Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
866,644 |
A→G |
N285S (AAT→AGT) |
ybiK → |
putative asparaginase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 866,644 | 0 | A | G | 99.5%
| 628.4
/ NA
| 199 | N285S (AAT→AGT) | ybiK | putative asparaginase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (92/106); total (93/106) |
| Fisher's exact test for biased strand distribution p-value = 4.67e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 207 total aligned reads displayed.
GTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAG > NC_000913/866554‑866733
|
gTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTg < 2:1949423/93‑1 (MQ=255)
gTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTg < 2:4907330/93‑1 (MQ=255)
ctcGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTc < 2:4490330/93‑1 (MQ=255)
tcGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTcg < 2:3984458/93‑1 (MQ=255)
tcGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTcg < 1:2387897/93‑1 (MQ=255)
cgcgGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTcgc < 2:6168099/93‑1 (MQ=255)
cgcgGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTcgc > 2:3401896/1‑93 (MQ=255)
gcgGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTcgcg > 2:146691/1‑93 (MQ=255)
ggAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCt > 1:3014010/1‑93 (MQ=255)
ggAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCt < 2:3727307/93‑1 (MQ=255)
gAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTa > 1:1447366/1‑93 (MQ=255)
aaGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTAc < 1:5641987/93‑1 (MQ=255)
aaGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTAc < 2:3389320/93‑1 (MQ=255)
aGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTAcc > 2:1318564/1‑93 (MQ=255)
gCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCg > 2:5301951/1‑93 (MQ=255)
cTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGtt > 2:2316756/1‑93 (MQ=255)
cTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGtt > 1:3078997/1‑93 (MQ=255)
tGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGttt < 1:599457/93‑1 (MQ=255)
cGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTaa < 1:1649501/93‑1 (MQ=255)
aGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAaca < 1:1927495/93‑1 (MQ=255)
aGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAaca > 2:5360757/1‑93 (MQ=255)
aGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAaca > 1:1279801/1‑93 (MQ=255)
gCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAacac > 1:744262/1‑93 (MQ=255)
gggTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCg > 2:2653223/1‑93 (MQ=255)
gggCAGTAATGGAAAAAATCCCTGCGCTTGGCGGTAGCGGTGGATTAATAGCTATCGACCATGAAGGGAGAGTAGCGCTACCGTTTAACACCg > 2:5612001/1‑93 (MQ=255)
ggTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGa < 1:1548498/93‑1 (MQ=255)
gtagtaATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGaa > 2:5922623/1‑93 (MQ=255)
gtagtaATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGaa < 2:2049558/93‑1 (MQ=255)
gtagtaATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGaa > 2:1781004/1‑93 (MQ=255)
gtagtaATGGAAAAACTCCCTGCGCTCGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGaa < 1:1494503/93‑1 (MQ=255)
agtaATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGTCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAgg < 2:3564749/93‑1 (MQ=255)
agtaATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAgg > 2:1181795/1‑93 (MQ=255)
gtaATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGa > 2:2109485/1‑93 (MQ=255)
taATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGaa < 2:2813360/93‑1 (MQ=255)
taATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGaa < 2:3872335/93‑1 (MQ=255)
taATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGaa < 1:4629482/93‑1 (MQ=255)
taATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGaa > 2:1673344/1‑93 (MQ=255)
aaTGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGTAGGAAt > 1:3468139/1‑93 (MQ=255)
aaTGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAAt < 1:3955399/93‑1 (MQ=255)
aaTGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAAt > 2:100126/1‑93 (MQ=255)
aTGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATg < 2:1934495/93‑1 (MQ=255)
aTGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATg > 2:4835741/1‑93 (MQ=255)
aTGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATg > 1:1128697/1‑93 (MQ=255)
tGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGt > 1:1970098/1‑93 (MQ=255)
ggAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTaa > 1:634059/1‑78 (MQ=255)
ggAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTaa < 2:634059/78‑1 (MQ=255)
gAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTAt > 2:5402499/1‑93 (MQ=255)
aaaaaCTCCCTGCGCTTGGCGGTAGCGGTGGGTTAATCGCTATCGACCATGAAGGGAGTGGCGCGCTACCGTTTAACACCGAAGGAATGTATc < 1:3914023/93‑1 (MQ=255)
aaaaaCTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATc < 2:4118013/93‑1 (MQ=255)
aaaaaCTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATc > 1:5019027/1‑93 (MQ=255)
aaaaCTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATcg < 1:3276122/93‑1 (MQ=255)
aCTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCgcgc > 1:5222387/1‑93 (MQ=255)
cTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGcc < 1:2815989/93‑1 (MQ=255)
cTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGcc < 2:3242457/93‑1 (MQ=255)
tCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCt < 2:2726333/93‑1 (MQ=255)
tCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCt < 2:55420/93‑1 (MQ=255)
tCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCt > 2:1732953/1‑93 (MQ=255)
ccTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTgg < 2:6248287/93‑1 (MQ=255)
ccTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTgg > 1:2610747/1‑93 (MQ=255)
ccTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTgg < 2:3527779/93‑1 (MQ=255)
cTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTggg < 1:1334634/93‑1 (MQ=255)
gcgcTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGc < 1:4651984/93‑1 (MQ=255)
gcgcTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGc > 1:3668146/1‑93 (MQ=255)
gcTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTa < 1:1081423/93‑1 (MQ=255)
cTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTAc < 1:4387279/93‑1 (MQ=255)
ttGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACg > 2:2336414/1‑93 (MQ=255)
ttGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACg < 1:3535038/93‑1 (MQ=255)
ggCGGTAGCGGTGGCTTAATCGCTATCGACCATGAACGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCa < 2:1504084/93‑1 (MQ=255)
gCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAg < 1:2517172/93‑1 (MQ=255)
cGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAgg < 2:708485/93‑1 (MQ=255)
ggTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGc < 2:744920/93‑1 (MQ=255)
tAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGa < 1:2051483/93‑1 (MQ=255)
gCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATa < 1:4139192/93‑1 (MQ=255)
gCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATa < 1:2000475/93‑1 (MQ=255)
ggTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACg < 1:5859528/93‑1 (MQ=255)
ggTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACg > 1:4560484/1‑93 (MQ=255)
tGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGcc > 2:5676654/1‑93 (MQ=255)
gCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCaa > 2:1555599/1‑93 (MQ=255)
gCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCaa > 2:1099346/1‑93 (MQ=255)
ttAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAacc > 2:5062942/1‑93 (MQ=255)
aTCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCCGGCGATACGCCCaccacc > 2:3081914/1‑93 (MQ=255)
aTCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAaccacc < 1:4409482/93‑1 (MQ=255)
tCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCg < 1:876598/93‑1 (MQ=255)
tCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCg > 2:4739029/1‑93 (MQ=255)
tCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCg > 2:465046/1‑93 (MQ=255)
cGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCgg < 1:3770871/93‑1 (MQ=255)
gCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGt < 2:505096/93‑1 (MQ=255)
tATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTAt > 1:2183336/1‑93 (MQ=255)
aTCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATc < 1:1616900/93‑1 (MQ=255)
aCCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTAcc < 2:580525/93‑1 (MQ=255)
cATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGCCTACGCAGGCGATACGCCAACCACCGGTATCTACCGt < 1:6235376/93‑1 (MQ=255)
tGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGa > 2:4253611/1‑93 (MQ=255)
tGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGa > 1:5336976/1‑93 (MQ=255)
gAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGaa > 2:2967622/1‑93 (MQ=255)
aGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGaaaa > 1:40853/1‑93 (MQ=255)
gggAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGaaaaa > 2:4163609/1‑93 (MQ=255)
gggAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGaaaaa < 1:3513662/93‑1 (MQ=255)
ggAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAg < 2:5416374/93‑1 (MQ=255)
ggAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAg < 2:4471158/93‑1 (MQ=255)
ggAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAg > 1:912780/1‑93 (MQ=255)
|
GTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAG > NC_000913/866554‑866733
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGA > NC_000913/866552‑866737
|
AAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGT < SRR4302533.3275091/94‑1 (MQ=60)
AAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGT < SRR4302533.4832203/94‑1 (MQ=60)
AAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGT < SRR4302533.1775383/94‑1 (MQ=60)
AAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGT < SRR4302533.349544/94‑1 (MQ=60)
AGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTG < SRR4302533.3840457/94‑1 (MQ=60)
AGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTG < SRR4302533.6221213/94‑1 (MQ=60)
CTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCG > SRR4302533.3614321/1‑94 (MQ=60)
TCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGC < SRR4302533.2402649/94‑1 (MQ=60)
CGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCG < SRR4302533.6255087/94‑1 (MQ=60)
CGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCT > SRR4302533.3032444/1‑94 (MQ=60)
GGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTA > SRR4302533.3491259/1‑94 (MQ=60)
GGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTA > SRR4302533.1456098/1‑94 (MQ=60)
AAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACC < SRR4302533.689625/94‑1 (MQ=60)
AAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACC < SRR4302533.5676087/94‑1 (MQ=60)
AGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCG > SRR4302533.1553529/1‑94 (MQ=60)
CCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTT > SRR4302533.3097890/1‑94 (MQ=60)
CTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTT < SRR4302533.4252691/94‑1 (MQ=60)
TGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTA < SRR4302533.602985/94‑1 (MQ=60)
GCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAA < SRR4302533.2892882/94‑1 (MQ=60)
CGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAAC < SRR4302533.1659495/94‑1 (MQ=60)
GAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACA > SRR4302533.1287493/1‑94 (MQ=60)
AGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACAC < SRR4302533.1939256/94‑1 (MQ=60)
AGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACAC > SRR4302533.748643/1‑94 (MQ=60)
GCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACC < SRR4302533.1754172/94‑1 (MQ=60)
GCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACC < SRR4302533.2579575/94‑1 (MQ=60)
GCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACC < SRR4302533.2405009/94‑1 (MQ=60)
GGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAA < SRR4302533.1557829/94‑1 (MQ=60)
GGTAGTAATGGAAAAACTCCCTGAGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAA > SRR4302533.3536492/1‑94 (MQ=60)
GTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAG < SRR4302533.907653/94‑1 (MQ=60)
GTAGTAATGGAAAAACTCCCTGCGCTCGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAG < SRR4302533.1503510/94‑1 (MQ=60)
GTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACAACGAAGGAA > SRR4302533.5999468/1‑94 (MQ=60)
TAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGTAGGAAT > SRR4302533.3489547/1‑94 (MQ=60)
TAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAAT < SRR4302533.4657543/94‑1 (MQ=60)
AATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATG > SRR4302533.4607620/1‑94 (MQ=60)
AATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATG < SRR4302533.3979511/94‑1 (MQ=60)
AATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATG > SRR4302533.1135403/1‑94 (MQ=60)
ATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGT > SRR4302533.1982148/1‑94 (MQ=60)
ATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGT > SRR4302533.1982147/1‑94 (MQ=60)
ATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGT > SRR4302533.5274899/1‑94 (MQ=60)
TGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACAtacagcagatcgg > SRR4302533.637790/1‑81 (MQ=60)
GGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTAT < SRR4302533.413030/94‑1 (MQ=60)
GGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTAT < SRR4302533.5077856/94‑1 (MQ=60)
GAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATC < SRR4302533.134002/94‑1 (MQ=60)
GAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATC > SRR4302533.5049424/1‑94 (MQ=60)
GAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATC < SRR4302533.3952581/94‑1 (MQ=60)
AAAAACTCCCTGCGCTTGGCGGTAGCGGTGGGTTAATCGCTATCGACCATGAAGGGAGTGGCGCGCTACCGTTTAACACCGAAGGAATGTATCG < SRR4302533.3937931/94‑1 (MQ=60)
AAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCG > SRR4302533.951581/1‑94 (MQ=60)
AAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCG < SRR4302533.1656293/94‑1 (MQ=60)
AAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGC < SRR4302533.3296353/94‑1 (MQ=60)
AAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCG < SRR4302533.3385036/94‑1 (MQ=60)
AACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGC > SRR4302533.5253809/1‑94 (MQ=60)
CTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCT < SRR4302533.2833326/94‑1 (MQ=60)
CTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCT < SRR4302533.3926732/94‑1 (MQ=60)
TCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTG > SRR4302533.4670414/1‑94 (MQ=60)
CCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGG > SRR4302533.2626772/1‑94 (MQ=60)
CCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGG < SRR4302533.1210202/94‑1 (MQ=60)
CCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGG < SRR4302533.2507402/94‑1 (MQ=60)
CTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGG < SRR4302533.1342643/94‑1 (MQ=60)
TGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGC > SRR4302533.3690691/1‑94 (MQ=60)
GCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCT < SRR4302533.4680173/94‑1 (MQ=60)
GCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTAC < SRR4302533.1087804/94‑1 (MQ=60)
CTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACG < SRR4302533.4413766/94‑1 (MQ=60)
TTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGC < SRR4302533.3556822/94‑1 (MQ=60)
TGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCA < SRR4302533.4150059/94‑1 (MQ=60)
GCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGG < SRR4302533.2532683/94‑1 (MQ=60)
CGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGC < SRR4302533.571077/94‑1 (MQ=60)
TAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGAT < SRR4302533.2064141/94‑1 (MQ=60)
GCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATAC < SRR4302533.4164298/94‑1 (MQ=60)
GCGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATAC < SRR4302533.2012789/94‑1 (MQ=60)
CGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACG < SRR4302533.6274876/94‑1 (MQ=60)
CGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACG > SRR4302533.3066902/1‑94 (MQ=60)
CGGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACG > SRR4302533.4588146/1‑94 (MQ=60)
GGTGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGC < SRR4302533.5894951/94‑1 (MQ=60)
TGGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCA < SRR4302533.1098980/94‑1 (MQ=60)
GGCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAA > SRR4302533.2346668/1‑94 (MQ=60)
GCTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAAC > SRR4302533.3791040/1‑94 (MQ=60)
CTTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACC > SRR4302533.1558404/1‑94 (MQ=60)
TTAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCA > SRR4302533.1346241/1‑94 (MQ=60)
TAATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCAC > SRR4302533.738821/1‑94 (MQ=60)
AATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACC < SRR4302533.4529055/94‑1 (MQ=60)
ATCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCG < SRR4302533.4436109/94‑1 (MQ=60)
TCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGG < SRR4302533.881745/94‑1 (MQ=60)
TCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGG < SRR4302533.4821269/94‑1 (MQ=60)
TCGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGG > SRR4302533.3192751/1‑94 (MQ=60)
CGCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGT < SRR4302533.3793989/94‑1 (MQ=60)
GCTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTA < SRR4302533.85577/94‑1 (MQ=60)
CTATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTAT > SRR4302533.2196797/1‑94 (MQ=60)
TATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATC > SRR4302533.3995232/1‑94 (MQ=60)
TATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATC < SRR4302533.2185574/94‑1 (MQ=60)
ATCGCCCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCT < SRR4302533.147630/94‑1 (MQ=60)
ATCGACCATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCT < SRR4302533.1626699/94‑1 (MQ=60)
CATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTG < SRR4302533.2660232/94‑1 (MQ=60)
CATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTG < SRR4302533.2046049/94‑1 (MQ=60)
CATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGCCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTG < SRR4302533.6272718/94‑1 (MQ=60)
ATGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGA > SRR4302533.5368969/1‑94 (MQ=60)
TGAAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAA > SRR4302533.1218803/1‑94 (MQ=60)
AAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAA > SRR4302533.41131/1‑94 (MQ=60)
AAGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAA > SRR4302533.4421750/1‑94 (MQ=60)
AGGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAA > SRR4302533.1949363/1‑94 (MQ=60)
GGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAG < SRR4302533.3535323/94‑1 (MQ=60)
GGGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAG > SRR4302533.918135/1‑94 (MQ=60)
GGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTTGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGCGAAAAAGG > SRR4302533.67534/1‑94 (MQ=60)
GGAGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGG < SRR4302533.5593101/94‑1 (MQ=60)
AGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGG < SRR4302533.1475016/94‑1 (MQ=60)
AGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGG < SRR4302533.1193021/94‑1 (MQ=60)
AGTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGG < SRR4302533.4832875/94‑1 (MQ=60)
GTGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGA < SRR4302533.2060667/94‑1 (MQ=60)
|
AAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGA > NC_000913/866552‑866737
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
