Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
865,377 |
C→T |
G71R (GGG→AGG) |
moeA ← |
MoeA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 865,377 | 0 | C | T | 100.0%
| 777.7
/ NA
| 209 | G71R (GGG→AGG) | moeA | MoeA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (100/109); total (100/109) |
Only 100 of 217 total aligned reads displayed.
CGGTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCCGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCG > NC_000913/865287‑865466
|
cGGTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTgg > 1:2116307/1‑93 (MQ=255)
ggTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGa < 2:897726/93‑1 (MQ=255)
ggTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGa < 2:4521411/93‑1 (MQ=255)
ggTCATAATACGAACGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGa > 2:3851496/1‑93 (MQ=255)
tCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAgg > 1:3721557/1‑93 (MQ=255)
cATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGc < 1:4423372/93‑1 (MQ=255)
cATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGc > 2:5450801/1‑93 (MQ=255)
taataCGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGACGCaa > 1:3884108/1‑93 (MQ=255)
ataCGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAata > 2:1406453/1‑93 (MQ=255)
ataCGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAata > 1:2430039/1‑93 (MQ=255)
taCGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAatat < 1:3211433/93‑1 (MQ=255)
aCGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATc < 1:4512551/93‑1 (MQ=255)
aaTGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGc < 1:2027397/93‑1 (MQ=255)
tGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTa < 1:462504/93‑1 (MQ=255)
ggTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACg > 1:1593524/1‑93 (MQ=255)
gTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGc < 2:2988793/93‑1 (MQ=255)
tACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCa < 1:2302447/93‑1 (MQ=255)
aCCCGCAGGCCATTCACCATGGTATGGCTGACCGGCCAAGGATTTACCGGCCACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCAc > 1:597096/1‑93 (MQ=255)
cccGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCAcc > 1:1136022/1‑93 (MQ=255)
ccGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACcg < 1:5086452/93‑1 (MQ=255)
ccGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACcg < 2:1658763/93‑1 (MQ=255)
cGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCTGCTAAACGCACagc > 2:6027003/1‑93 (MQ=255)
cGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACcgc < 2:2562833/93‑1 (MQ=255)
aGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTa < 2:4282720/93‑1 (MQ=255)
aGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTa < 2:5980225/93‑1 (MQ=255)
aGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTa > 2:591884/1‑93 (MQ=255)
gCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGc < 2:4400578/93‑1 (MQ=255)
gCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGc < 2:5342618/93‑1 (MQ=255)
cATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCg > 2:5027006/1‑93 (MQ=255)
cATTCACCATGGTATGGCCGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCg > 1:2874647/1‑93 (MQ=255)
tCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTcc > 1:5710546/1‑93 (MQ=255)
tCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTcc < 1:3961182/93‑1 (MQ=255)
cACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCa < 1:5250350/93‑1 (MQ=255)
aCCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCAt > 1:2666902/1‑93 (MQ=255)
ccATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGTCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCAtt < 2:4706191/93‑1 (MQ=255)
ccATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCAtt > 1:1934456/1‑93 (MQ=255)
cATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTg > 1:5594924/1‑93 (MQ=255)
cATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTg < 2:4798770/93‑1 (MQ=255)
cATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTg > 1:2544590/1‑93 (MQ=255)
aTGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGc < 1:268196/93‑1 (MQ=255)
aTGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGc > 1:5754314/1‑93 (MQ=255)
aTGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGc < 1:6024897/93‑1 (MQ=255)
tGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCg > 1:850482/1‑93 (MQ=255)
ggTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCgg > 2:224498/1‑93 (MQ=255)
gTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCTTCCATTGCGGa > 2:3830156/1‑93 (MQ=255)
gTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGa < 1:295071/93‑1 (MQ=255)
tATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAg < 2:5799986/93‑1 (MQ=255)
tATGGCTGACCGACAAACGATATACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAg < 1:427347/93‑1 (MQ=255)
aTGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGt > 2:2961526/1‑93 (MQ=255)
aTGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGt > 2:2807728/1‑93 (MQ=255)
tGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGtt > 2:6051769/1‑93 (MQ=255)
ggCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTa < 2:5435668/93‑1 (MQ=255)
ggCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTa < 1:1120182/93‑1 (MQ=255)
ggCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTa < 1:608815/93‑1 (MQ=255)
cTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGGAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATc > 1:3083941/1‑93 (MQ=255)
gACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCaa < 1:366106/93‑1 (MQ=255)
gACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCaa < 1:1420365/93‑1 (MQ=255)
gACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCaa > 2:2904986/1‑93 (MQ=255)
aCCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCaaa < 2:1466822/93‑1 (MQ=255)
ccGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAAc < 1:4095684/93‑1 (MQ=255)
cGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAAcc < 2:4322598/93‑1 (MQ=255)
gCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAAcccc < 1:911881/93‑1 (MQ=255)
aaaGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCgg > 2:6274051/1‑93 (MQ=255)
aaaGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCgg > 2:5077785/1‑93 (MQ=255)
aaGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGa > 2:2091111/1‑93 (MQ=255)
ggATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAAc > 2:5517375/1‑93 (MQ=255)
ggATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAAc < 1:4675651/93‑1 (MQ=255)
ggATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAAc > 2:6079829/1‑93 (MQ=255)
gATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACa > 2:323795/1‑93 (MQ=255)
gATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACa < 1:4453719/93‑1 (MQ=255)
aTTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACAt > 2:300568/1‑93 (MQ=255)
aTTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACAt > 2:1139785/1‑93 (MQ=255)
tttACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATc > 2:5645563/1‑93 (MQ=255)
ttACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCa < 2:4978561/93‑1 (MQ=255)
tACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCaa < 1:5219815/93‑1 (MQ=255)
tACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCaa < 1:5170803/93‑1 (MQ=255)
tACCGGCAACGGGCAGCGGTTGCCTGGAGGAAATATCGGCTAAACGCACCCCGTAGCCGTCCCTTCAGGAGTTCTCAAACCCCGGAACCTCaa > 2:1476212/1‑93 (MQ=255)
cGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAgcg > 1:3348938/1‑93 (MQ=255)
cGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAgcg < 1:3459456/93‑1 (MQ=255)
ggCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAgcgg < 2:3956308/93‑1 (MQ=255)
aaCGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGa < 2:3058250/93‑1 (MQ=255)
aCGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAgcggcgga > 2:3126677/1‑91 (MQ=255)
aCGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAgcggcgca > 2:3670389/1‑91 (MQ=255)
gggCAGCGTTTGCCTGGAGGCAATATCGGCTAAACGCGCCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAAc < 2:274432/93‑1 (MQ=255)
gggCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGaagc < 1:2176196/93‑3 (MQ=255)
gggCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAAc < 1:184269/93‑1 (MQ=255)
gCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGa > 1:3693954/1‑93 (MQ=255)
gCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGa < 1:1645342/93‑1 (MQ=255)
gCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGa < 2:1241306/93‑1 (MQ=255)
cAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGAc < 2:3976710/93‑1 (MQ=255)
gCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACAt < 1:3554681/93‑1 (MQ=255)
gCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACAt > 2:1790276/1‑93 (MQ=255)
cGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACAtc > 1:5162010/1‑93 (MQ=255)
cGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACAtc < 1:5805478/93‑1 (MQ=255)
ggTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAAACCCGGAACATCAAGCGGCGAAACGACAtcg > 2:2415271/1‑93 (MQ=255)
gTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACAtcgc > 2:1232717/1‑93 (MQ=255)
gTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACAtcgc > 1:1026375/1‑93 (MQ=255)
ttGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACAtcgct < 1:1296819/93‑1 (MQ=255)
tGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACAtcgctc < 2:5710546/93‑1 (MQ=255)
tGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACAtcgctc > 2:2374443/1‑93 (MQ=255)
|
CGGTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCCGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCG > NC_000913/865287‑865466
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACCGGTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCCGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCGCCAG > NC_000913/865284‑865470
|
CACCGGTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCT > SRR4302533.5860104/1‑94 (MQ=60)
CACCGGTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCT > SRR4302533.6124048/1‑94 (MQ=60)
CCGGTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGG > SRR4302533.2129360/1‑94 (MQ=60)
CGGTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGA > SRR4302533.5729114/1‑94 (MQ=60)
CGGTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGA > SRR4302533.3298031/1‑94 (MQ=60)
GTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGG > SRR4302533.3744397/1‑94 (MQ=60)
TCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGC < SRR4302533.5489700/94‑1 (MQ=60)
CATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCA < SRR4302533.4450114/94‑1 (MQ=60)
CATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCA < SRR4302533.3662231/94‑1 (MQ=60)
ATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGACGCAA > SRR4302533.3907808/1‑94 (MQ=60)
TAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAATGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAAT < SRR4302533.2217969/94‑1 (MQ=60)
AATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATA > SRR4302533.2445060/1‑94 (MQ=60)
TACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATC < SRR4302533.3231216/94‑1 (MQ=60)
ACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCG < SRR4302533.5684200/94‑1 (MQ=60)
ACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCG < SRR4302533.4539876/94‑1 (MQ=60)
CGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGG < SRR4302533.1106120/94‑1 (MQ=60)
AATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCT < SRR4302533.2039915/94‑1 (MQ=60)
ATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTA < SRR4302533.2951836/94‑1 (MQ=60)
ATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTA < SRR4302533.640948/94‑1 (MQ=60)
TGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAA < SRR4302533.465262/94‑1 (MQ=60)
CAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAAC > SRR4302533.5162704/1‑94 (MQ=60)
AGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACG > SRR4302533.1603167/1‑94 (MQ=60)
AGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACG < SRR4302533.840890/94‑1 (MQ=60)
TACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCCAAGGATTTACCGGCCACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCAC > SRR4302533.600618/1‑94 (MQ=60)
TACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCAC < SRR4302533.2316712/94‑1 (MQ=60)
ACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACC > SRR4302533.2142500/1‑94 (MQ=60)
ACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACC < SRR4302533.5268031/94‑1 (MQ=60)
ACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACC > SRR4302533.1142776/1‑94 (MQ=60)
CCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGC < SRR4302533.5117186/94‑1 (MQ=60)
CCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGC < SRR4302533.415304/94‑1 (MQ=60)
CAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTA > SRR4302533.1433598/1‑94 (MQ=60)
AGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAG > SRR4302533.3613133/1‑94 (MQ=60)
CCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCG > SRR4302533.1420916/1‑94 (MQ=60)
CCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCG > SRR4302533.2640737/1‑94 (MQ=60)
CCATTCACCATGGTATGGCCGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCG > SRR4302533.2892333/1‑94 (MQ=60)
CATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGT < SRR4302533.4216431/94‑1 (MQ=60)
CATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGT > SRR4302533.3078648/1‑94 (MQ=60)
CATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGT > SRR4302533.4836792/1‑94 (MQ=60)
ATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCATAGCCGTC > SRR4302533.2963889/1‑94 (MQ=60)
TTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCC > SRR4302533.5745039/1‑94 (MQ=60)
TCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCA < SRR4302533.3985317/94‑1 (MQ=60)
TCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCA < SRR4302533.5244299/94‑1 (MQ=60)
CACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCAT > SRR4302533.2683265/1‑94 (MQ=60)
CACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCAT > SRR4302533.233713/1‑94 (MQ=60)
CACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCAT < SRR4302533.5281903/94‑1 (MQ=60)
ACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATT > SRR4302533.1946258/1‑94 (MQ=60)
CCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTG > SRR4302533.5628725/1‑94 (MQ=60)
CCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTG > SRR4302533.2560249/1‑94 (MQ=60)
CCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTG > SRR4302533.3522829/1‑94 (MQ=60)
CATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGC > SRR4302533.5789035/1‑94 (MQ=60)
CATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGC < SRR4302533.401858/94‑1 (MQ=60)
ATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCG > SRR4302533.855460/1‑94 (MQ=60)
ATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCG < SRR4302533.6061407/94‑1 (MQ=60)
ATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCG > SRR4302533.901167/1‑94 (MQ=60)
ATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCG < SRR4302533.269826/94‑1 (MQ=60)
ATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCG > SRR4302533.1607416/1‑94 (MQ=60)
GTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAG > SRR4302533.1847834/1‑94 (MQ=60)
GTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAG < SRR4302533.296873/94‑1 (MQ=60)
TATGGCTGACCGACAAACGATATACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGT < SRR4302533.429895/94‑1 (MQ=60)
ATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTT < SRR4302533.1127813/94‑1 (MQ=60)
GGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTAT < SRR4302533.1126827/94‑1 (MQ=60)
GGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTAT < SRR4302533.612398/94‑1 (MQ=60)
GCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGGAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATC > SRR4302533.3102900/1‑94 (MQ=60)
CTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCA < SRR4302533.5754170/94‑1 (MQ=60)
CTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCA > SRR4302533.2451851/1‑94 (MQ=60)
CTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCA > SRR4302533.4405940/1‑94 (MQ=60)
GACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAA < SRR4302533.368323/94‑1 (MQ=60)
GACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAA < SRR4302533.1428959/94‑1 (MQ=60)
ACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAAC < SRR4302533.3715461/94‑1 (MQ=60)
CCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACC < SRR4302533.4120618/94‑1 (MQ=60)
CCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACC > SRR4302533.1887686/1‑94 (MQ=60)
CCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACC > SRR4302533.2886016/1‑94 (MQ=60)
CCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACC < SRR4302533.3790692/94‑1 (MQ=60)
GCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCG < SRR4302533.917229/94‑1 (MQ=60)
GCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCG < SRR4302533.1952750/94‑1 (MQ=60)
CAAAGGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGA > SRR4302533.6010613/1‑94 (MQ=60)
GGATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACA < SRR4302533.4703987/94‑1 (MQ=60)
GATTTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACAT < SRR4302533.4480648/94‑1 (MQ=60)
TTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAGACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAA > SRR4302533.4471758/1‑94 (MQ=60)
TTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAA > SRR4302533.1221471/1‑94 (MQ=60)
TTACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAA < SRR4302533.211365/94‑1 (MQ=60)
TACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAG > SRR4302533.2227529/1‑94 (MQ=60)
TACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAG < SRR4302533.5202008/94‑1 (MQ=60)
TACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAG < SRR4302533.5202009/94‑1 (MQ=60)
TACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAG < SRR4302533.5251231/94‑1 (MQ=60)
ACCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGC > SRR4302533.4563903/1‑94 (MQ=60)
CCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCG < SRR4302533.2691427/94‑1 (MQ=60)
CCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCG < SRR4302533.1623947/94‑1 (MQ=60)
CCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCG < SRR4302533.468657/94‑1 (MQ=60)
CCGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCG > SRR4302533.3369629/1‑94 (MQ=60)
CGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGG < SRR4302533.3178780/94‑1 (MQ=60)
CGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGG < SRR4302533.3480811/94‑1 (MQ=60)
CGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGG > SRR4302533.3415823/1‑94 (MQ=60)
CGGCAACGGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGG < SRR4302533.4509116/94‑1 (MQ=60)
GGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAGCG < SRR4302533.2189610/94‑1 (MQ=60)
GGGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACG < SRR4302533.185415/94‑1 (MQ=60)
GGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGA < SRR4302533.983578/94‑1 (MQ=60)
GGCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGA > SRR4302533.3716645/1‑94 (MQ=60)
GCAGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGAC < SRR4302533.1655304/94‑1 (MQ=60)
AGCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACAT > SRR4302533.5964111/1‑94 (MQ=60)
GCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATC > SRR4302533.5193173/1‑94 (MQ=60)
GCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATC < SRR4302533.5033941/94‑1 (MQ=60)
GCGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATC < SRR4302533.3576585/94‑1 (MQ=60)
CGGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCG < SRR4302533.5840534/94‑1 (MQ=60)
GGTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGC > SRR4302533.1032405/1‑94 (MQ=60)
GTTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCT < SRR4302533.6101687/94‑1 (MQ=60)
TTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTC < SRR4302533.3722218/94‑1 (MQ=60)
TTGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTC < SRR4302533.1304625/94‑1 (MQ=60)
TGCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCG < SRR4302533.3931393/94‑1 (MQ=60)
GCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCGC > SRR4302533.3647626/1‑94 (MQ=60)
GCCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCGC < SRR4302533.5840305/94‑1 (MQ=60)
CCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCGCC > SRR4302533.341606/1‑94 (MQ=60)
CCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCGCC > SRR4302533.1530402/1‑94 (MQ=60)
CCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCGCC > SRR4302533.1218590/1‑94 (MQ=60)
CCTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCGCC > SRR4302533.5085700/1‑94 (MQ=60)
CTGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCGCCA > SRR4302533.4874408/1‑94 (MQ=60)
CTGGAGGCAATATCGACTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCAGGAACATCAAGCGGCGAAACGACAACGCTCGCCA < SRR4302533.5897807/94‑1 (MQ=60)
TGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCGCCAG > SRR4302533.2151164/1‑94 (MQ=60)
|
CACCGGTCATAATACGAATGCAGGTACCCGCAGGCCATTCACCATGGTATGGCTGACCGGCAAAGGATTTACCGGCAACGGGCAGCGGTTGCCCGGAGGCAATATCGGCTAAACGCACCGCGTAGCCGTCCATTGCGGAGTTATCAAACCCCGGAACATCAAGCGGCGAAACGACATCGCTCGCCAG > NC_000913/865284‑865470
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
