MQ=255)
                                                      cTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAAc                                   <  1:2991702/93‑1 (MQ=255)
                                                       tATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACt                                  >  2:6168/1‑93 (MQ=255)
                                                         ttttttCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTgg                                >  1:8896986/1‑93 (MQ=255)
                                                          tttttCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTggg                               >  1:6600375/1‑93 (MQ=255)
                                                            tttCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTa                             <  2:1825130/93‑1 (MQ=255)
                                                            tttCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTa                             <  1:682435/93‑1 (MQ=255)
                                                             ttCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTAc                            <  1:7526437/93‑1 (MQ=255)
                                                              tCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACa                           <  1:4766088/93‑1 (MQ=255)
                                                              tCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACa                           >  1:6176565/1‑93 (MQ=255)
                                                               ccGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACAt                          <  2:9809991/93‑1 (MQ=255)
                                                               ccGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACAt                          >  1:5599730/1‑93 (MQ=255)
                                                               ccGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACAt                          <  2:5964799/93‑1 (MQ=255)
                                                                cgcgTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATg                         >  1:1153803/1‑93 (MQ=255)
                                                                cgcgTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATg                         <  1:210676/93‑1 (MQ=255)
                                                                 gcgTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGt                        <  2:5006964/93‑1 (MQ=255)
                                                                 gcgTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGt                        <  2:1343537/93‑1 (MQ=255)
                                                                 gcgTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGt                        >  1:9331897/1‑93 (MQ=255)
                                                                  cgTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTa                       <  2:8617600/93‑1 (MQ=255)
                                                                  cgTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTa                       <  2:7746607/93‑1 (MQ=255)
                                                                      tCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTaaaaa                   >  2:5610027/1‑93 (MQ=255)
                                                                      tCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTaaaaa                   >  1:9209960/1‑93 (MQ=255)
                                                                       ccTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAaat                  <  1:2862504/93‑1 (MQ=255)
                                                                        cTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAaata                 >  2:5354194/1‑93 (MQ=255)
                                                                        cTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAaata                 >  2:806726/1‑93 (MQ=255)
                                                                         tGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAaataa                <  1:3170901/93‑1 (MQ=255)
                                                                          gTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAaataat               >  1:3963986/1‑93 (MQ=255)
                                                                           tCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAataata              <  1:8268146/93‑1 (MQ=255)
                                                                           tCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAataata              >  1:4510064/1‑93 (MQ=255)
                                                                             ttAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATaaa            >  2:6652054/1‑93 (MQ=255)
                                                                             ttAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATaaa            >  2:1732691/1‑93 (MQ=255)
                                                                             ttAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATaaa            <  2:9616902/93‑1 (MQ=255)
                                                                                aataatAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTc         <  2:3252115/93‑1 (MQ=255)
                                                                                aataatAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTc         <  1:2401778/93‑1 (MQ=255)
                                                                                   aataaAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTcaca      >  2:7367246/1‑93 (MQ=255)
                                                                                    ataaAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCacac     <  1:5434855/93‑1 (MQ=255)
                                                                                    ataaAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCacac     >  2:4445980/1‑93 (MQ=255)
                                                                                     taaAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACAcc    <  2:7535726/93‑1 (MQ=255)
                                                                                       aaGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCaa  <  1:8013312/93‑1 (MQ=255)
                                                                                       aaGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCaa  <  2:841810/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGCCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAA  >  NC_000913/734931‑735110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 267 total aligned reads displayed.
TGATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGCCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCGG  >  NC_000913/734929‑735114
                                                                                            |                                                                                             
TGATTGCGAAATACAAGCTAAACATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTC                                                                                              <  SRR4302540.7936118/94‑1 (MQ=60)
 GATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCA                                                                                             <  SRR4302540.4028139/94‑1 (MQ=60)
 GATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCA                                                                                             <  SRR4302540.2261422/94‑1 (MQ=60)
 GATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCA                                                                                             >  SRR4302540.8521558/1‑94 (MQ=60)
 GATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCA                                                                                             >  SRR4302540.1463152/1‑94 (MQ=60)
 GATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCA                                                                                             >  SRR4302540.1463151/1‑94 (MQ=60)
  ATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAT                                                                                            <  SRR4302540.3091208/94‑1 (MQ=60)
  ATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAT                                                                                            >  SRR4302540.1770536/1‑94 (MQ=60)
  ATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAT                                                                                            <  SRR4302540.2703332/94‑1 (MQ=60)
  ATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCAT                                                                                            <  SRR4302540.5536121/94‑1 (MQ=60)
    TGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGT                                                                                          <  SRR4302540.6805489/94‑1 (MQ=60)
    TGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGT                                                                                          <  SRR4302540.151499/94‑1 (MQ=60)
      CGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGG                                                                                        >  SRR4302540.7409057/1‑94 (MQ=60)
       GAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGA                                                                                       >  SRR4302540.4642088/1‑94 (MQ=60)
       GAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGA                                                                                       >  SRR4302540.2561084/1‑94 (MQ=60)
         AATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTCAATACTAAAGTCATGTGGAGA                                                                                     >  SRR4302540.5039936/1‑94 (MQ=60)
         AATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGT                                                                                     >  SRR4302540.8014302/1‑94 (MQ=60)
         AATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGA                                                                                     <  SRR4302540.7878318/94‑1 (MQ=60)
         AATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGA                                                                                     >  SRR4302540.4534816/1‑94 (MQ=60)
         AATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGA                                                                                     >  SRR4302540.3824213/1‑94 (MQ=60)
          ATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGAT                                                                                    <  SRR4302540.9410954/94‑1 (MQ=60)
          ATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGAT                                                                                    <  SRR4302540.5968950/94‑1 (MQ=60)
          ATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGAT                                                                                    <  SRR4302540.5216237/94‑1 (MQ=60)
            ACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGG                                                                                  >  SRR4302540.2552079/1‑94 (MQ=60)
            ACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGG                                                                                  <  SRR4302540.6993774/94‑1 (MQ=60)
             CAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGT                                                                                 <  SRR4302540.2172937/94‑1 (MQ=60)
               AGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTAT                                                                               <  SRR4302540.7232119/94‑1 (MQ=60)
               AGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTAT                                                                               <  SRR4302540.1388090/94‑1 (MQ=60)
                GCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTATTAAATAATAAAGTCATGTGGAGATGGTATC                                                                              <  SRR4302540.4518869/94‑1 (MQ=60)
                 CTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCA                                                                             <  SRR4302540.3101955/94‑1 (MQ=60)
                 CTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCA                                                                             <  SRR4302540.6343913/94‑1 (MQ=60)
                 CTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCA                                                                             >  SRR4302540.156641/1‑94 (MQ=60)
                  TAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAG                                                                            <  SRR4302540.3923129/94‑1 (MQ=60)
                   AAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGA                                                                           >  SRR4302540.7313273/1‑94 (MQ=60)
                   AAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGA                                                                           >  SRR4302540.4791930/1‑94 (MQ=60)
                    AAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAA                                                                          <  SRR4302540.2625224/94‑1 (MQ=60)
                    AAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAA                                                                          <  SRR4302540.1586047/94‑1 (MQ=60)
                     AGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAAT                                                                         <  SRR4302540.1063428/94‑1 (MQ=60)
                     AGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAAT                                                                         >  SRR4302540.1107666/1‑94 (MQ=60)
