Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,048,676	A→G	S104P (TCC→CCC)	ymcD ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,048,676	0	A	G	99.6%	877.9 / ‑5.0	277	S104P (TCC→CCC)	ymcD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (125/150); total (125/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01

Only 100 of 283 total aligned reads displayed.

AATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCC  >  NC_000913/1048584‑1048764

aaTGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGa                                                                                          >  1:6443992/1‑93 (MQ=255)

    cAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtg                                                                                      <  1:68702/93‑1 (MQ=255)

    cAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtg                                                                                      <  2:2240309/93‑1 (MQ=255)

    cAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtg                                                                                      <  1:2410538/93‑1 (MQ=255)

     aaaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtgg                                                                                     >  2:6656304/1‑93 (MQ=255)

     aaaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtgg                                                                                     <  2:10029272/93‑1 (MQ=255)

     aaaTCTCGAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtgg                                                                                     <  1:8689342/93‑1 (MQ=255)

      aaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggt                                                                                    <  2:8599609/93‑1 (MQ=255)

      aaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggt                                                                                    >  2:6325031/1‑93 (MQ=255)

      aaTCTCTAAAGCCCGGTACGAATATCGCAACCAGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggt                                                                                    >  1:8111649/1‑93 (MQ=255)

      aaTCTCTAAAGCCCGGTACGAATATCGCAACCAGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggt                                                                                    <  2:1181128/93‑1 (MQ=255)

       aTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggtg                                                                                   <  1:9468472/93‑1 (MQ=255)

        tctcTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGtggtgg                                                                                  >  2:2681427/1‑93 (MQ=255)

         ctctAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTggtggt                                                                                 <  2:506976/93‑1 (MQ=255)

           ctAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTg                                                                               >  2:9160263/1‑93 (MQ=255)

            tAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTgg                                                                              >  1:3514271/1‑92 (MQ=255)

            tAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGa                                                                              <  2:188106/93‑1 (MQ=255)

            tAAAGCCCGGTACGAATATCGCAACCGGGCATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGCTGGTTGa                                                                              >  2:227146/1‑93 (MQ=255)

            tAAAGCCCAGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGa                                                                              <  1:903897/93‑1 (MQ=255)

             aaaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAg                                                                             >  2:5183695/1‑93 (MQ=255)

              aaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAgg                                                                            <  1:4180575/93‑1 (MQ=255)

              aaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAgg                                                                            >  1:4664336/1‑93 (MQ=255)

              aaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAgg                                                                            <  2:4933968/93‑1 (MQ=255)

               aGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGgt                                                                           <  1:3787366/93‑1 (MQ=255)

               aGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGgt                                                                           >  1:8742484/1‑93 (MQ=255)

                gCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGgtg                                                                          >  1:5958082/1‑93 (MQ=255)

                   cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                       <  1:6823161/93‑1 (MQ=255)

                   cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                       >  2:6381578/1‑93 (MQ=255)

                   cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                       <  2:6848330/93‑1 (MQ=255)

                   cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                       <  1:7964056/93‑1 (MQ=255)

                   cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                       <  1:3082299/93‑1 (MQ=255)

                   cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                       >  1:224521/1‑93 (MQ=255)

                    ggTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAt                                                                      <  1:6230898/93‑1 (MQ=255)

                    ggTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAt                                                                      >  1:5115320/1‑93 (MQ=255)

                    ggTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAt                                                                      >  1:6961428/1‑93 (MQ=255)

                      tACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATga                                                                    <  2:88034/93‑1 (MQ=255)

                        cGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATgaga                                                                  >  1:4494601/1‑93 (MQ=255)

                        cGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATgaga                                                                  <  2:7526635/93‑1 (MQ=255)

                          aaTATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAAc                                                                <  1:9660577/93‑1 (MQ=255)

                             atCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGc                                                             >  2:3974733/1‑93 (MQ=255)

                               cGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCa                                                           <  1:1670196/93‑1 (MQ=255)

                                gCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAt                                                          <  1:7728739/93‑1 (MQ=255)

                                gCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAt                                                          <  2:5561773/93‑1 (MQ=255)

                                gCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAt                                                          <  2:1515558/93‑1 (MQ=255)

