Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,003,385 |
Δ1 bp |
coding (186/681 nt) |
ycbF → |
putative chaperone |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,003,384 | 0 | A | . | 93.6%
| 674.3
/ 30.7
| 172 | coding (185/681 nt) | ycbF | putative chaperone |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base . (123/38); minor base G (2/9); total (125/47) |
| Fisher's exact test for biased strand distribution p-value = 1.59e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.62e-01 |
Only 100 of 193 total aligned reads displayed.
AGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGA > NC_000913/1003292‑1003472
|
agaATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGa < 1:6147058/93‑1 (MQ=255)
tCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGagcgt > 1:6304795/1‑89 (MQ=255)
tCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGagcgc > 1:3446006/1‑89 (MQ=255)
tgATATTTTTTTTACTGACTAATCCCAGTCAGGAATCCTGTTTTATTAACAGAAAAATCACCCCCCCAACGCGTTGGGCCGGGGGGG‑AGCGTc < 2:1620939/92‑1 (MQ=255)
gATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCg > 2:2740968/1‑93 (MQ=255)
gATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCg > 1:2930698/1‑93 (MQ=255)
gATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCg > 1:2246444/1‑93 (MQ=255)
tatCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGAc > 1:6095747/1‑93 (MQ=255)
atCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACa > 1:4263525/1‑93 (MQ=255)
atCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACa > 2:2127465/1‑93 (MQ=255)
tCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAg > 2:3393088/1‑93 (MQ=255)
tCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAg > 1:5530334/1‑93 (MQ=255)
cTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAgg > 2:1766248/1‑92 (MQ=255)
cTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGt > 1:176111/1‑93 (MQ=255)
tATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTg > 1:6244955/1‑93 (MQ=255)
ttttACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGcc > 1:2458108/1‑93 (MQ=255)
ttACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑GGCGTCGACAGTGCCAg > 2:2843356/1‑93 (MQ=255)
tGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCAcc > 1:4576644/1‑93 (MQ=255)
tGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCAcc > 2:1041411/1‑93 (MQ=255)
aCTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCAt > 1:4895586/1‑93 (MQ=255)
aaaaCCAGTCAGAAATCCTGGCTTATAAACAGAAAAATCACCCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTAc < 1:4724657/90‑1 (MQ=255)
aaTACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTAc > 1:272171/1‑93 (MQ=255)
aaTACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTAc < 1:2079029/93‑1 (MQ=255)
tACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTg > 1:1080774/1‑93 (MQ=255)
aCCAGTCAGAAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTgg < 1:4013098/93‑1 (MQ=255)
ccAGTCAGGAATCCTGTCTTATTAACAGTAAAATCAACCGCCCACCGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGc < 2:767842/93‑1 (MQ=255)
ccAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGc > 2:5353135/1‑93 (MQ=255)
cAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGcc > 1:792584/1‑93 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGc > 1:5022397/1‑93 (MQ=255)
gAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGc > 2:1159432/1‑93 (MQ=255)
gAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGc > 2:5476332/1‑93 (MQ=255)
aaTCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGcc > 1:327269/1‑93 (MQ=255)
tCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCAc > 1:5230508/1‑93 (MQ=255)
tCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCAc > 2:4298493/1‑93 (MQ=255)
ccTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACt > 1:3665415/1‑93 (MQ=255)
ccTGGCTTATTAACAGGAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACt > 2:3185681/1‑93 (MQ=255)
cTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACtt > 1:5701055/1‑93 (MQ=255)
cTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACtt < 1:2122585/93‑1 (MQ=255)
ggCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTAt > 2:6207380/1‑93 (MQ=255)
ggCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTAt > 1:590060/1‑93 (MQ=255)
tttattaACAGAAAAATCAACCGCCCATCGCGTTGGCCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATtc < 2:2711383/92‑1 (MQ=255)
cgtattaACATAAAAATCACCCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATtc < 2:3956193/91‑1 (MQ=255)
cTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATtc < 1:4030254/93‑1 (MQ=255)
tattaACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATtctc > 2:1606522/1‑93 (MQ=255)
tattaACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATtctc > 1:3902918/1‑93 (MQ=255)
tattaACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATtctc > 1:2975446/1‑93 (MQ=255)
ttaACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCt > 2:2627309/1‑93 (MQ=255)
taACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTg > 1:378865/1‑93 (MQ=255)
aaCAGTAAAATCAACCGCCCAACGCGATGGGCCGGGGGGG‑AGTGTCGAAAGGGCCAGCACCAGTACTGGCCGCACCGCCCCTTATTCTCCTGa > 2:2228108/1‑93 (MQ=255)
aCAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGaa < 1:5267187/93‑1 (MQ=255)
cAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAg > 2:877104/1‑93 (MQ=255)
aGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑TGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTGTTCTCCTGAAGc > 2:3105011/1‑93 (MQ=255)
aGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGc > 1:5742083/1‑93 (MQ=255)
gTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGcc > 2:1929862/1‑93 (MQ=255)
gTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGcc > 2:1152307/1‑93 (MQ=255)
tAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGccc < 1:3071003/93‑1 (MQ=255)
aaagTCAACCGGCCAGCGCTTTTGGCC‑GGGGGGAAGCGTCGACAGTTCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCg < 2:6131425/93‑1 (MQ=255)
aaaaTCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCg > 2:4082825/1‑93 (MQ=255)
aTCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTa > 1:233486/1‑93 (MQ=255)
aTCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTa > 1:1124739/1‑93 (MQ=255)
tCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTAc > 2:717663/1‑93 (MQ=255)
tCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTAc > 2:949317/1‑93 (MQ=255)
cAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACg > 1:4515003/1‑93 (MQ=255)
acccGCCCACCGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGa < 1:2620960/91‑1 (MQ=255)
aaCCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACgc > 1:1617449/1‑92 (MQ=255)
aCCGCCCAACGCGTTGGGCCGGGGGGG‑TGCGTCGACAGTGTCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGAc > 2:3721477/1‑93 (MQ=255)
aCCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGAc > 1:1031377/1‑93 (MQ=255)
aCCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGAc > 1:4920417/1‑93 (MQ=255)
ccccccAACGGGTGGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACa < 1:4639931/90‑1 (MQ=255)
ccGCCCACGGTGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACa < 1:6000030/93‑1 (MQ=255)
ccGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACa > 2:5189371/1‑93 (MQ=255)
ccGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACa < 1:4196160/93‑1 (MQ=255)
cGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAg > 1:47099/1‑93 (MQ=255)
cGCCAAAGGCGTGGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAg < 2:626445/93‑1 (MQ=255)
gCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAgg > 2:4447395/1‑93 (MQ=255)
gCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTAATGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGAAAgg > 2:300255/1‑93 (MQ=255)
cccAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGc > 1:1478895/1‑93 (MQ=255)
cccAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGc > 1:407529/1‑93 (MQ=255)
cccAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCACCGCCACTTATTCTCCTGAAGCCCGGTGCGACAGGc > 2:5870135/1‑93 (MQ=255)
ccAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCa < 1:1055661/93‑1 (MQ=255)
ccAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCa > 2:5053515/1‑93 (MQ=255)
ccAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCa < 2:2001541/93‑1 (MQ=255)
ccAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCa > 2:226445/1‑93 (MQ=255)
cAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAc > 1:942494/1‑93 (MQ=255)
cAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAc > 1:71076/1‑93 (MQ=255)
cAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAc > 1:1178654/1‑93 (MQ=255)
cAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAc > 1:4047010/1‑93 (MQ=255)
cAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAc < 1:1934725/93‑1 (MQ=255)
aaCGCGTTGGGCCGGGGGGG‑GGCGTCGACAGTGCCAGCACCATTACTGGTCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACg > 2:5564612/1‑93 (MQ=255)
aaCGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACg > 2:2696411/1‑93 (MQ=255)
cgggTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGtt < 2:4863546/90‑1 (MQ=255)
cgcgTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGtt < 2:4253458/93‑1 (MQ=255)
gTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcg > 1:2109734/1‑93 (MQ=255)
ttGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcgc < 2:6078585/93‑1 (MQ=255)
gggcGGGGGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCTACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCtt < 1:3375802/90‑1 (MQ=255)
ggCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTg > 1:4402245/1‑93 (MQ=255)
gcGGGGGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGc < 1:2416841/92‑1 (MQ=255)
ggggggGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTga > 2:2491885/1‑93 (MQ=255)
ggggggGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTga < 2:4645506/93‑1 (MQ=255)
ggggggAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTgtg > 2:2602257/1‑91 (MQ=255)
|
AGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGA > NC_000913/1003292‑1003472
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAA > NC_000913/1003292‑1003478
|
AGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGAG < SRR4302533.6184065/94‑1 (MQ=60)
ATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGT > SRR4302533.6342510/1‑94 (MQ=60)
TCGATATCTATTTTACTGACAAATACCAGTCAGGAATCCTGGCTTATAAACAGTAAAATCACCCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTC < SRR4302533.4679345/94‑1 (MQ=60)
CGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCG > SRR4302533.2948622/1‑94 (MQ=60)
CGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCG > SRR4302533.2260327/1‑94 (MQ=60)
CGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCG > SRR4302533.6326569/1‑94 (MQ=60)
GATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGA > SRR4302533.3212398/1‑94 (MQ=60)
ATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGAC > SRR4302533.6132571/1‑94 (MQ=60)
TATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACA > SRR4302533.4289210/1‑94 (MQ=60)
ATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAG > SRR4302533.5563720/1‑94 (MQ=60)
TCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGT > SRR4302533.3693475/1‑94 (MQ=60)
TCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGT > SRR4302533.177218/1‑94 (MQ=60)
CTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTG > SRR4302533.4095647/1‑94 (MQ=60)
CTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTG > SRR4302533.2750959/1‑94 (MQ=60)
CTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTG > SRR4302533.6282335/1‑94 (MQ=60)
ATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCC > SRR4302533.699038/1‑94 (MQ=60)
ATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCC > SRR4302533.1265742/1‑94 (MQ=60)
ATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCC > SRR4302533.2473275/1‑94 (MQ=60)
TTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGC > SRR4302533.796862/1‑94 (MQ=60)
ACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACAGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGGAC > SRR4302533.6009156/1‑94 (MQ=60)
ctgaataatacgcgacagaaatcctgttttataAACAGAAAAACCAACCGCCCAACGCTTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACC < SRR4302533.560746/61‑1 (MQ=47)
CTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACC > SRR4302533.4604382/1‑94 (MQ=60)
TGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCA > SRR4302533.4588750/1‑94 (MQ=60)
TGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCA > SRR4302533.4477308/1‑94 (MQ=60)
GACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCAT > SRR4302533.4958619/1‑94 (MQ=60)
GACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCAT > SRR4302533.4925252/1‑94 (MQ=60)
ataaatccaagtcagaattcttggtttataaaaagaaaaaccacCCGCCCACCGGGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATT < SRR4302533.5608525/50‑1 (MQ=37)
ACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATT < SRR4302533.3989990/94‑1 (MQ=60)
acaaatgagaaaaatttgtgtaaaaaaaaaaaaaaaccccccgccccgggggggggGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTAC < SRR4302533.4315505/38‑1 (MQ=60)
TAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTAC > SRR4302533.273826/1‑94 (MQ=60)
AATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACT < SRR4302533.2091822/94‑1 (MQ=60)
