Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,040,218 |
G→A |
A127T (GCA→ACA) |
appA → |
phosphoanhydride phosphorylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,040,218 | 0 | G | A | 100.0%
| 762.0
/ NA
| 208 | A127T (GCA→ACA) | appA | phosphoanhydride phosphorylase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (111/97); total (111/97) |
Only 100 of 220 total aligned reads displayed.
AGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGGCACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAA > NC_000913/1040129‑1040307
|
aGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGacac > 2:39638/1‑93 (MQ=255)
aGGCCTCCCCGAAGTCTGGTCAGGTCGCATTTATTGCTGATGTCGACGAGCGTCCCCGAAAAACAGGCGAAGCCTTCGCCGCCGGGCTGacac < 2:3786740/93‑1 (MQ=255)
gggCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTCCCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACAcc < 2:5475706/93‑1 (MQ=255)
gggCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACAcc > 2:2258386/1‑93 (MQ=255)
gCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACt > 2:300504/1‑93 (MQ=255)
cccGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACtg < 1:4660013/93‑1 (MQ=255)
ccGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACtgt < 1:2124297/93‑1 (MQ=255)
ccGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACtgt > 2:5362370/1‑93 (MQ=255)
ccGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTAACCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACtgt > 2:372574/1‑93 (MQ=255)
cGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACtgtg > 1:5984692/1‑93 (MQ=255)
gCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGc > 2:2027984/1‑93 (MQ=255)
gCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGACTTCGCCGCCGGGCTGACACCTGACTGTGc > 1:3786975/1‑93 (MQ=255)
cAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCa > 1:4507430/1‑93 (MQ=255)
cAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCa > 2:2601467/1‑93 (MQ=255)
gTCTGGTCAGTTCGCGATTATTGCTGATGTCGACGAGCGTCCCCGAAAAATAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAAt < 1:4434334/93‑1 (MQ=255)
gTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAAt > 1:2361877/1‑93 (MQ=255)
gTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAAt > 2:1123114/1‑93 (MQ=255)
gTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAAt < 2:4853955/93‑1 (MQ=255)
gTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAAt > 1:498194/1‑93 (MQ=255)
cgggTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATaa < 2:4403573/91‑1 (MQ=255)
tGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAc < 1:1046449/93‑1 (MQ=255)
tGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAc < 1:1541025/93‑1 (MQ=255)
ggTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAcc > 2:813194/1‑93 (MQ=255)
gTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCg > 2:5251494/1‑93 (MQ=255)
tCAGGTCTCGATTATTTCTGATGTCGACGAGCGTACCCTTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGt < 2:199122/93‑1 (MQ=255)
aGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTAc > 2:4249428/1‑93 (MQ=255)
ggTCGCGATTATTGCTGAGGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACa < 1:555185/93‑1 (MQ=255)
gacgcgATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAt > 2:3115371/3‑93 (MQ=255)
gTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAACCAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAt < 1:2425547/93‑1 (MQ=255)
gTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAt > 1:4039534/1‑93 (MQ=255)
tCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATa > 1:3821433/1‑93 (MQ=255)
cgcgATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATAc > 1:5388147/1‑93 (MQ=255)
gcgATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATAcc > 2:2139011/1‑93 (MQ=255)
gcgATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATAcc > 1:1608844/1‑93 (MQ=255)
gcgATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAAGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATAcc > 2:89104/1‑93 (MQ=255)
gATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCa < 2:1533855/93‑1 (MQ=255)
attattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAg > 1:4872159/1‑93 (MQ=255)
attattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAg > 2:2699983/1‑93 (MQ=255)
attattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAg < 1:3424317/93‑1 (MQ=255)
tGCTGATGTCGACGAGCGTCCCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGa < 1:5477806/93‑1 (MQ=255)
tGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGa < 2:1503976/93‑1 (MQ=255)
tGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGa < 2:5618394/93‑1 (MQ=255)
cTGATGTCGACGAGCTTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATa < 2:3205609/93‑1 (MQ=255)
cTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATa < 2:5594386/93‑1 (MQ=255)
gATGTCGAGGAGCGTACCCGTAAAGCAGGCGAAGCCTTCGCCGCGGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGACAGATACg < 2:6118537/93‑1 (MQ=255)
gTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTcc < 2:689393/93‑1 (MQ=255)
tCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCa < 1:5167608/93‑1 (MQ=255)
acgaGCGTCCCCGAAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTc < 2:286488/93‑1 (MQ=255)
acgaGCGTATCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTc < 2:3902104/93‑1 (MQ=255)
acgaGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTc > 2:2435692/1‑93 (MQ=255)
cgaGCGTACCGGAAAAACGGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTcc < 2:3424082/93‑1 (MQ=255)
cgaGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTcc > 1:6076488/1‑93 (MQ=255)
cgaGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTcc < 2:1737037/93‑1 (MQ=255)
cgaGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTACAGTcc > 2:1398371/1‑93 (MQ=255)
aGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCg > 1:4322562/1‑93 (MQ=255)
aGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCg > 1:4780528/1‑93 (MQ=255)
aGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCg < 2:2540663/93‑1 (MQ=255)
gCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGa < 1:6246641/93‑1 (MQ=255)
gCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGa > 1:2744483/1‑93 (MQ=255)
gTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATc > 1:4298428/1‑93 (MQ=255)
tccccGAAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATcc < 1:64230/91‑1 (MQ=255)
aCCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCg > 2:843429/1‑93 (MQ=255)
aCCCGAAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCg < 1:5335258/93‑1 (MQ=255)
cccGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGt > 1:2713237/1‑93 (MQ=255)
cccGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGt < 2:5737154/93‑1 (MQ=255)
ccGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGtt < 2:4658515/93‑1 (MQ=255)
cagTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGtt < 1:6118068/91‑1 (MQ=255)
cGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTa < 2:1087907/93‑1 (MQ=255)
gTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAGTAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTAt > 2:2083784/1‑93 (MQ=255)
gTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTAt > 2:1667824/1‑93 (MQ=255)
tAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTAtt > 2:4354699/1‑93 (MQ=255)
tAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTAtt < 1:3613584/93‑1 (MQ=255)
aaaaCAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTAttt < 2:4896952/93‑1 (MQ=255)
aaaaCAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTAttt < 2:1825503/93‑1 (MQ=255)
cAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATc > 1:5054064/1‑93 (MQ=255)
ggCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCct > 1:2967705/1‑93 (MQ=255)
ggCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCct > 1:1452589/1‑93 (MQ=255)
ggCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCct > 1:773515/1‑93 (MQ=255)
gAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTa > 1:950612/1‑93 (MQ=255)
aGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTaaa < 1:1236794/93‑1 (MQ=255)
gCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTaaaa > 1:2384973/1‑93 (MQ=255)
gCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTaaaa > 1:1951165/1‑93 (MQ=255)
ccTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTaaaaa > 1:5364778/1‑93 (MQ=255)
ttCGCCGCCGGGCTGACACCTGACTGTGTAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACt > 1:3898848/1‑93 (MQ=255)
ttCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACt > 1:3014509/1‑93 (MQ=255)
ttCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACt > 1:1366947/1‑93 (MQ=255)
tCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTg < 1:2836970/93‑1 (MQ=255)
tCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTg < 2:2831564/93‑1 (MQ=255)
tCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTg > 1:2308789/1‑93 (MQ=255)
cgccgcCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTgg < 2:4588343/93‑1 (MQ=255)
gccgccGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGc > 2:5947280/1‑93 (MQ=255)
ccgccgGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCg > 1:1097025/1‑93 (MQ=255)
cgccgGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGt > 2:406605/1‑93 (MQ=255)
gccgGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGtt < 2:158312/93‑1 (MQ=255)
ccgGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGttt < 2:3250882/93‑1 (MQ=255)
ccgGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGttt > 1:5920029/1‑93 (MQ=255)
cgGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTg < 2:1695059/93‑1 (MQ=255)
gggCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGc > 2:2217049/1‑93 (MQ=255)
ggCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGcc > 1:2214773/1‑93 (MQ=255)
gCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCa > 2:5220644/1‑93 (MQ=255)
|
AGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGGCACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAA > NC_000913/1040129‑1040307
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAAAGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGGCACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAACT > NC_000913/1040125‑1040309
|
AAAAAGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGA > SRR4302533.265699/1‑94 (MQ=60)
AAAAGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGAC < SRR4302533.3231033/94‑1 (MQ=60)
AAGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACAC > SRR4302533.3264665/1‑94 (MQ=60)
GGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTG < SRR4302533.4881630/94‑1 (MQ=60)
CTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGAC > SRR4302533.5142238/1‑94 (MQ=60)
TGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACT > SRR4302533.5327594/1‑94 (MQ=60)
TGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACT > SRR4302533.815560/1‑94 (MQ=60)
TGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACT < SRR4302533.2086993/94‑1 (MQ=60)
TGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACT > SRR4302533.1602250/1‑94 (MQ=60)
CCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGT < SRR4302533.4688254/94‑1 (MQ=60)
CCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTG > SRR4302533.6020938/1‑94 (MQ=60)
CCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTG < SRR4302533.2137391/94‑1 (MQ=60)
CGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCTGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGC < SRR4302533.4110947/94‑1 (MQ=60)
CGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGACTTCGCCGCCGGGCTGACACCTGACTGTGC > SRR4302533.3810163/1‑94 (MQ=60)
GCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCA > SRR4302533.4534729/1‑94 (MQ=60)
GCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCA > SRR4302533.2278638/1‑94 (MQ=60)
AGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAAT > SRR4302533.501161/1‑94 (MQ=60)
AGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAAT > SRR4302533.3026195/1‑94 (MQ=60)
AGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAAT > SRR4302533.2376494/1‑94 (MQ=60)
GTCTGGTCAGTTCGCGATTATTGCTGATGTCGACGAGCGTCCCCGAAAAATAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATA < SRR4302533.4461142/94‑1 (MQ=60)
GTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATA < SRR4302533.739212/94‑1 (MQ=60)
CTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAC > SRR4302533.4689261/1‑94 (MQ=60)
TGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACC < SRR4302533.1052597/94‑1 (MQ=60)
TGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACC < SRR4302533.1550306/94‑1 (MQ=60)
CAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTAC < SRR4302533.5724286/94‑1 (MQ=60)
GGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAT > SRR4302533.3559526/1‑94 (MQ=60)
GGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAT > SRR4302533.4064114/1‑94 (MQ=60)
GGTCGCGATTATTGCTGAGGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAT < SRR4302533.558476/94‑1 (MQ=60)
GTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAACCAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATA < SRR4302533.2440520/94‑1 (MQ=60)
GTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATA > SRR4302533.3844800/1‑94 (MQ=60)
GTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATA > SRR4302533.2429827/1‑94 (MQ=60)
TCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATAC > SRR4302533.5420524/1‑94 (MQ=60)
TCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATAC < SRR4302533.6263131/94‑1 (MQ=60)
CGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACC > SRR4302533.1618603/1‑94 (MQ=60)
CGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACC < SRR4302533.2752678/94‑1 (MQ=60)
cggattatttcagatatcgaggatcgtccccgaaaacaAGGCGAAGCCATCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCC < SRR4302533.15183/56‑1 (MQ=60)
GCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCC < SRR4302533.5412394/94‑1 (MQ=60)
GATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAG > SRR4302533.4901682/1‑94 (MQ=60)
ATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGG > SRR4302533.2736940/1‑94 (MQ=60)
ATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGG > SRR4302533.5048418/1‑94 (MQ=60)
ATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGG < SRR4302533.3445472/94‑1 (MQ=60)
TTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGC > SRR4302533.4677721/1‑94 (MQ=60)
TGCTGATGTCGACGAGCGTCCCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGAT < SRR4302533.5510824/94‑1 (MQ=60)
CTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATAC < SRR4302533.3849664/94‑1 (MQ=60)
GATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGT > SRR4302533.2842077/1‑94 (MQ=60)
GATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGT < SRR4302533.5212357/94‑1 (MQ=60)
ATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTC > SRR4302533.4993810/1‑94 (MQ=60)
GTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCA < SRR4302533.2174843/94‑1 (MQ=60)
TCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAG < SRR4302533.5198804/94‑1 (MQ=60)
TCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAG < SRR4302533.5695481/94‑1 (MQ=60)
CGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGT < SRR4302533.5990178/94‑1 (MQ=60)
GACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTC < SRR4302533.4489253/94‑1 (MQ=60)
ACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCC > SRR4302533.6113239/1‑94 (MQ=60)
GAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCG > SRR4302533.4809490/1‑94 (MQ=60)
GAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCG > SRR4302533.4348592/1‑94 (MQ=60)
AGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGA > SRR4302533.2761306/1‑94 (MQ=60)
AGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGA > SRR4302533.5451353/1‑94 (MQ=60)
GCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGAT < SRR4302533.6284025/94‑1 (MQ=60)
CGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATC > SRR4302533.4324279/1‑94 (MQ=60)
CGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATC > SRR4302533.6115317/1‑94 (MQ=60)
TCCCCGAAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCG < SRR4302533.64647/94‑1 (MQ=60)
TACCGGAAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCG < SRR4302533.5382274/94‑1 (MQ=60)
ACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGT > SRR4302533.2729899/1‑94 (MQ=60)
ACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGT > SRR4302533.2588962/1‑94 (MQ=60)
ACCCGAAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGT < SRR4302533.5367237/94‑1 (MQ=60)
CAGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTA < SRR4302533.6154968/94‑1 (MQ=60)
CGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTAT > SRR4302533.1385636/1‑94 (MQ=60)
GTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATT < SRR4302533.3815621/94‑1 (MQ=60)
GAAAAACAGGGGACGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATT < SRR4302533.4347345/94‑1 (MQ=60)
TAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTT < SRR4302533.3635820/94‑1 (MQ=60)
AACAGGCGAGGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAAT < SRR4302533.1251691/94‑1 (MQ=60)
ACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATC > SRR4302533.5084620/1‑94 (MQ=60)
CAGGCGAAGCCTTCGCCGCCTGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCC > SRR4302533.4274222/1‑94 (MQ=60)
CAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCC < SRR4302533.3675472/94‑1 (MQ=60)
gggcgagcCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCT < SRR4302533.4370587/86‑1 (MQ=60)
AGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCT > SRR4302533.1461353/1‑94 (MQ=60)
AGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCT > SRR4302533.778063/1‑94 (MQ=60)
AGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCT > SRR4302533.2985847/1‑94 (MQ=60)
GGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTC > SRR4302533.5540788/1‑94 (MQ=60)
GCGAAGCCCTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCT < SRR4302533.984483/94‑1 (MQ=60)
CGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTA > SRR4302533.956194/1‑94 (MQ=60)
AGGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAA < SRR4302533.2264903/94‑1 (MQ=60)
AAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAA < SRR4302533.6338588/94‑1 (MQ=60)
AGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAA < SRR4302533.1244185/94‑1 (MQ=60)
AGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAA > SRR4302533.1963055/1‑94 (MQ=60)
AGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAA > SRR4302533.2399712/1‑94 (MQ=60)
AGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAA > SRR4302533.2334906/1‑94 (MQ=60)
GCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAA > SRR4302533.5397005/1‑94 (MQ=60)
CTTCGCCGCCGGGCTGACACCTGACTGTGTAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACT > SRR4302533.3922636/1‑94 (MQ=60)
CTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACT > SRR4302533.1375164/1‑94 (MQ=60)
CTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACT > SRR4302533.3032945/1‑94 (MQ=60)
TTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTG < SRR4302533.4775821/94‑1 (MQ=60)
TTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTG > SRR4302533.2323092/1‑94 (MQ=60)
TGCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTG < SRR4302533.1535075/94‑1 (MQ=60)
TCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGG < SRR4302533.2854431/94‑1 (MQ=60)
TCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGG < SRR4302533.2854432/94‑1 (MQ=60)
CGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGC < SRR4302533.6046995/94‑1 (MQ=60)
GCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCG > SRR4302533.2389883/1‑94 (MQ=60)
GCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCG > SRR4302533.1103522/1‑94 (MQ=60)
GCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTT > SRR4302533.5955812/1‑94 (MQ=60)
GCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTT > SRR4302533.1860169/1‑94 (MQ=60)
CCGGGCTGACACCTGACTGTGCAATACCCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTG < SRR4302533.39902/94‑1 (MQ=60)
CCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTG > SRR4302533.3583031/1‑94 (MQ=60)
GGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCC > SRR4302533.2228440/1‑94 (MQ=60)
GCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAA < SRR4302533.1178307/94‑1 (MQ=60)
GCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAA > SRR4302533.1084145/1‑94 (MQ=60)
CTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAAC > SRR4302533.5389369/1‑94 (MQ=60)
TGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAACT > SRR4302533.5118191/1‑94 (MQ=60)
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AAAAAGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGGCACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAACT > NC_000913/1040125‑1040309
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