                                gCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAt                                                          <  1:4054301/93‑1 (MQ=255)

                                gCAACCGGGGATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAt                                                          >  2:2837817/1‑93 (MQ=255)

                                 cAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATc                                                         <  2:3603007/93‑1 (MQ=255)

                                 cAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATc                                                         <  1:1937932/93‑1 (MQ=255)

                                   aCCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGc                                                       >  1:5047207/1‑93 (MQ=255)

                                    ccGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGcc                                                      <  2:6447515/93‑1 (MQ=255)

                                    ccGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGcc                                                      >  1:10030307/1‑93 (MQ=255)

                                     cGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCa                                                     <  1:8402111/93‑1 (MQ=255)

                                      gggTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCAc                                                    <  2:6959681/93‑1 (MQ=255)

                                        gTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTg                                                  >  1:5540195/1‑93 (MQ=255)

                                          aTCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTc                                                >  2:7938660/1‑93 (MQ=255)

                                            cATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAt                                              <  2:6082257/93‑1 (MQ=255)

                                             aTTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAAGCGCCATCGCCACTGTCAtt                                             >  2:7077985/1‑93 (MQ=255)

                                             aTTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAtt                                             <  2:3051249/93‑1 (MQ=255)

                                             aTTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAtt                                             >  1:4740767/1‑93 (MQ=255)

                                               ttAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtg                                           >  2:4382090/1‑93 (MQ=255)

                                                tAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgc                                          <  2:9080401/93‑1 (MQ=255)

                                                tAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgc                                          <  1:7376902/93‑1 (MQ=255)

                                                 aaCTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgct                                         <  1:5280856/93‑1 (MQ=255)

                                                 aaCTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgct                                         <  2:3382917/93‑1 (MQ=255)

                                                  aCTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgctg                                        >  1:6263200/1‑93 (MQ=255)

                                                   cTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgctgc                                       <  2:2519484/93‑1 (MQ=255)

                                                   cTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgctgc                                       <  2:5367309/93‑1 (MQ=255)

                                                     ttAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaa                                     >  1:961387/1‑93 (MQ=255)

                                                      tAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaac                                    <  2:3240376/93‑1 (MQ=255)

                                                      tAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaac                                    <  1:9211560/93‑1 (MQ=255)

                                                       aaTTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaaca                                   <  1:359574/93‑1 (MQ=255)

                                                        aTTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGCGAACCGCCATCGCCACTGTCATTTGCTGcaacaa                                  >  2:4678789/1‑93 (MQ=255)

                                                        aTTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaacaa                                  <  1:1285576/93‑1 (MQ=255)

                                                         tttCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCaacaac                                 >  1:4428579/1‑93 (MQ=255)

                                                         tttCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCaacaac                                 <  2:7555699/93‑1 (MQ=255)

                                                         tttCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCaacaac                                 <  1:4539628/93‑1 (MQ=255)

                                                           tCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTg                               >  1:2781588/1‑93 (MQ=255)

                                                            cGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGc                              >  1:2180414/1‑93 (MQ=255)

                                                             gACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGCACCGCCATCGCCACTGTCATTTGCTGCAACAACTGcc                             >  1:7187898/1‑93 (MQ=255)

                                                             gACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGcc                             >  2:826516/1‑93 (MQ=255)

                                                              aCGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCa                            <  1:620934/93‑1 (MQ=255)

                                                               cgcgTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCaa                           <  1:210351/93‑1 (MQ=255)

                                                               cgcgTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCaa                           <  2:7384795/93‑1 (MQ=255)

                                                                gcgTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAAc                          >  1:1863931/1‑93 (MQ=255)

                                                                  gTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGt                        <  1:1145927/93‑1 (MQ=255)

                                                                   ttAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTc                       <  2:9841492/93‑1 (MQ=255)

                                                                          aGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCacac                >  2:9241236/1‑93 (MQ=255)

                                                                           gTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACAcc               >  1:1436706/1‑93 (MQ=255)

                                                                            tATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCa              <  1:2525817/93‑1 (MQ=255)

                                                                              ttAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAAc            <  1:8571632/93‑1 (MQ=255)

