Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
756,320 |
T→C |
A397A (GCT→GCC) |
sdhA → |
succinate dehydrogenase flavoprotein subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 756,320 | 0 | T | C | 100.0%
| 694.9
/ NA
| 218 | A397A (GCT→GCC) | sdhA | succinate dehydrogenase flavoprotein subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (120/98); total (120/98) |
Only 100 of 225 total aligned reads displayed.
GGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCTAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGG > NC_000913/756230‑756409
|
ggCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCaa > 1:1196746/1‑93 (MQ=255)
ggCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCaa > 1:2828951/1‑93 (MQ=255)
cattgactgTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCACCAAcc < 2:206256/90‑1 (MQ=255)
actgactgTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCg > 1:3630175/1‑93 (MQ=255)
actgactgTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCg > 1:5367447/1‑93 (MQ=255)
gactgTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCt > 1:1492592/1‑93 (MQ=255)
gactgTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCt < 1:2524745/93‑1 (MQ=255)
actgTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTg > 1:4235997/1‑93 (MQ=255)
actgTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTg < 1:3709352/93‑1 (MQ=255)
actgTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTg < 1:1703075/93‑1 (MQ=255)
actgTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTg < 2:4859186/93‑1 (MQ=255)
actgTGAAGGAGAAAGGCGAAGATGTGGTGGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTg < 2:1559994/93‑1 (MQ=255)
ctgTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTgg < 1:1784248/93‑1 (MQ=255)
ctgTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTgg > 1:4785667/1‑93 (MQ=255)
tgtgAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTggg > 1:3562518/1‑93 (MQ=255)
tgtgAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTggg > 1:121036/1‑93 (MQ=255)
tgAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGggcg < 2:5061000/93‑1 (MQ=255)
tGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCaa < 2:723322/93‑1 (MQ=255)
gagaAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGGAATCGCTTGTGTATTGGTAAACGGCGCCAAACGTCTGTGCGGCagc > 2:4110983/1‑91 (MQ=255)
gagaAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAAc > 2:5423515/1‑93 (MQ=255)
gagaAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAAc < 1:5140684/93‑1 (MQ=255)
gaAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTc > 2:2913807/1‑93 (MQ=255)
gaAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTc > 2:442093/1‑93 (MQ=255)
aaGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGGAACTCgc > 2:4337530/1‑93 (MQ=255)
aaGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCgc > 1:5826966/1‑93 (MQ=255)
ggCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCgctg < 1:2814283/93‑1 (MQ=255)
cGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCgctgct > 2:4450632/1‑93 (MQ=255)
cGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCgctgct > 1:4922154/1‑93 (MQ=255)
gAAGGTGTGGTTGTTGCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCAGTACACGGCGCCACCCGCCTGGGCGGCAACTCGctgctg < 2:4221656/93‑1 (MQ=255)
gAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGctgctg > 2:5023757/1‑93 (MQ=255)
aaGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTgg > 2:3541826/1‑93 (MQ=255)
aaGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTgg > 1:6009398/1‑93 (MQ=255)
aaGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTgg > 1:3600992/1‑93 (MQ=255)
aGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGa < 1:4544345/93‑1 (MQ=255)
aGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGa > 2:4734430/1‑93 (MQ=255)
gATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGAc > 2:92304/1‑93 (MQ=255)
gATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTCGGCGGCCACTCGCTGCTGGAc > 1:2615806/1‑93 (MQ=255)
tgtgGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCt < 2:5873762/93‑1 (MQ=255)
ggTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCtggt < 2:3123794/93‑1 (MQ=255)
ttgttCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCtggtgg < 2:4556793/93‑1 (MQ=255)
ccGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCttt < 1:2493020/93‑1 (MQ=255)
cGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTg < 1:3368878/93‑1 (MQ=255)
cTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTcgc < 2:4162547/93‑1 (MQ=255)
tGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTcgcg > 1:3667952/1‑93 (MQ=255)
tGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTcgcg > 1:5089464/1‑93 (MQ=255)
tGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTcgcg < 2:4703806/93‑1 (MQ=255)
tttGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTcgcgcg > 1:1097068/1‑93 (MQ=255)
tttGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTcgcgcg > 2:2020837/1‑93 (MQ=255)
ttGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCgg < 2:797079/93‑1 (MQ=255)
ttGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCgg < 1:189830/93‑1 (MQ=255)
cGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAgg < 1:1055276/93‑1 (MQ=255)
cGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAgg > 2:2174212/1‑93 (MQ=255)
ttGGTGAAGTCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtc < 2:1807954/93‑1 (MQ=255)
ttGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtc < 1:923748/93‑1 (MQ=255)
ttGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtc < 2:571572/93‑1 (MQ=255)
ttGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtc > 1:6230604/1‑93 (MQ=255)
ttGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtc < 2:1307900/93‑1 (MQ=255)
tGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtct > 1:1296661/1‑93 (MQ=255)
ggTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctg > 2:1425319/1‑93 (MQ=255)
gTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgc < 2:6084846/93‑1 (MQ=255)
gTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgc < 2:1218012/93‑1 (MQ=255)
gTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgc > 2:3205229/1‑93 (MQ=255)
tGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgca > 1:4230825/1‑93 (MQ=255)
aaaTCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgcatc < 2:3164557/93‑1 (MQ=255)
aaaTCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgcatc < 1:4430970/93‑1 (MQ=255)
aaTCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgcatct > 2:2836225/1‑93 (MQ=255)
aaTCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgcatct > 1:2095538/1‑93 (MQ=255)
aaTCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgcatct < 2:3303248/93‑1 (MQ=255)
aaTCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgcatct > 2:4909309/1‑93 (MQ=255)
aaTCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgcatct > 1:3889521/1‑93 (MQ=255)
aTCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgcatctg > 1:3488245/1‑93 (MQ=255)
tCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGgctgcatctgc > 1:434106/1‑93 (MQ=255)
gCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGtctgcatctgcca > 2:2666949/1‑91 (MQ=255)
gCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCaa > 2:1037015/1‑93 (MQ=255)
gCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCaa > 1:2552043/1‑93 (MQ=255)
gCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCCGCATCTGCaa > 2:4040187/1‑93 (MQ=255)
cTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAag > 2:5106449/1‑93 (MQ=255)
ttGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAaga < 1:4067906/93‑1 (MQ=255)
tgtgTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGGATCTGCAagag > 1:5549398/1‑93 (MQ=255)
tgtATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTc < 1:3401080/93‑1 (MQ=255)
tgtATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTc < 1:2675532/93‑1 (MQ=255)
tgtATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTc < 2:2593602/93‑1 (MQ=255)
tgtATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTc < 2:3998916/93‑1 (MQ=255)
tATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTGGCGCGGCAGGTCTGCATCTGCAAGAGTCTa < 1:1600153/93‑1 (MQ=255)
tATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCTTCTGCAAGAGTCTa > 2:3685664/1‑93 (MQ=255)
ttCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTAt < 2:2546091/92‑1 (MQ=255)
tCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTAtt > 1:2954268/1‑92 (MQ=255)
tCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATc > 1:5938965/1‑93 (MQ=255)
tCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATc > 1:4459910/1‑93 (MQ=255)
ggTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGc < 2:384916/93‑1 (MQ=255)
gTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGcc > 2:5185208/1‑93 (MQ=255)
gTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCCGCAGGTCTGCATCTGCAAGAGTCTATCGcc < 2:6015564/93‑1 (MQ=255)
acacGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCgg > 1:1640036/1‑92 (MQ=255)
acGGCGCCAGCCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGc < 1:992382/93‑1 (MQ=255)
cGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCa > 2:5324870/1‑93 (MQ=255)
cGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCa > 2:5963814/1‑93 (MQ=255)
ggCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAg > 1:4940330/1‑93 (MQ=255)
gcgcCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAgg < 1:4887607/93‑1 (MQ=255)
gcgcCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAgg < 2:4646347/93‑1 (MQ=255)
cgcCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAggg < 1:650250/93‑1 (MQ=255)
|
GGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCTAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGG > NC_000913/756230‑756409
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCAGGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCTAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGCGCA > NC_000913/756227‑756413
|
TCAGGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCC < SRR4302533.3622110/94‑1 (MQ=60)
CAGGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCA > SRR4302533.1313073/1‑94 (MQ=60)
CAGGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCA < SRR4302533.809800/94‑1 (MQ=60)
AGGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAA > SRR4302533.2846357/1‑94 (MQ=60)
AGGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAA > SRR4302533.3594488/1‑94 (MQ=60)
AGGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAA > SRR4302533.1203936/1‑94 (MQ=60)
GGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAAC > SRR4302533.2509091/1‑94 (MQ=60)
GGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAAC > SRR4302533.1397488/1‑94 (MQ=60)
GGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAAC < SRR4302533.2485571/94‑1 (MQ=60)
GCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGGATCGGTACACGGCGCCAACC < SRR4302533.986733/94‑1 (MQ=60)
CACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCG > SRR4302533.5399693/1‑94 (MQ=60)
CACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCG > SRR4302533.6280087/1‑94 (MQ=60)
CACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCG > SRR4302533.3652510/1‑94 (MQ=60)
CACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGGTCCGGGACTGTTTGCCGTTGGGGAAATCGCTTGTGTATTGGTACACGGCGCCAACCG > SRR4302533.1194579/1‑94 (MQ=60)
ACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGT > SRR4302533.6310307/1‑94 (MQ=60)
TGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCT > SRR4302533.1501593/1‑94 (MQ=60)
TGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCT < SRR4302533.2691826/94‑1 (MQ=60)
GACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTG > SRR4302533.2948881/1‑94 (MQ=60)
GACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTG < SRR4302533.2540293/94‑1 (MQ=60)
GACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTG > SRR4302533.4261586/1‑94 (MQ=60)
ACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGG < SRR4302533.1713392/94‑1 (MQ=60)
ACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGG < SRR4302533.3732134/94‑1 (MQ=60)
ACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGG > SRR4302533.4814649/1‑94 (MQ=60)
CTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGG < SRR4302533.1795096/94‑1 (MQ=60)
CTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGG < SRR4302533.2832917/94‑1 (MQ=60)
CTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGG > SRR4302533.3584468/1‑94 (MQ=60)
CTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGG > SRR4302533.121801/1‑94 (MQ=60)
GAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGC < SRR4302533.2778414/94‑1 (MQ=60)
GAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACT < SRR4302533.5171754/94‑1 (MQ=60)
AGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTC > SRR4302533.444954/1‑94 (MQ=60)
AAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGC > SRR4302533.5862175/1‑94 (MQ=60)
AAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCT > SRR4302533.4317655/1‑94 (MQ=60)
AAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCT < SRR4302533.4909610/94‑1 (MQ=60)
AAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCT < SRR4302533.5020894/94‑1 (MQ=60)
AAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCT < SRR4302533.3419366/94‑1 (MQ=60)
AGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTG < SRR4302533.4027636/94‑1 (MQ=60)
AGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTG > SRR4302533.4673498/1‑94 (MQ=60)
GGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGC < SRR4302533.2831605/94‑1 (MQ=60)
GCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCT > SRR4302533.4951970/1‑94 (MQ=60)
GCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCT < SRR4302533.5156004/94‑1 (MQ=60)
GAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTCCACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGG < SRR4302533.1088198/94‑1 (MQ=60)
GAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGG > SRR4302533.1619988/1‑94 (MQ=60)
GAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGG > SRR4302533.3623150/1‑94 (MQ=60)
GAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGG > SRR4302533.6045805/1‑94 (MQ=60)
GAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGG > SRR4302533.1295665/1‑94 (MQ=60)
AGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGAC < SRR4302533.4571867/94‑1 (MQ=60)
AGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTCGGCGGCCACTCGCTGCTGGAC > SRR4302533.2631863/1‑94 (MQ=60)
GTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGG < SRR4302533.3552201/94‑1 (MQ=60)
TGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGT < SRR4302533.2577956/94‑1 (MQ=60)
GGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTG < SRR4302533.3630669/94‑1 (MQ=60)
GTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGG > SRR4302533.6004954/1‑94 (MQ=60)
CCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTG < SRR4302533.2508394/94‑1 (MQ=60)
CGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGG > SRR4302533.3710925/1‑94 (MQ=60)
CGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGG < SRR4302533.3389685/94‑1 (MQ=60)
GGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGT < SRR4302533.4548533/94‑1 (MQ=60)
GGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGT < SRR4302533.4961724/94‑1 (MQ=60)
GACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCG > SRR4302533.3069067/1‑94 (MQ=60)
CTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCG > SRR4302533.909784/1‑94 (MQ=60)
CTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCG > SRR4302533.3690496/1‑94 (MQ=60)
CTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCG > SRR4302533.3688326/1‑94 (MQ=60)
CTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCG > SRR4302533.5120214/1‑94 (MQ=60)
GTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCG > SRR4302533.1103565/1‑94 (MQ=60)
TTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGC < SRR4302533.191016/94‑1 (MQ=60)
GCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAG > SRR4302533.5282816/1‑94 (MQ=60)
GCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAG < SRR4302533.4759992/94‑1 (MQ=60)
CCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGG > SRR4302533.3771546/1‑94 (MQ=60)
CCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGG > SRR4302533.2635472/1‑94 (MQ=60)
CGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGT < SRR4302533.1061484/94‑1 (MQ=60)
CGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGT > SRR4302533.1709365/1‑94 (MQ=60)
GTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTC > SRR4302533.5949819/1‑94 (MQ=60)
GTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTC > SRR4302533.6267919/1‑94 (MQ=60)
TTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCT < SRR4302533.1587907/94‑1 (MQ=60)
TTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCT > SRR4302533.1304466/1‑94 (MQ=60)
TTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCT < SRR4302533.4260909/94‑1 (MQ=60)
TTGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCT < SRR4302533.929173/94‑1 (MQ=60)
TGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTG < SRR4302533.436240/94‑1 (MQ=60)
TGGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTG < SRR4302533.5858461/94‑1 (MQ=60)
GGTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGC > SRR4302533.1218243/1‑94 (MQ=60)
GTGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCA > SRR4302533.4256398/1‑94 (MQ=60)
TGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCAT > SRR4302533.1696861/1‑94 (MQ=60)
TGAAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCAT > SRR4302533.1725527/1‑94 (MQ=60)
AAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCT < SRR4302533.4457757/94‑1 (MQ=60)
AAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCT > SRR4302533.2108442/1‑94 (MQ=60)
AAATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCT > SRR4302533.3913253/1‑94 (MQ=60)
AATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTG > SRR4302533.3509758/1‑94 (MQ=60)
ATCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGGCTGCATCTGC > SRR4302533.436693/1‑94 (MQ=60)
TCGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCA < SRR4302533.1880345/94‑1 (MQ=60)
CGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAA > SRR4302533.3061165/1‑94 (MQ=60)
CGCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAA > SRR4302533.2567747/1‑94 (MQ=60)
GCTTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAG > SRR4302533.2149839/1‑94 (MQ=60)
TTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGGATCTGCAAGAG > SRR4302533.5582909/1‑94 (MQ=60)
TTGTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAG < SRR4302533.4092667/94‑1 (MQ=60)
GTGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTC < SRR4302533.6113411/94‑1 (MQ=60)
TGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCT < SRR4302533.3422081/94‑1 (MQ=60)
TGTATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCT < SRR4302533.2691942/94‑1 (MQ=60)
TATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTGGCGCGGCAGGTCTGCATCTGCAAGAGTCTAT < SRR4302533.1609839/94‑1 (MQ=60)
TATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTAT < SRR4302533.1212202/94‑1 (MQ=60)
ATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATT > SRR4302533.2972335/1‑94 (MQ=60)
ATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATC > SRR4302533.5974872/1‑94 (MQ=60)
ATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATC > SRR4302533.4486889/1‑94 (MQ=60)
ATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATC < SRR4302533.491727/94‑1 (MQ=60)
ATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATC > SRR4302533.3909518/1‑94 (MQ=60)
ATCGGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGAGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATC < SRR4302533.4461751/94‑1 (MQ=60)
GGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCC > SRR4302533.4212188/1‑94 (MQ=60)
GGTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGCGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCC > SRR4302533.5513867/1‑94 (MQ=60)
GTACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCG > SRR4302533.5059431/1‑94 (MQ=60)
TACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGG > SRR4302533.1649971/1‑94 (MQ=60)
ACACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAG < SRR4302533.1910787/94‑1 (MQ=60)
CACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGGATCTGCAAGAGTCTATCGCCGAGC > SRR4302533.569113/1‑94 (MQ=60)
ACGGCGCCAGCCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCA < SRR4302533.998184/94‑1 (MQ=60)
ACGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCA < SRR4302533.3607/94‑1 (MQ=60)
CGGCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAG > SRR4302533.4970238/1‑94 (MQ=60)
GGCGCCAACTGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTGTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGG < SRR4302533.5798301/94‑1 (MQ=60)
GCGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGG < SRR4302533.4917220/94‑1 (MQ=60)
CGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGC < SRR4302533.654088/94‑1 (MQ=60)
CGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGC < SRR4302533.3485950/94‑1 (MQ=60)
CGCCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGC < SRR4302533.2559387/94‑1 (MQ=60)
CCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGCGC > SRR4302533.5768993/1‑94 (MQ=60)
CCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGCGC > SRR4302533.4044006/1‑94 (MQ=60)
CCAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGCGC > SRR4302533.2812254/1‑94 (MQ=60)
CAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGCGCA > SRR4302533.3640764/1‑94 (MQ=60)
CAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGCGCA > SRR4302533.3504821/1‑94 (MQ=60)
CAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGCGCA > SRR4302533.2652212/1‑94 (MQ=60)
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TCAGGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCTAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGCGCA > NC_000913/756227‑756413
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