AAAACCAGTCAGAAATCCTGGCTTATAAACAGAAAAATCACCCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACT < SRR4302533.4753304/94‑1 (MQ=60)
ATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTG > SRR4302533.2406402/1‑94 (MQ=60)
ATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTG > SRR4302533.1087150/1‑94 (MQ=60)
ACCAGTCAGAAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGC < SRR4302533.4037532/94‑1 (MQ=60)
CCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCC > SRR4302533.2156382/1‑94 (MQ=60)
CCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCC > SRR4302533.797248/1‑94 (MQ=60)
CAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGTGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCG < SRR4302533.4947089/94‑1 (MQ=60)
AGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGC > SRR4302533.5052812/1‑94 (MQ=60)
AGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGC > SRR4302533.5523245/1‑94 (MQ=60)
AGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGC > SRR4302533.911982/1‑94 (MQ=60)
GTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCC > SRR4302533.1706377/1‑94 (MQ=60)
GAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCC > SRR4302533.329259/1‑94 (MQ=60)
GAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCC > SRR4302533.1959930/1‑94 (MQ=60)
ATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCAC > SRR4302533.106512/1‑94 (MQ=60)
ATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCAC > SRR4302533.5261970/1‑94 (MQ=60)
TCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACT > SRR4302533.3687948/1‑94 (MQ=60)
CCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTT > SRR4302533.2128741/1‑94 (MQ=60)
CCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTT > SRR4302533.5735481/1‑94 (MQ=60)
CTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTA > SRR4302533.1169915/1‑94 (MQ=60)
CTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTA > SRR4302533.344019/1‑94 (MQ=60)
CTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTA < SRR4302533.2135667/94‑1 (MQ=60)
TGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTAT > SRR4302533.593545/1‑94 (MQ=60)
TGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTAT > SRR4302533.5767448/1‑94 (MQ=60)
tttataaacacaaaaaccacccgccaagcggtTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCT < SRR4302533.4745348/62‑1 (MQ=60)
CTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCT < SRR4302533.4054785/94‑1 (MQ=60)
TTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTC > SRR4302533.4695773/1‑94 (MQ=60)
TTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTC > SRR4302533.3926755/1‑94 (MQ=60)
TTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTC > SRR4302533.2993652/1‑94 (MQ=60)
TTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTC > SRR4302533.3475947/1‑94 (MQ=60)
ATTAACAAAAAAAACAACCCCCCAACGCGTGGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCT < SRR4302533.2535219/94‑1 (MQ=60)
TTAACAGTAAAATCACCCGCCCAACGGGTGGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTG < SRR4302533.4301607/94‑1 (MQ=60)
TTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTG > SRR4302533.381148/1‑94 (MQ=60)
aaaaaaaaaaccccccccccgcggggggGGGCCCGGGGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGA < SRR4302533.2200134/66‑1 (MQ=60)
AACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAA > SRR4302533.6084648/1‑94 (MQ=60)
ACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAG < SRR4302533.5298790/94‑1 (MQ=60)
ACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAG > SRR4302533.4894310/1‑94 (MQ=60)
ACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACCTATTCTCCTGAAC > SRR4302533.6258663/1‑94 (MQ=60)
acaaaaaaaccacccccccaccgggTGGGCCCGGGGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAG < SRR4302533.261489/69‑1 (MQ=60)
aaaaaaccacccgcccccgcgttgtggcGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGC < SRR4302533.3334035/66‑1 (MQ=60)
CAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGC > SRR4302533.5776733/1‑94 (MQ=60)
TAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCG < SRR4302533.3089857/94‑1 (MQ=60)
AATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTA > SRR4302533.1131414/1‑94 (MQ=60)
AATCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTA > SRR4302533.234928/1‑94 (MQ=60)
cacacccccacggctgggGGGCCCGGGGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTAC < SRR4302533.4475274/76‑1 (MQ=60)
TCAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACG > SRR4302533.4542342/1‑94 (MQ=60)
CAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGC > SRR4302533.1627249/1‑94 (MQ=60)
CAACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGA > SRR4302533.4217579/1‑94 (MQ=60)
ACCCGCCCACCGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGAC < SRR4302533.2637046/94‑1 (MQ=60)
AACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGAC > SRR4302533.4950223/1‑94 (MQ=60)
AACCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGAC > SRR4302533.1037442/1‑94 (MQ=60)
cccccaagggtgtgGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAG < SRR4302533.4501058/80‑1 (MQ=60)
CCGCCCACGGTGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAG < SRR4302533.6036375/94‑1 (MQ=60)
CCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAG > SRR4302533.47425/1‑94 (MQ=60)
CCGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAG < SRR4302533.4221563/94‑1 (MQ=60)
CCCCCCAACGGGTGGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAG < SRR4302533.4668044/94‑1 (MQ=60)
CGCCCAACGCGTTGGGCCGGGGGGG‑GGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTNTCCTGAAGCCCCGTANGNCNGG > SRR4302533.5391368/1‑94 (MQ=60)
CGCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGG < SRR4302533.4037979/94‑1 (MQ=60)
GCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGC > SRR4302533.409978/1‑94 (MQ=60)
GCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGC > SRR4302533.5905623/1‑94 (MQ=60)
GCCCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGC > SRR4302533.1487829/1‑94 (MQ=60)
ccggtggtgtggggCGGGGGGGGAGCGTCGACAGTGCCAGCGCCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCA < SRR4302533.1412900/80‑1 (MQ=60)
CCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAC > SRR4302533.71534/1‑94 (MQ=60)
CCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAC > SRR4302533.948039/1‑94 (MQ=60)
CCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAC < SRR4302533.1061869/94‑1 (MQ=60)
CCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAC > SRR4302533.1185732/1‑94 (MQ=60)
CCAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAC > SRR4302533.4071649/1‑94 (MQ=60)
ccgcgggtgGGGCCCGGGGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAC < SRR4302533.4418988/85‑1 (MQ=60)
CAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACG < SRR4302533.1946528/94‑1 (MQ=60)
CAACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACG < SRR4302533.4288024/94‑1 (MQ=60)
AACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGT > SRR4302533.2957920/1‑94 (MQ=60)
AACGCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGT > SRR4302533.5260697/1‑94 (MQ=60)
ggggcggtcgagtGGGGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGT < SRR4302533.4316415/81‑1 (MQ=60)
GCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGC > SRR4302533.3346562/1‑94 (MQ=60)
GCGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGC > SRR4302533.5681377/1‑94 (MQ=60)
CGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCG > SRR4302533.2122749/1‑94 (MQ=60)
CGTTGGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCG > SRR4302533.1536196/1‑94 (MQ=60)
GGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTG < SRR4302533.3852049/94‑1 (MQ=60)
GGGCCGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTG > SRR4302533.4428825/1‑94 (MQ=60)
GGGCCCGGGGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTT < SRR4302533.1104433/94‑1 (MQ=60)
GGGCGGGGGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCTACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTG < SRR4302533.3396648/94‑1 (MQ=60)
GCGGGGGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCT < SRR4302533.2431767/94‑1 (MQ=60)
CGGGGGGG‑AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGA < SRR4302533.1782740/94‑1 (MQ=60)
GGGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGA < SRR4302533.617390/94‑1 (MQ=60)
GGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAA < SRR4302533.2713840/94‑1 (MQ=60)
GGGGGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAA < SRR4302533.4646899/94‑1 (MQ=60)
GGAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGG < SRR4302533.3543763/94‑1 (MQ=60)
GAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGA < SRR4302533.2138082/94‑1 (MQ=60)
AGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAA < SRR4302533.3877890/94‑1 (MQ=60)
|
AGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAA > NC_000913/1003292‑1003478
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