                     AGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAAT                                                                         <  SRR4302540.762845/94‑1 (MQ=60)
                     AGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAAT                                                                         <  SRR4302540.9686721/94‑1 (MQ=60)
                     AGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAAT                                                                         <  SRR4302540.149225/94‑1 (MQ=60)
                     AGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAAT                                                                         <  SRR4302540.8719704/94‑1 (MQ=60)
                      GATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATG                                                                        >  SRR4302540.1715375/1‑94 (MQ=60)
                      GATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTGTCCTGTCTTAAATAATAAAGGCATGTGGGGATGGTATCAGAATG                                                                        >  SRR4302540.6448469/1‑94 (MQ=60)
                       ATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGA                                                                       >  SRR4302540.5200197/1‑94 (MQ=60)
                        TCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCCGGATGAG                                                                      >  SRR4302540.1807997/1‑94 (MQ=60)
                        TCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAG                                                                      <  SRR4302540.7038848/94‑1 (MQ=60)
                         CATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGG                                                                     >  SRR4302540.9714870/1‑94 (MQ=60)
                         CATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGG                                                                     >  SRR4302540.7001542/1‑94 (MQ=60)
                          ATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGA                                                                    <  SRR4302540.4013338/94‑1 (MQ=60)
                          ATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGA                                                                    >  SRR4302540.7179206/1‑94 (MQ=60)
                          ATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGA                                                                    <  SRR4302540.2381537/94‑1 (MQ=60)
                          ATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGA                                                                    >  SRR4302540.583280/1‑94 (MQ=60)
                          ATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGA                                                                    <  SRR4302540.6302607/94‑1 (MQ=60)
                          ATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGA                                                                    <  SRR4302540.9375156/94‑1 (MQ=60)
                           TGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGAC                                                                   >  SRR4302540.8688906/1‑94 (MQ=60)
                           TGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGAC                                                                   <  SRR4302540.4154869/94‑1 (MQ=60)
                            GATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACA                                                                  <  SRR4302540.8134699/94‑1 (MQ=60)
                             ATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACAT                                                                 <  SRR4302540.8508782/94‑1 (MQ=60)
                             ATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACAT                                                                 <  SRR4302540.8878882/94‑1 (MQ=60)
                             ATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACAT                                                                 <  SRR4302540.1993592/94‑1 (MQ=60)
                             ATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACAT                                                                 >  SRR4302540.6048780/1‑94 (MQ=60)
                              TTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATC                                                                >  SRR4302540.7286002/1‑94 (MQ=60)
                               TGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCG                                                               >  SRR4302540.7863324/1‑94 (MQ=60)
                               TGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCG                                                               <  SRR4302540.8791892/94‑1 (MQ=60)
                                GTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGG                                                              >  SRR4302540.4891253/1‑94 (MQ=60)
                                GTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGG                                                              >  SRR4302540.4836064/1‑94 (MQ=60)
                                GTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGG                                                              <  SRR4302540.9469108/94‑1 (MQ=60)
                                GTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGG                                                              >  SRR4302540.9807745/1‑94 (MQ=60)
                                 TTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGT                                                             <  SRR4302540.5538250/94‑1 (MQ=60)
                                  TTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTG                                                            >  SRR4302540.491583/1‑94 (MQ=60)
                                  TTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTG                                                            >  SRR4302540.3026451/1‑94 (MQ=60)
                                  TTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTG                                                            <  SRR4302540.8964580/94‑1 (MQ=60)
                                   TTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGA                                                           <  SRR4302540.4459426/94‑1 (MQ=60)
                                    TACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAG                                                          >  SRR4302540.7330467/1‑94 (MQ=60)
                                    TACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAG                                                          <  SRR4302540.8896048/94‑1 (MQ=60)
                                    TACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAG                                                          >  SRR4302540.7944454/1‑94 (MQ=60)
                                    TACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAG                                                          <  SRR4302540.1670786/94‑1 (MQ=60)
                                      CTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTA                                                        >  SRR4302540.1340559/1‑94 (MQ=60)