                                                                              ttAGCGTGTAGTGGGCGTGGTGATTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCAGCAACAACTACCAACGTCGCCACCCCacc            <  1:8939262/93‑3 (MQ=255)

                                                                               tAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACa           <  2:457268/93‑1 (MQ=255)

                                                                               tAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACa           >  2:8512818/1‑93 (MQ=255)

                                                                                 gCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGc         <  2:1422946/93‑1 (MQ=255)

                                                                                 gCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGc         <  1:5908369/93‑1 (MQ=255)

                                                                                  cGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGcc        <  2:2340654/93‑1 (MQ=255)

                                                                                  cGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGcc        <  2:7581701/93‑1 (MQ=255)

                                                                                    tgtAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGt      <  2:5756517/93‑1 (MQ=255)

                                                                                      tAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTg    >  1:5979592/1‑93 (MQ=255)

                                                                                        gTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGcc  <  1:7550907/93‑1 (MQ=255)

AATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCC  >  NC_000913/1048584‑1048764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCCA  >  NC_000913/1048583‑1048765

AAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGA                                                                                           >  SRR4302540.6515725/1‑94 (MQ=60)

 AATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGC                                                                                          <  SRR4302540.2293110/94‑1 (MQ=60)

 AATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGC                                                                                          <  SRR4302540.3566410/94‑1 (MQ=60)

 AATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGC                                                                                          >  SRR4302540.8351476/1‑94 (MQ=60)

  ATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCG                                                                                         >  SRR4302540.539856/1‑94 (MQ=60)

   TGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGT                                                                                        <  SRR4302540.7532725/94‑1 (MQ=60)

    GCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTG                                                                                       >  SRR4302540.8671922/1‑94 (MQ=60)

     CAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGG                                                                                      >  SRR4302540.2911495/1‑94 (MQ=60)

     CAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGG                                                                                      <  SRR4302540.69396/94‑1 (MQ=60)

     CAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGG                                                                                      >  SRR4302540.462149/1‑94 (MQ=60)

     CAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGG                                                                                      <  SRR4302540.2436525/94‑1 (MQ=60)

     CAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGG                                                                                      >  SRR4302540.2295010/1‑94 (MQ=60)

      AAATCTCTAAAGCCCGGTACGAATATCGCAACCAGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGT                                                                                     >  SRR4302540.8205796/1‑94 (MQ=60)

      AAATCTCGAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGT                                                                                     <  SRR4302540.8790233/94‑1 (MQ=60)

       AATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTG                                                                                    >  SRR4302540.4593143/1‑94 (MQ=60)

       AATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTG                                                                                    <  SRR4302540.185847/94‑1 (MQ=60)

       AATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTG                                                                                    <  SRR4302540.5330653/94‑1 (MQ=60)

       AATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTG                                                                                    <  SRR4302540.627061/94‑1 (MQ=60)

        ATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGG                                                                                   >  SRR4302540.4737534/1‑94 (MQ=60)

        ATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGG                                                                                   <  SRR4302540.9580787/94‑1 (MQ=60)

          CTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTT                                                                                 >  SRR4302540.5865341/1‑94 (MQ=60)

          CTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTT                                                                                 >  SRR4302540.196973/1‑94 (MQ=60)

          CTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTT                                                                                 >  SRR4302540.1926771/1‑94 (MQ=60)

          CTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTT                                                                                 >  SRR4302540.1438640/1‑94 (MQ=60)

          CTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTT                                                                                 >  SRR4302540.5206197/1‑94 (MQ=60)

          CTCTAAAGCCCGGTACGAATATCGCAACCGGGCATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGCGCGCGGTGGTT                                                                                 >  SRR4302540.1438641/1‑94 (MQ=60)

           TCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTG                                                                                >  SRR4302540.7378004/1‑94 (MQ=60)

            CTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGG                                                                               >  SRR4302540.3552556/1‑94 (MQ=60)

            CTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGA                                                                               >  SRR4302540.9945005/1‑94 (MQ=60)

             TAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAG                                                                              >  SRR4302540.2463092/1‑94 (MQ=60)

             TAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAG                                                                              <  SRR4302540.3956452/94‑1 (MQ=60)

             TAAAGCCCAGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAG                                                                              <  SRR4302540.913492/94‑1 (MQ=60)

             TAAAGCCCAGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAG                                                                              <  SRR4302540.913490/94‑1 (MQ=60)

              AAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGG                                                                             >  SRR4302540.4714268/1‑94 (MQ=60)

               AAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGT                                                                            >  SRR4302540.6650648/1‑94 (MQ=60)

               AAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGT                                                                            <  SRR4302540.4225983/94‑1 (MQ=60)

               AAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGT                                                                            >  SRR4302540.8843962/1‑94 (MQ=60)

                AGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTG                                                                           >  SRR4302540.6023980/1‑94 (MQ=60)

                AGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTG                                                                           <  SRR4302540.3828661/94‑1 (MQ=60)

                 GCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGT                                                                          <  SRR4302540.9447844/94‑1 (MQ=60)

                  CCCGGTACGAATATCGCATCCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTT                                                                         <  SRR4302540.9306255/94‑1 (MQ=60)

                  CCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTT                                                                         <  SRR4302540.8199902/94‑1 (MQ=60)

                  CCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGAGTGTAGTGGGCGTGGTGGTTGAGGTGTT                                                                         <  SRR4302540.9305987/94‑1 (MQ=60)

                   CCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTA                                                                        <  SRR4302540.9649337/94‑1 (MQ=60)

                   CCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTA                                                                        >  SRR4302540.226693/1‑94 (MQ=60)

                    CGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAT                                                                       <  SRR4302540.6309634/94‑1 (MQ=60)

                    CGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAT                                                                       >  SRR4302540.7038858/1‑94 (MQ=60)

                    CGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAT                                                                       <  SRR4302540.8056871/94‑1 (MQ=60)

                    CGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAT                                                                       >  SRR4302540.5170699/1‑94 (MQ=60)

                    CGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAT                                                                       <  SRR4302540.3116120/94‑1 (MQ=60)

                    CGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAT                                                                       <  SRR4302540.6898691/94‑1 (MQ=60)

                    CGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAT                                                                       >  SRR4302540.2218669/1‑94 (MQ=60)

                    CGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAT                                                                       >  SRR4302540.4350269/1‑94 (MQ=60)

                    CGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAT                                                                       <  SRR4302540.6898694/94‑1 (MQ=60)

                     GGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATG                                                                      <  SRR4302540.3003301/94‑1 (MQ=60)

                     GGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATG                                                                      <  SRR4302540.6300197/94‑1 (MQ=60)

                     GGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATG                                                                      <  SRR4302540.6300196/94‑1 (MQ=60)

                      GTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTGAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGA                                                                     <  SRR4302540.1511323/94‑1 (MQ=60)

                       TACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAG                                                                    <  SRR4302540.6906585/94‑1 (MQ=60)

                        ACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGA                                                                   >  SRR4302540.6445105/1‑94 (MQ=60)

                        ACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGA                                                                   >  SRR4302540.4543333/1‑94 (MQ=60)

                         CGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAA                                                                  <  SRR4302540.4755965/94‑1 (MQ=60)

                          GAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAAC                                                                 <  SRR4302540.243183/94‑1 (MQ=60)

                          GAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGGTGAGGTGTTATGAGAAC                                                                 >  SRR4302540.8889759/1‑94 (MQ=60)

                           AATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACC                                                                >  SRR4302540.4572270/1‑94 (MQ=60)

                           AATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACC                                                                <  SRR4302540.9774292/94‑1 (MQ=60)

                           AATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACC                                                                <  SRR4302540.7965034/94‑1 (MQ=60)

                           AATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAAAC                                                                >  SRR4302540.4572269/1‑94 (MQ=60)

                            ATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCG                                                               >  SRR4302540.599844/1‑94 (MQ=60)

                              ATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCC                                                             <  SRR4302540.7814545/94‑1 (MQ=60)

                              ATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCC                                                             <  SRR4302540.360435/94‑1 (MQ=60)

                              ATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCC                                                             >  SRR4302540.6433816/1‑94 (MQ=60)

                                CGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAT                                                           <  SRR4302540.1688361/94‑1 (MQ=60)

                                 GCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATC                                                          >  SRR4302540.5163832/1‑94 (MQ=60)

