Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
908,737 |
T→C |
Q512Q (CAA→CAG) |
poxB ← |
pyruvate oxidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 908,737 | 0 | T | C | 100.0%
| 622.9
/ NA
| 195 | Q512Q (CAA→CAG) | poxB | pyruvate oxidase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (80/115); total (80/115) |
Only 100 of 201 total aligned reads displayed.
TGTTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGTTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTCGTG > NC_000913/908648‑908826
|
tGTTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGc < 2:2840804/93‑1 (MQ=255)
tGTTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGc < 2:4582363/93‑1 (MQ=255)
ttCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAg < 1:964103/93‑1 (MQ=255)
ttCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAg < 2:5517391/93‑1 (MQ=255)
ttCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAg > 1:718445/1‑93 (MQ=255)
cGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAggg > 1:701575/1‑93 (MQ=255)
gAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGc < 1:526576/93‑1 (MQ=255)
gAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGc < 2:1261360/93‑1 (MQ=255)
aGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCt < 1:5789142/93‑1 (MQ=255)
aGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCt < 1:4234681/93‑1 (MQ=255)
aGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCt > 1:2277376/1‑93 (MQ=255)
gTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCtt > 2:5674103/1‑93 (MQ=255)
gTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCtt < 1:2116787/93‑1 (MQ=255)
tttGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTtc > 2:2056991/1‑93 (MQ=255)
tttGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTtc < 1:2384010/93‑1 (MQ=255)
ttGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTtca < 2:4489391/93‑1 (MQ=255)
gtcggCGTTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTtcatca < 1:6084823/89‑1 (MQ=255)
aTCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTtcatca > 2:3905074/1‑93 (MQ=255)
cTGCGGTGGAATGGCTAACTCTTCTTTGGCCACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAAc < 1:2529978/93‑1 (MQ=255)
atGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCAACCATCTCCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAAc < 1:6305308/92‑1 (MQ=255)
tGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACt < 2:400771/93‑1 (MQ=255)
cGGTGGAATGGCTAGCTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTc < 1:449119/93‑1 (MQ=255)
cGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTc < 2:4154830/93‑1 (MQ=255)
cGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTc < 1:4637658/93‑1 (MQ=255)
cGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTc < 2:2986481/93‑1 (MQ=255)
ggTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCa > 1:1528515/1‑93 (MQ=255)
ggTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCa > 1:5137274/1‑93 (MQ=255)
gggAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGa < 2:2347798/92‑1 (MQ=255)
ggAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGAc > 1:2216735/1‑93 (MQ=255)
aTGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCt < 2:2160040/93‑1 (MQ=255)
tGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCtt < 2:4434220/93‑1 (MQ=255)
tGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCtt > 1:129723/1‑93 (MQ=255)
tGGCTAACGCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCtt > 2:2806106/1‑93 (MQ=255)
tAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTc > 2:1898875/1‑93 (MQ=255)
tAACTCTTCGTTGGCGACCCCGACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGCCTTCATCAACTTCAGACGCTTTTTc < 2:3702569/93‑1 (MQ=255)
aaCTCTTCTTTGGCGACCACCACATCGACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCt < 2:5090404/93‑1 (MQ=255)
ctctTCTTTGGCGACCACCACATCCACCAGCACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTac < 2:6190581/93‑1 (MQ=255)
tcttctTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTaca > 1:5057193/1‑93 (MQ=255)
tcttctTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTaca < 1:493925/93‑1 (MQ=255)
tcttctTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTaca < 1:5545960/93‑1 (MQ=255)
tcttctTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTaca < 2:495744/93‑1 (MQ=255)
cttcttTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTacac < 2:2555116/93‑1 (MQ=255)
cttcttTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTacac > 2:593164/1‑93 (MQ=255)
ttcttTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACg > 2:2625675/1‑93 (MQ=255)
ttcttTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACg > 1:4118889/1‑93 (MQ=255)
tttGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGAt < 1:851455/93‑1 (MQ=255)
ttGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATa > 1:5653005/1‑93 (MQ=255)
ttGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATa < 2:823100/93‑1 (MQ=255)
ggCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATAcc > 2:5471092/1‑93 (MQ=255)
gCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATAccc < 2:3356608/93‑1 (MQ=255)
gACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGt < 1:1673200/93‑1 (MQ=255)
gACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGt > 2:6101353/1‑93 (MQ=255)
accaccACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTa < 2:1174602/93‑1 (MQ=255)
accaccACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTa > 2:3258643/1‑93 (MQ=255)
ccaccaCATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTaa > 1:1232094/1‑93 (MQ=255)
caccacATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAAt < 1:5204533/93‑1 (MQ=255)
cccacATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATg < 2:596099/92‑1 (MQ=255)
cccacATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATg < 2:3140146/92‑1 (MQ=255)
accacATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATg > 1:4748916/1‑93 (MQ=255)
ccacATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGc < 1:930657/93‑1 (MQ=255)
cacaTCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGcc > 1:1000679/1‑93 (MQ=255)
tCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCAc < 1:3102689/93‑1 (MQ=255)
caccaccacCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGc < 2:446919/93‑1 (MQ=255)
caccaACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGc > 2:3186940/1‑93 (MQ=255)
accaACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCt > 1:4015473/1‑93 (MQ=255)
accaACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCt < 1:3540755/93‑1 (MQ=255)
caACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATCCCCGTAATGCCGCACGCTTc < 2:5456431/93‑1 (MQ=255)
caACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTc < 1:3043691/93‑1 (MQ=255)
caACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTc < 1:2060837/93‑1 (MQ=255)
caACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTc < 2:147747/93‑1 (MQ=255)
aaCACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCg > 2:1798509/1‑93 (MQ=255)
cacCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGc < 1:2756200/93‑1 (MQ=255)
ccGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCaa < 1:4787919/93‑1 (MQ=255)
ggACCGTCGATGGAGGAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCCGCAATg > 2:5588400/1‑93 (MQ=255)
gACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGc < 2:5391150/93‑1 (MQ=255)
aCCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCg < 1:2572813/93‑1 (MQ=255)
ccGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCgg < 2:4323942/93‑1 (MQ=255)
ccGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCgg < 2:1384246/93‑1 (MQ=255)
cGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCggg < 1:6197434/93‑1 (MQ=255)
gTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGc < 1:6132604/93‑1 (MQ=255)
cGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATCCCCGTAATGCCGCACGCTTCGGCAATGCGGGCaa < 2:607208/93‑1 (MQ=255)
gATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCaaa < 1:1376202/93‑1 (MQ=255)
gATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCaaa < 2:5358558/93‑1 (MQ=255)
aTGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAg < 1:6095943/93‑1 (MQ=255)
aTGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAg > 1:1933101/1‑93 (MQ=255)
tGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATGCCCGTAATGCCGCACGCTTCGGCAATGCGGTCAAAGt < 1:5436834/93‑1 (MQ=255)
tGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGt < 2:2222208/93‑1 (MQ=255)
ggAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGtt < 2:1931431/93‑1 (MQ=255)
ggAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGtt < 1:2927449/93‑1 (MQ=255)
gagaAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGttt < 1:4291957/93‑1 (MQ=255)
gagaAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGttt > 2:5843642/1‑93 (MQ=255)
agaAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTtg < 1:3577637/93‑1 (MQ=255)
gaAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTtgt > 1:4919838/1‑93 (MQ=255)
gaAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTtgt > 2:715887/1‑93 (MQ=255)
aaGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTtgtg < 2:682173/93‑1 (MQ=255)
aGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTgtgt > 2:1840991/1‑93 (MQ=255)
ggCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTc < 2:1999482/93‑1 (MQ=255)
ggCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTc < 2:294824/93‑1 (MQ=255)
gcgcTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTCgtg < 1:4977779/93‑1 (MQ=255)
gcgcTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTCgtg < 1:130585/93‑1 (MQ=255)
|
TGTTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGTTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTCGTG > NC_000913/908648‑908826
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCTGTTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGTTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTCGTGTAGT > NC_000913/908645‑908830
|
GCCTGTTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCT > SRR4302533.2261966/1‑94 (MQ=60)
GCCTGTTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCT > SRR4302533.1423378/1‑94 (MQ=60)
GCCTGTTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCT > SRR4302533.6309087/1‑94 (MQ=60)
GTTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCTACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAG < SRR4302533.6273622/94‑1 (MQ=60)
GTTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAG < SRR4302533.5363522/94‑1 (MQ=60)
GTTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAG > SRR4302533.722685/1‑94 (MQ=60)
TTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGG < SRR4302533.969765/94‑1 (MQ=60)
TCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGG > SRR4302533.705727/1‑94 (MQ=60)
GAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCT < SRR4302533.529697/94‑1 (MQ=60)
GAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCT > SRR4302533.2291479/1‑94 (MQ=60)
GAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCT < SRR4302533.613614/94‑1 (MQ=60)
AGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTT < SRR4302533.4260269/94‑1 (MQ=60)
AGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTT < SRR4302533.5824121/94‑1 (MQ=60)
GTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTC > SRR4302533.2949479/1‑94 (MQ=60)
GTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTC < SRR4302533.2129843/94‑1 (MQ=60)
TTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCA < SRR4302533.2398747/94‑1 (MQ=60)
TTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCAT < SRR4302533.2224524/94‑1 (MQ=60)
gtcggcgtTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAA < SRR4302533.6121613/86‑1 (MQ=60)
ATCTGCGGGGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAA > SRR4302533.5129866/1‑94 (MQ=60)
TCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAAC < SRR4302533.2669515/94‑1 (MQ=60)
CTGCGGTGGAATGGCTAACTCTTCTTTGGCCACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACT < SRR4302533.2545555/94‑1 (MQ=60)
ATGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCAACCATCTCCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACT < SRR4302533.6343038/94‑1 (MQ=60)
TGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTT > SRR4302533.3635138/1‑94 (MQ=60)
GCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTC > SRR4302533.2089569/1‑94 (MQ=60)
CGGTGGAATGGCTAGCTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCA < SRR4302533.451805/94‑1 (MQ=60)
CGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCA > SRR4302533.1593169/1‑94 (MQ=60)
CGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCA < SRR4302533.4665758/94‑1 (MQ=60)
CGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCA < SRR4302533.130288/94‑1 (MQ=60)
CGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCA > SRR4302533.1537711/1‑94 (MQ=60)
CGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCA > SRR4302533.5168318/1‑94 (MQ=60)
GGTAGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAG < SRR4302533.5481978/94‑1 (MQ=60)
TGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGAC > SRR4302533.2230420/1‑94 (MQ=60)
GAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGC > SRR4302533.6122200/1‑94 (MQ=60)
AATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGCTGCAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCT > SRR4302533.25873/1‑94 (MQ=60)
AATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCT > SRR4302533.131290/1‑94 (MQ=60)
ATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTT > SRR4302533.130534/1‑94 (MQ=60)
TGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTT > SRR4302533.2864112/1‑94 (MQ=60)
TGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTT > SRR4302533.4784386/1‑94 (MQ=60)
GCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTT < SRR4302533.2288642/94‑1 (MQ=60)
ACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTAC > SRR4302533.3100388/1‑94 (MQ=60)
CTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACA > SRR4302533.5087757/1‑94 (MQ=60)
TCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACAC < SRR4302533.5579456/94‑1 (MQ=60)
TCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACAC < SRR4302533.496872/94‑1 (MQ=60)
CTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACG > SRR4302533.4143905/1‑94 (MQ=60)
TTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGG < SRR4302533.4364914/94‑1 (MQ=60)
CTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGAT < SRR4302533.1905010/94‑1 (MQ=60)
TTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATA > SRR4302533.2405852/1‑94 (MQ=60)
TTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATA < SRR4302533.1121011/94‑1 (MQ=60)
TTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATA < SRR4302533.856439/94‑1 (MQ=60)
TTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATA > SRR4302533.5687175/1‑94 (MQ=60)
CGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGT > SRR4302533.4266724/1‑94 (MQ=60)
GACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTA > SRR4302533.1366159/1‑94 (MQ=60)
GACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTA < SRR4302533.1683313/94‑1 (MQ=60)
GACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTA < SRR4302533.4819833/94‑1 (MQ=60)
ACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAA > SRR4302533.1239468/1‑94 (MQ=60)
ACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAA > SRR4302533.4685909/1‑94 (MQ=60)
CCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAAT > SRR4302533.961167/1‑94 (MQ=60)
CACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATG < SRR4302533.5235891/94‑1 (MQ=60)
CACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATG > SRR4302533.4777709/1‑94 (MQ=60)
ACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGC > SRR4302533.708087/1‑94 (MQ=60)
CCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCC < SRR4302533.936120/94‑1 (MQ=60)
CCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCC > SRR4302533.1006521/1‑94 (MQ=60)
TCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACG < SRR4302533.3121763/94‑1 (MQ=60)
TCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACG < SRR4302533.856340/94‑1 (MQ=60)
TCCACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACG > SRR4302533.5046627/1‑94 (MQ=60)
CACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCT > SRR4302533.3338564/1‑94 (MQ=60)
CACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCT > SRR4302533.4039923/1‑94 (MQ=60)
ACCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTT < SRR4302533.3562571/94‑1 (MQ=60)
CCAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTC < SRR4302533.2293172/94‑1 (MQ=60)
CAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCG < SRR4302533.2073548/94‑1 (MQ=60)
CAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCG < SRR4302533.526791/94‑1 (MQ=60)
CAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCG < SRR4302533.3062323/94‑1 (MQ=60)
CAACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCG < SRR4302533.6204273/94‑1 (MQ=60)
ACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGC < SRR4302533.5188247/94‑1 (MQ=60)
ACACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGC < SRR4302533.1535897/94‑1 (MQ=60)
CACCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCA < SRR4302533.2773104/94‑1 (MQ=60)
CCGGACCGTGTATGGAGAATGCGCCCTGCAGTGCTTCATCAACTTCAGACGTTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAAT < SRR4302533.1970110/94‑1 (MQ=60)
CCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAAT < SRR4302533.663697/94‑1 (MQ=60)
CCGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAAT < SRR4302533.4816920/94‑1 (MQ=60)
CGGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATG > SRR4302533.4540140/1‑94 (MQ=60)
GGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGC > SRR4302533.3582857/1‑94 (MQ=60)
GGACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGC > SRR4302533.5788877/1‑94 (MQ=60)
ACCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGG < SRR4302533.2588640/94‑1 (MQ=60)
CCGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGG > SRR4302533.4965941/1‑94 (MQ=60)
CGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGC < SRR4302533.5654929/94‑1 (MQ=60)
CGTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGC < SRR4302533.6234614/94‑1 (MQ=60)
GTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCA > SRR4302533.417637/1‑94 (MQ=60)
GTCGATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCA < SRR4302533.6169552/94‑1 (MQ=60)
GATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAG > SRR4302533.1944898/1‑94 (MQ=60)
GATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAG < SRR4302533.1384483/94‑1 (MQ=60)
ATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGT < SRR4302533.5946681/94‑1 (MQ=60)
ATGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGT < SRR4302533.6132767/94‑1 (MQ=60)
TGGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATGCCCGTAATGCCGCACGCTTCGGCAATGCGGTCAAAGTT < SRR4302533.5469578/94‑1 (MQ=60)
GGAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTT < SRR4302533.2945362/94‑1 (MQ=60)
GAGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTG < SRR4302533.4317768/94‑1 (MQ=60)
AGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGT < SRR4302533.3599682/94‑1 (MQ=60)
AGAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGT > SRR4302533.4949641/1‑94 (MQ=60)
GAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTG < SRR4302533.5004585/94‑1 (MQ=60)
GAAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTG < SRR4302533.861382/94‑1 (MQ=60)
AAGGCGCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGT < SRR4302533.4066828/94‑1 (MQ=60)
GCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTCGTGT < SRR4302533.131404/94‑1 (MQ=60)
GCGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTCGTGT < SRR4302533.5007964/94‑1 (MQ=60)
CGCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTCGTGTA > SRR4302533.3879267/1‑94 (MQ=60)
GCTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTCGTGTAG > SRR4302533.4660099/1‑94 (MQ=60)
CTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTCGTGTAGT > SRR4302533.5987948/1‑94 (MQ=60)
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GCCTGTTCGAGTTTGATCTGCGGTGGAATGGCTAACTCTTCTTTGGCGACCACCACATCCACCAACACCGGACCGTCGATGGAGAAGGCGCGTTGCAGGGCTTCATCAACTTCAGACGCTTTTTCTACACGGATACCCGTAATGCCGCACGCTTCGGCAATGCGGGCAAAGTTTGTGTCGTGTAGT > NC_000913/908645‑908830
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