                                       TATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTAT                                                       <  SRR4302540.3743402/94‑1 (MQ=60)
                                       TATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTAT                                                       <  SRR4302540.3424473/94‑1 (MQ=60)
                                       TATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTAT                                                       <  SRR4302540.8439062/94‑1 (MQ=60)
                                        ATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATT                                                      >  SRR4302540.8376318/1‑94 (MQ=60)
                                        ATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCAGTGAGTATT                                                      >  SRR4302540.2770652/1‑94 (MQ=60)
                                         TTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTA                                                     <  SRR4302540.7209009/94‑1 (MQ=60)
                                          TTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTAT                                                    <  SRR4302540.7721757/94‑1 (MQ=60)
                                          TTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTAT                                                    <  SRR4302540.336639/94‑1 (MQ=60)
                                          TTTCGCTAAGGGTACTATTTTTTCCGCGTTTCATGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTAT                                                    <  SRR4302540.3332883/94‑1 (MQ=60)
                                           TTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATT                                                   <  SRR4302540.5324049/94‑1 (MQ=60)
                                           TTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATT                                                   <  SRR4302540.8085441/94‑1 (MQ=60)
                                            TCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTG                                                  <  SRR4302540.800618/94‑1 (MQ=60)
                                             CGCTAAGGGTACTA‑TTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGC                                                <  SRR4302540.3945923/94‑1 (MQ=60)
                                              GCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGC                                                >  SRR4302540.9371937/1‑94 (MQ=60)
                                               CTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATTGGCGAGTATTATTGGCA                                               >  SRR4302540.9054077/1‑94 (MQ=60)
                                               CTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCA                                               >  SRR4302540.6831705/1‑94 (MQ=60)
                                               CTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCA                                               >  SRR4302540.3334031/1‑94 (MQ=60)
                                               CTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCA                                               >  SRR4302540.4440251/1‑94 (MQ=60)
                                               CTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATCGTATCAGAATGACCACATCGGTGAGTATTATTGGCA                                               <  SRR4302540.1816112/94‑1 (MQ=60)
                                                TAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAA                                              <  SRR4302540.6961457/94‑1 (MQ=60)
                                                 AAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAA                                             >  SRR4302540.8529802/1‑94 (MQ=60)
                                                 AAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAA                                             >  SRR4302540.2462465/1‑94 (MQ=60)
                                                  AGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAAC                                            >  SRR4302540.9016060/1‑94 (MQ=60)
                                                   GGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACA                                           <  SRR4302540.2869694/94‑1 (MQ=60)
                                                   GGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACA                                           <  SRR4302540.7398863/94‑1 (MQ=60)
                                                   GGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACA                                           <  SRR4302540.8133812/94‑1 (MQ=60)
                                                   GGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACA                                           >  SRR4302540.5048113/1‑94 (MQ=60)
                                                    GGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAG                                          >  SRR4302540.9483550/1‑94 (MQ=60)
                                                    GGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAG                                          >  SRR4302540.9370621/1‑94 (MQ=60)
                                                     GTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGA                                         >  SRR4302540.4236465/1‑94 (MQ=60)
                                                     GTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGA                                         >  SRR4302540.4545037/1‑94 (MQ=60)
                                                      TACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAA                                        >  SRR4302540.6109707/1‑94 (MQ=60)
                                                      TACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAA                                        >  SRR4302540.9901848/1‑94 (MQ=60)
                                                      TACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAA                                        <  SRR4302540.2976287/94‑1 (MQ=60)
                                                       ACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGCAC                                       >  SRR4302540.9334517/1‑94 (MQ=60)
                                                       ACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAAC                                       <  SRR4302540.10121051/94‑1 (MQ=60)
                                                       ACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAAC                                       >  SRR4302540.1289472/1‑94 (MQ=60)
                                                       ACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAAC                                       <  SRR4302540.4128802/94‑1 (MQ=60)
                                                       ACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAAC                                       >  SRR4302540.1371056/1‑94 (MQ=60)
                                                       ACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAAC                                       <  SRR4302540.4121300/94‑1 (MQ=60)
                                                       ACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTAGCAAACAGAAC                                       >  SRR4302540.9834403/1‑94 (MQ=60)