                                 GCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATC                                                          <  SRR4302540.4098011/94‑1 (MQ=60)

                                 GCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATC                                                          <  SRR4302540.7818958/94‑1 (MQ=60)

                                 GCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATC                                                          <  SRR4302540.3179446/94‑1 (MQ=60)

                                 GCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATC                                                          >  SRR4302540.4344632/1‑94 (MQ=60)

                                  CAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCG                                                         <  SRR4302540.1959039/94‑1 (MQ=60)

                                  CAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCG                                                         >  SRR4302540.2130778/1‑94 (MQ=60)

                                  CAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCG                                                         <  SRR4302540.4519111/94‑1 (MQ=60)

                                  CAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCG                                                         <  SRR4302540.1704367/94‑1 (MQ=60)

                                   AACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGC                                                        >  SRR4302540.5101789/1‑94 (MQ=60)

                                   AACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGC                                                        >  SRR4302540.8491783/1‑94 (MQ=60)

                                    ACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCC                                                       <  SRR4302540.9699897/94‑1 (MQ=60)

                                    ACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCC                                                       >  SRR4302540.10146990/1‑94 (MQ=60)

                                     CCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCA                                                      <  SRR4302540.10085599/94‑1 (MQ=60)

                                      CGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCAC                                                     <  SRR4302540.8499624/94‑1 (MQ=60)

                                       GGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACT                                                    <  SRR4302540.8143269/94‑1 (MQ=60)

                                        GGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTG                                                   >  SRR4302540.1055133/1‑94 (MQ=60)

                                        GGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTG                                                   >  SRR4302540.5601215/1‑94 (MQ=60)

                                          TATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTC                                                 >  SRR4302540.2552645/1‑94 (MQ=60)

                                            TCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAT                                               <  SRR4302540.162368/94‑1 (MQ=60)

                                             CATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATT                                              >  SRR4302540.4791358/1‑94 (MQ=60)

                                             CATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGGGTTATGAGACCCGCCATCGACCCTGTCATT                                              >  SRR4302540.4791359/1‑94 (MQ=60)

                                             CATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGCGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATT                                              >  SRR4302540.7633616/1‑94 (MQ=60)

                                              ATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTT                                             <  SRR4302540.8806659/94‑1 (MQ=60)

                                              ATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTT                                             >  SRR4302540.7720721/1‑94 (MQ=60)

                                              ATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTT                                             <  SRR4302540.1281940/94‑1 (MQ=60)

                                              ATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTT                                             >  SRR4302540.6026850/1‑94 (MQ=60)

                                                 TAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCT                                          >  SRR4302540.9730424/1‑94 (MQ=60)

                                                 TAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCT                                          <  SRR4302540.7459113/94‑1 (MQ=60)

                                                  AACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTG                                         >  SRR4302540.6332881/1‑94 (MQ=60)

                                                  AACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTG                                         <  SRR4302540.5338534/94‑1 (MQ=60)

                                                    CTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGAGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCGACTGCCATTTGCTGac                                       >  SRR4302540.1848753/1‑92 (MQ=60)

                                                     TTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAA                                      >  SRR4302540.971334/1‑94 (MQ=60)

                                                       TAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACA                                    <  SRR4302540.628/94‑1 (MQ=60)

                                                       TAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACA                                    <  SRR4302540.9322089/94‑1 (MQ=60)

                                                        AATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAA                                   <  SRR4302540.363270/94‑1 (MQ=60)

                                                         ATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAAC                                  >  SRR4302540.4476560/1‑94 (MQ=60)

                                                         ATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAAC                                  <  SRR4302540.3621842/94‑1 (MQ=60)

                                                         ATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAAC                                  <  SRR4302540.1298826/94‑1 (MQ=60)

                                                         ATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGGGTTATGAGAACCGCCATCGCCCCTGTCATTTGCggcacacac                                  >  SRR4302540.2818023/1‑85 (MQ=60)

                                                         ATTTCGACGCGTTAAAGCAGGATTATCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAAC                                  <  SRR4302540.2785079/94‑1 (MQ=60)

                                                          TTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGTCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACT                                 <  SRR4302540.4223137/94‑1 (MQ=60)

