Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
998,433 |
A→G |
intergenic (+19/‑6) |
ycbR → / → ycbS |
putative chaperone/putative outer membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 998,433 | 0 | A | G | 99.3%
| 472.2
/ NA
| 149 | intergenic (+19/‑6) | ycbR/ycbS | putative chaperone/putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (95/53); total (96/53) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 158 total aligned reads displayed.
AATAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGAGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTC > NC_000913/998343‑998521
|
aaTAGCCGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGc > 2:882323/1‑93 (MQ=255)
aTAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCg < 2:6135063/93‑1 (MQ=255)
tAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCga > 1:4170481/1‑93 (MQ=255)
tAGCAGCGTAACGTATCGAACCATCAATCACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCga < 1:1163771/93‑1 (MQ=255)
gcagcGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTAAAGAGGGCgaga < 2:1757938/93‑1 (MQ=255)
cagcGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGAt < 1:4051695/93‑1 (MQ=255)
gcGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGt < 2:2525902/93‑1 (MQ=255)
cGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGta > 2:5581803/1‑93 (MQ=255)
cGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGta > 1:2585231/1‑93 (MQ=255)
tAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGtata > 2:3443938/1‑93 (MQ=255)
tAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGtata < 2:3667037/93‑1 (MQ=255)
aaCGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAACTCGTATGCCGTCTTCTGCTTGGAAAGCGAGATGTATAg > 1:4023506/1‑93 (MQ=255)
aaCGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAg > 2:3225248/1‑93 (MQ=255)
aCGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGa > 1:5210158/1‑93 (MQ=255)
aTCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTc > 2:4921472/1‑93 (MQ=255)
tCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCa > 1:3082469/1‑93 (MQ=255)
tCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCa > 1:5981069/1‑93 (MQ=255)
aaCCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCg > 2:3970121/1‑93 (MQ=255)
aaCCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCg > 1:5790904/1‑93 (MQ=255)
aCCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGa > 2:2662174/1‑93 (MQ=255)
aCCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGa > 2:1214933/1‑93 (MQ=255)
aCCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGa > 1:3697237/1‑93 (MQ=255)
cATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGaca > 2:3800718/1‑93 (MQ=255)
aaTGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCTGCTAGGAGGGAGAGATGTATAGAACTCATCGACAacac > 1:1683378/1‑93 (MQ=255)
aTGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAAcaca > 1:4853130/1‑93 (MQ=255)
aCTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCACAAACACAGcc > 2:3946894/1‑93 (MQ=255)
cTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCt > 1:3834945/1‑93 (MQ=255)
cTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCt < 2:447204/93‑1 (MQ=255)
aaCGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTg < 1:971694/92‑1 (MQ=255)
ggggCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTa > 2:926633/1‑93 (MQ=255)
ggggCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTa > 2:3837440/1‑93 (MQ=255)
gggCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTaa < 1:2968985/93‑1 (MQ=255)
gCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGc > 2:3668347/1‑93 (MQ=255)
gCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGc < 2:6254697/93‑1 (MQ=255)
ggAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCTGCTAGGAGGGCGAGATGTATAGAACTCATAGACAACACAGCCTGTTAAGctt > 1:4238686/1‑92 (MQ=255)
ggAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGctc > 1:1573725/1‑93 (MQ=255)
gAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCTGCTTGGAGGGCGAAATGCATAGAACTCATCGACAACACAGCCTGTTAAGctcg > 1:5260086/1‑92 (MQ=255)
gAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGctgt > 1:2480421/1‑91 (MQ=255)
gAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGctct > 2:3507035/1‑93 (MQ=255)
gAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGctct > 1:2109884/1‑93 (MQ=255)
gAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGctct > 2:2831555/1‑93 (MQ=255)
gAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGctct < 1:4533429/93‑1 (MQ=255)
gAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGctct < 2:2452044/93‑1 (MQ=255)
aaaCGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCtg < 2:414351/93‑1 (MQ=255)
aaCGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCTGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCtgg > 1:1101525/1‑93 (MQ=255)
aaCGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCtgg > 1:3503934/1‑93 (MQ=255)
aCGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCtggt < 1:5268734/93‑1 (MQ=255)
cgccgcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCtggtg < 2:5452161/93‑1 (MQ=255)
gccgcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCtggtgg < 2:2216630/93‑1 (MQ=255)
cccgcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCtggtgg < 1:2300920/92‑1 (MQ=255)
ccgcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGa > 2:4286734/1‑93 (MQ=255)
ccgcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGa > 2:5775261/1‑93 (MQ=255)
ccgcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGa < 2:4726087/93‑1 (MQ=255)
cgcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAg > 1:5014100/1‑93 (MQ=255)
cgcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAg > 2:3386455/1‑93 (MQ=255)
cgcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAg > 2:1512028/1‑93 (MQ=255)
cgcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAg > 1:1528629/1‑93 (MQ=255)
gcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGt < 1:3565579/93‑1 (MQ=255)
gcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGt > 2:510260/1‑93 (MQ=255)
caactcaactGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTg < 1:4987852/93‑1 (MQ=255)
caactcaactGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTg > 2:3790465/1‑93 (MQ=255)
aactcaactGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGc > 1:1282781/1‑93 (MQ=255)
ctcaactGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCa > 1:788805/1‑93 (MQ=255)
taactGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATc < 1:3182432/92‑1 (MQ=255)
aactGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCg > 1:4972446/1‑93 (MQ=255)
actGTAAATCGTAAGCTGTCTGCAGTTAATAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGt < 2:1074962/93‑1 (MQ=255)
actGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGt < 2:806673/93‑1 (MQ=255)
tGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGttt > 1:270148/1‑93 (MQ=255)
tGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGttt > 2:2335918/1‑93 (MQ=255)
tAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTAt > 1:1363935/1‑93 (MQ=255)
aaTCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATtg > 1:5029933/1‑93 (MQ=255)
aTCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATtgg > 2:728959/1‑93 (MQ=255)
aTCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGAGCCATCGTTTATtgg > 1:2355548/1‑93 (MQ=255)
gTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATtggtgg < 1:4680575/93‑1 (MQ=255)
gTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATtggtgg < 2:6198088/93‑1 (MQ=255)
gTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATtggtgg < 1:5309941/93‑1 (MQ=255)
gTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATtggtgg > 1:866381/1‑93 (MQ=255)
tAAGCCGTCTTCAGCTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTggg > 1:841103/1‑93 (MQ=255)
aGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCt > 1:6185835/1‑93 (MQ=255)
aGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCt > 2:5329028/1‑93 (MQ=255)
gCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtg > 2:698884/1‑93 (MQ=255)
ccGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtgg > 1:4778766/1‑93 (MQ=255)
ccGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtgg < 1:5685440/93‑1 (MQ=255)
ccGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtgg > 2:2932398/1‑93 (MQ=255)
gTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtggtg > 2:508073/1‑93 (MQ=255)
gTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtggtg < 2:2972555/93‑1 (MQ=255)
tatacAGTTAAGAGGGCGAGATTTATACAACTCTTCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCttgtgg < 2:5720777/89‑1 (MQ=255)
tCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtggtgg > 1:4415465/1‑93 (MQ=255)
tCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtggtgg < 1:588933/93‑1 (MQ=255)
cTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTggtggt > 1:2691812/1‑93 (MQ=255)
ttCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGgtggtg > 1:4215338/1‑93 (MQ=255)
ttCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGgtggtg > 2:3023864/1‑93 (MQ=255)
tCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGgtgt < 1:5151655/93‑1 (MQ=255)
aGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGttt > 1:6267662/1‑93 (MQ=255)
aGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGttt > 1:5648793/1‑93 (MQ=255)
gTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTtg < 1:2128708/93‑1 (MQ=255)
gTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTtg < 2:2630064/93‑1 (MQ=255)
ttAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTtgt > 1:2784164/1‑93 (MQ=255)
aaGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTgtgt > 2:4491836/1‑93 (MQ=255)
agagggCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTc > 2:4644643/1‑93 (MQ=255)
|
AATAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGAGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTC > NC_000913/998343‑998521
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAAATAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGAGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCGGCA > NC_000913/998340‑998525
|
AAAAATAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCTTAAGCCGTCTTCAGTTAAGAGG > SRR4302533.4567046/1‑94 (MQ=60)
AAAAATAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGG < SRR4302533.2897438/94‑1 (MQ=60)
AAAAATAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGG > SRR4302533.5400595/1‑94 (MQ=60)
ATAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGA > SRR4302533.4195752/1‑94 (MQ=60)
TAGCAGCGTAACGTATCGAACCATCAATCACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAG < SRR4302533.1170751/94‑1 (MQ=60)
AGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGA < SRR4302533.4605266/94‑1 (MQ=60)
CAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATG < SRR4302533.4076372/94‑1 (MQ=60)
gcgaatggaATCGAACCATCAAGGAGTACGGGGCGGAAGCGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTA < SRR4302533.1123178/85‑1 (MQ=60)
GCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTA > SRR4302533.2601126/1‑94 (MQ=60)
GTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATA > SRR4302533.843027/1‑94 (MQ=60)
GTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATA > SRR4302533.3425749/1‑94 (MQ=60)
TAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAACTCGTATGCCGTCTTCTGCTTGGAAAGCGAGATGTATAG > SRR4302533.4048001/1‑94 (MQ=60)
AACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGA > SRR4302533.5241540/1‑94 (MQ=60)
GTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAACTCGTATGCCGTCTTCTGCTTGGAGGGCGAGATGTATAGAACT > SRR4302533.2877774/1‑94 (MQ=60)
GTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACT > SRR4302533.1529631/1‑94 (MQ=60)
GTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACT < SRR4302533.5121442/94‑1 (MQ=60)
TATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTC > SRR4302533.4237161/1‑94 (MQ=60)
ATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCA > SRR4302533.3101379/1‑94 (MQ=60)
ATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCA < SRR4302533.4995861/94‑1 (MQ=60)
ATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCA > SRR4302533.6017293/1‑94 (MQ=60)
CGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATC < SRR4302533.5769190/94‑1 (MQ=60)
GAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCG > SRR4302533.5825889/1‑94 (MQ=60)
AACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGA > SRR4302533.3719949/1‑94 (MQ=60)
ACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGAC < SRR4302533.5027275/94‑1 (MQ=60)
CCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACA > SRR4302533.3593831/1‑94 (MQ=60)
ATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAAC < SRR4302533.905086/94‑1 (MQ=60)
CAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCTGCTAGGAGGGAGAGATGTATAGAACTCATCGACAACAC > SRR4302533.1693577/1‑94 (MQ=60)
AATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACA > SRR4302533.4882541/1‑94 (MQ=60)
TGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGC > SRR4302533.1212787/1‑94 (MQ=60)
GACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTATGCCGTCTTCTGCTTGGAGAAAGAGATGTATAGAACTCATCGACAACACAGCC > SRR4302533.2631110/1‑94 (MQ=60)
GACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTATGCCGTCTTCGGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCC < SRR4302533.1612372/94‑1 (MQ=60)
ACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCT > SRR4302533.3858379/1‑94 (MQ=60)
CTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTG > SRR4302533.4812990/1‑94 (MQ=60)
AACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGT < SRR4302533.977397/94‑1 (MQ=60)
GGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAA > SRR4302533.4175949/1‑94 (MQ=60)
GGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAG < SRR4302533.2987137/94‑1 (MQ=60)
GCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCT < SRR4302533.3927507/94‑1 (MQ=60)
CGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCTGCTAGGAGGGCGAGATGTATAGAACTCATAGACAACACAGCCTGTTAAGCTT > SRR4302533.4264287/1‑94 (MQ=60)
CGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTC > SRR4302533.1583202/1‑94 (MQ=60)
GGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCTGCTTGGAGGGCGAAATGCATAGAACTCATCGACAACACAGCCTGTTAAGCTCG > SRR4302533.5291666/1‑94 (MQ=60)
GGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTGT > SRR4302533.2495717/1‑94 (MQ=60)
GGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCT > SRR4302533.2460200/1‑94 (MQ=60)
GGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCT > SRR4302533.2122899/1‑94 (MQ=60)
GAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTG < SRR4302533.4560878/94‑1 (MQ=60)
AAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCTGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGG > SRR4302533.1108052/1‑94 (MQ=60)
AAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGG > SRR4302533.3525533/1‑94 (MQ=60)
AAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGG > SRR4302533.5564080/1‑94 (MQ=60)
ACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTG < SRR4302533.5300339/94‑1 (MQ=60)
CCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGA < SRR4302533.2315181/94‑1 (MQ=60)
CCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAG > SRR4302533.5044478/1‑94 (MQ=60)
CCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAG > SRR4302533.1537825/1‑94 (MQ=60)
CGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTGAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGT > SRR4302533.4356351/1‑94 (MQ=60)
CGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGT > SRR4302533.3169385/1‑94 (MQ=60)
GCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTG < SRR4302533.3587553/94‑1 (MQ=60)
GCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTG < SRR4302533.2085754/94‑1 (MQ=60)
CAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGC < SRR4302533.5018096/94‑1 (MQ=60)
CAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGC > SRR4302533.1290501/1‑94 (MQ=60)
ACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCA > SRR4302533.793446/1‑94 (MQ=60)
TAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCG < SRR4302533.3202010/94‑1 (MQ=60)
CAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCG > SRR4302533.5002594/1‑94 (MQ=60)
AACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGT > SRR4302533.753958/1‑94 (MQ=60)
CTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTT > SRR4302533.271788/1‑94 (MQ=60)
TGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTA < SRR4302533.5856782/94‑1 (MQ=60)
GTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTAT > SRR4302533.1372128/1‑94 (MQ=60)
AAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTG > SRR4302533.5060387/1‑94 (MQ=60)
AATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGAGCCATCGTTTATTGG > SRR4302533.2370114/1‑94 (MQ=60)
CGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGG > SRR4302533.871456/1‑94 (MQ=60)
GTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGG > SRR4302533.5218927/1‑94 (MQ=60)
GTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGG < SRR4302533.4708938/94‑1 (MQ=60)
GTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGG < SRR4302533.5341765/94‑1 (MQ=60)
GTAAGCCGTCTTCAGCTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGG > SRR4302533.846021/1‑94 (MQ=60)
AAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCT > SRR4302533.6222968/1‑94 (MQ=60)
GCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGG > SRR4302533.4807711/1‑94 (MQ=60)
CCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGT < SRR4302533.5719783/94‑1 (MQ=60)
GTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGG > SRR4302533.4442130/1‑94 (MQ=60)
TCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGT > SRR4302533.2708309/1‑94 (MQ=60)
TCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGT < SRR4302533.592415/94‑1 (MQ=60)
CTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTG > SRR4302533.4240839/1‑94 (MQ=60)
TTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGT > SRR4302533.2261874/1‑94 (MQ=60)
TTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAAAACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGT > SRR4302533.5295714/1‑94 (MQ=60)
TCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTT < SRR4302533.5182773/94‑1 (MQ=60)
CAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTT > SRR4302533.6305113/1‑94 (MQ=60)
CAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTT > SRR4302533.5682941/1‑94 (MQ=60)
AGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTG > SRR4302533.2711488/1‑94 (MQ=60)
GTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGT > SRR4302533.2801271/1‑94 (MQ=60)
GTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGT < SRR4302533.2141834/94‑1 (MQ=60)
AGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCGGC > SRR4302533.3039605/1‑94 (MQ=60)
AGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCGGC > SRR4302533.5713566/1‑94 (MQ=60)
GGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCGGCA < SRR4302533.2613776/94‑1 (MQ=60)
GGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCGGCA < SRR4302533.1466484/94‑1 (MQ=60)
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AAAAATAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGAGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCGGCA > NC_000913/998340‑998525
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