                                                        CTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACT                                      >  SRR4302540.10152789/1‑94 (MQ=60)
                                                        CTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACT                                      <  SRR4302540.262172/94‑1 (MQ=60)
                                                        CTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACT                                      <  SRR4302540.3024683/94‑1 (MQ=60)
                                                        CTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACT                                      <  SRR4302540.6544145/94‑1 (MQ=60)
                                                        CTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACT                                      >  SRR4302540.5422990/1‑94 (MQ=60)
                                                        CTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACG                                      >  SRR4302540.5733649/1‑94 (MQ=60)
                                                          ATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGG                                    <  SRR4302540.8045487/94‑1 (MQ=60)
                                                          ATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGG                                    >  SRR4302540.8999974/1‑94 (MQ=60)
                                                          ATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGG                                    <  SRR4302540.5809290/94‑1 (MQ=60)
                                                           TTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGG                                   >  SRR4302540.932182/1‑94 (MQ=60)
                                                            TTTTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGT                                  <  SRR4302540.8592177/94‑1 (MQ=60)
                                                            TTTTTCAGCGTTTCCTGTCTAAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGT                                  <  SRR4302540.4834899/94‑1 (MQ=60)
                                                              TTTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTAC                                <  SRR4302540.689751/94‑1 (MQ=60)
                                                               TTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACA                               <  SRR4302540.7610657/94‑1 (MQ=60)
                                                               TTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACA                               >  SRR4302540.8059544/1‑94 (MQ=60)
                                                               TTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACA                               >  SRR4302540.6245379/1‑94 (MQ=60)
                                                               TTCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACA                               >  SRR4302540.6858995/1‑94 (MQ=60)
                                                                TCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACAT                              >  SRR4302540.5661337/1‑94 (MQ=60)
                                                                TCCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACAT                              <  SRR4302540.4816982/94‑1 (MQ=60)
                                                                 CCGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATG                             >  SRR4302540.1165813/1‑94 (MQ=60)
                                                                  CGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGT                            >  SRR4302540.5027545/1‑94 (MQ=60)
                                                                  CGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGT                            <  SRR4302540.212744/94‑1 (MQ=60)
                                                                  CGCGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGT                            >  SRR4302540.9443162/1‑94 (MQ=60)
                                                                    CGTTTCCTGTCTTAAATAATAAAGTCATGTGGCGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAA                          >  SRR4302540.3560688/1‑94 (MQ=60)
                                                                    CGTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAA                          <  SRR4302540.4302976/94‑1 (MQ=60)
                                                                     GTTTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAA                         >  SRR4302540.5357825/1‑94 (MQ=60)
                                                                       TTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAA                       >  SRR4302540.9320470/1‑94 (MQ=60)
                                                                       TTCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAA                       >  SRR4302540.4772216/1‑94 (MQ=60)
                                                                        TCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAAT                      >  SRR4302540.918818/1‑94 (MQ=60)
                                                                        TCCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAAT                      >  SRR4302540.10007869/1‑94 (MQ=60)
                                                                         CCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATA                     >  SRR4302540.9889986/1‑94 (MQ=60)
                                                                         CCTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATA                     <  SRR4302540.2893542/94‑1 (MQ=60)
                                                                          CTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAA                    >  SRR4302540.4167734/1‑94 (MQ=60)
                                                                          CTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAA                    >  SRR4302540.4167735/1‑94 (MQ=60)
                                                                          CTGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAA                    >  SRR4302540.7732008/1‑94 (MQ=60)
                                                                           TGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAAT                   >  SRR4302540.8948950/1‑94 (MQ=60)
                                                                           TGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAAT                   <  SRR4302540.2811310/94‑1 (MQ=60)
                                                                           TGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAAT                   <  SRR4302540.3205371/94‑1 (MQ=60)
                                                                           TGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAAT                   <  SRR4302540.5908170/94‑1 (MQ=60)
                                                                           TGTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAAT                   >  SRR4302540.4006729/1‑94 (MQ=60)
                                                                            GTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATA                  <  SRR4302540.9796630/94‑1 (MQ=60)
                                                                            GTCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATA                  >  SRR4302540.4558932/1‑94 (MQ=60)
                                                                             TCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAA                 <  SRR4302540.8344806/94‑1 (MQ=60)
                                                                             TCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAA                 <  SRR4302540.8364216/94‑1 (MQ=60)
                                                                             TCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAA                 <  SRR4302540.8364477/94‑1 (MQ=60)
                                                                             TCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAA                 <  SRR4302540.1692177/94‑1 (MQ=60)
                                                                             TCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAA                 >  SRR4302540.5640170/1‑94 (MQ=60)
                                                                             TCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAA                 <  SRR4302540.5323765/94‑1 (MQ=60)
                                                                             TCTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAA                 <  SRR4302540.5918406/94‑1 (MQ=60)
                                                                              CTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAA                <  SRR4302540.9413567/94‑1 (MQ=60)
                                                                              CTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAA                <  SRR4302540.2491841/94‑1 (MQ=60)
                                                                              CTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAA                <  SRR4302540.5157820/94‑1 (MQ=60)
                                                                              CTTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAA                >  SRR4302540.8981287/1‑94 (MQ=60)
                                                                               TTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAAT               <  SRR4302540.6038142/94‑1 (MQ=60)
                                                                               TTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAAT               <  SRR4302540.814828/94‑1 (MQ=60)
                                                                               TTAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAAT               <  SRR4302540.4868125/94‑1 (MQ=60)
                                                                                TAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATT              >  SRR4302540.3284512/1‑94 (MQ=60)
                                                                                TAAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATT              <  SRR4302540.3020821/94‑1 (MQ=60)
                                                                                 AAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTC             >  SRR4302540.7327734/1‑94 (MQ=60)
                                                                                 AAATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTC             <  SRR4302540.137537/94‑1 (MQ=60)
                                                                                  AATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCA            <  SRR4302540.2427677/94‑1 (MQ=60)
                                                                                   ATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGacgatgtaaaaccacaaaattcac           >  SRR4302540.5661608/1‑70 (MQ=60)
                                                                                   ATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCAC           <  SRR4302540.5481806/94‑1 (MQ=60)
                                                                                   ATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCAC           <  SRR4302540.2590162/94‑1 (MQ=60)
                                                                                   ATAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATAATTGGCAAACCGACCTGGGGACAGGTAAAAATAAAAAATTCca           >  SRR4302540.1210301/1‑92 (MQ=60)
                                                                                   ATAATAAAGTCATGTGGAGATGGGATCAGAATGAGGACATCGGTGAGTATTCTTGGCAAACAGAcgtgggaccctgaacaaatactcaattcac           >  SRR4302540.5661606/1‑64 (MQ=60)
                                                                                    TAATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACA          >  SRR4302540.4532543/1‑94 (MQ=60)
                                                                                     AATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACAC         <  SRR4302540.3980677/94‑1 (MQ=60)
                                                                                      ATAAAGTCATGTGGAGATGGTATCAGAATGAGTACATCGGTGAGTATTATTGGCAATCAGAACTGGGTACATGTAAAAATAATAAATTCTCACC        <  SRR4302540.7549351/94‑1 (MQ=60)
                                                                                      ATAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACA        >  SRR4302540.2988470/1‑94 (MQ=60)
                                                                                       TAAAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCA       <  SRR4302540.6956358/94‑1 (MQ=60)
                                                                                         AAGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAG     <  SRR4302540.4445342/94‑1 (MQ=60)
                                                                                          AGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGC    <  SRR4302540.2275632/94‑1 (MQ=60)
                                                                                          AGTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGC    >  SRR4302540.3032467/1‑94 (MQ=60)
                                                                                           GTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCG   >  SRR4302540.8008845/1‑94 (MQ=60)
                                                                                           GTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCG   >  SRR4302540.9659718/1‑94 (MQ=60)
                                                                                           GTCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCG   <  SRR4302540.5298179/94‑1 (MQ=60)
                                                                                            TCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCGG  <  SRR4302540.6379417/94‑1 (MQ=60)
                                                                                            TCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCGG  <  SRR4302540.9494644/94‑1 (MQ=60)
                                                                                            |                                                                                             
TGATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGCCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCGG  >  NC_000913/734929‑735114

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