                                                          TTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACT                                 <  SRR4302540.8592007/94‑1 (MQ=60)

                                                          TTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACT                                 <  SRR4302540.6954357/94‑1 (MQ=60)

                                                          TTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACT                                 <  SRR4302540.4588760/94‑1 (MQ=60)

                                                          TTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACT                                 <  SRR4302540.5704120/94‑1 (MQ=60)

                                                           TTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTG                                >  SRR4302540.2811637/1‑94 (MQ=60)

                                                            TCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGC                               >  SRR4302540.2203932/1‑94 (MQ=60)

                                                             CGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGCACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCC                              >  SRR4302540.7268020/1‑94 (MQ=60)

                                                             CGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCC                              <  SRR4302540.404187/94‑1 (MQ=60)

                                                              GACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGGGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCA                             >  SRR4302540.3641372/1‑94 (MQ=60)

                                                               ACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAA                            >  SRR4302540.8580440/1‑94 (MQ=60)

                                                               ACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAA                            <  SRR4302540.627542/94‑1 (MQ=60)

                                                               ACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAA                            <  SRR4302540.627541/94‑1 (MQ=60)

                                                                CGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAAC                           >  SRR4302540.1884363/1‑94 (MQ=60)

                                                                CGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAAC                           <  SRR4302540.212407/94‑1 (MQ=60)

                                                                 GCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACG                          <  SRR4302540.6138542/94‑1 (MQ=60)

                                                                  CGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAccgc                         >  SRR4302540.8304412/1‑90 (MQ=60)

                                                                  CGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGT                         >  SRR4302540.2227313/1‑94 (MQ=60)

                                                                   GTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTC                        >  SRR4302540.5107261/1‑94 (MQ=60)

                                                                   GTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTC                        <  SRR4302540.1157890/94‑1 (MQ=60)

                                                                   GTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTC                        >  SRR4302540.869976/1‑94 (MQ=60)

                                                                     TAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGC                      >  SRR4302540.4505082/1‑94 (MQ=60)

                                                                           AGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACC                >  SRR4302540.1452290/1‑94 (MQ=60)

                                                                           AGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACC                <  SRR4302540.5537862/94‑1 (MQ=60)

                                                                            GTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCA               >  SRR4302540.3506522/1‑94 (MQ=60)

                                                                             TATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCCA              >  SRR4302540.7204067/1‑94 (MQ=60)

                                                                             TATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCCA              >  SRR4302540.7204068/1‑94 (MQ=60)

                                                                             TATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAA              <  SRR4302540.2553081/94‑1 (MQ=60)

                                                                             TATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAA              <  SRR4302540.3799144/94‑1 (MQ=60)

                                                                              ATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAAC             >  SRR4302540.6001321/1‑94 (MQ=60)

                                                                               TTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACA            <  SRR4302540.6980300/94‑1 (MQ=60)

                                                                               TTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACA            <  SRR4302540.2203862/94‑1 (MQ=60)

                                                                               TTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACA            <  SRR4302540.8671214/94‑1 (MQ=60)

                                                                               TTAGCGTGTAGTGGGCGTGGTGATTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCAGCAACAACTACCAACGTCGCCACCCCACCA            <  SRR4302540.9044082/94‑1 (MQ=60)

                                                                                TAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAG           <  SRR4302540.8790305/94‑1 (MQ=60)

                                                                                  GCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCC         <  SRR4302540.5973644/94‑1 (MQ=60)

                                                                                    GTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGT       <  SRR4302540.9362189/94‑1 (MQ=60)

                                                                                     TGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGTTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTT      <  SRR4302540.9104617/94‑1 (MQ=60)

                                                                                      GTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTG     >  SRR4302540.1283802/1‑94 (MQ=60)

                                                                                      GTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTG     >  SRR4302540.6045794/1‑94 (MQ=60)

                                                                                       TAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGC    >  SRR4302540.2041990/1‑94 (MQ=60)

                                                                                        AGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCC   >  SRR4302540.7381626/1‑94 (MQ=60)

                                                                                         GTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCCA  <  SRR4302540.7635547/94‑1 (MQ=60)

AAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCCA  >  NC_000913/1048583‑1048765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`