Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,048,676 |
A→G |
S104P (TCC→CCC) |
ymcD ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,048,676 | 0 | A | G | 99.5%
| 603.6
/ ‑4.7
| 190 | S104P (TCC→CCC) | ymcD | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (103/86); total (104/86) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01 |
Only 100 of 196 total aligned reads displayed.
GCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCC > NC_000913/1048587‑1048764
|
gCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgt < 1:4377308/93‑1 (MQ=255)
cAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtg > 1:5672218/1‑93 (MQ=255)
aaaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtgg > 1:497146/1‑93 (MQ=255)
aaaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtgg < 1:3225681/93‑1 (MQ=255)
aaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggt > 1:1115473/1‑93 (MQ=255)
aaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggt < 1:6021149/93‑1 (MQ=255)
aTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggtg < 2:4907671/93‑1 (MQ=255)
aTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggtg > 1:3430343/1‑93 (MQ=255)
tctcTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGtggtgg < 2:513625/93‑1 (MQ=255)
tctAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGtt > 2:5256244/1‑93 (MQ=255)
ctAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTg > 1:5345985/1‑93 (MQ=255)
tAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTACTTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGGTGa > 1:2194841/1‑93 (MQ=255)
aaaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAg > 1:69184/1‑93 (MQ=255)
aaaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAg > 2:3512155/1‑93 (MQ=255)
aGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGgt > 2:4927071/1‑93 (MQ=255)
aGCCCGGTACGAATATCACAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGgt > 2:1165838/1‑93 (MQ=255)
gCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGgtg < 2:4341998/93‑1 (MQ=255)
acccGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGgtg < 1:3130139/92‑1 (MQ=255)
ccGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGtt > 2:6022130/1‑93 (MQ=255)
cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa > 1:3444226/1‑93 (MQ=255)
ggTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGGTGAGGTGTTAt > 1:2787247/1‑93 (MQ=255)
gTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATg < 2:6418/93‑1 (MQ=255)
cGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATgaga < 2:1340680/93‑1 (MQ=255)
cGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATgaga < 1:988545/93‑1 (MQ=255)
gAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGaa < 2:728180/93‑1 (MQ=255)
gAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGaa < 1:4044372/93‑1 (MQ=255)
aaNATCNCAACCGGGTATCATNNAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAAc < 1:2323327/93‑1 (MQ=255)
tatCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGGTGAGGTGTTATGAGAACCg > 2:2247558/1‑93 (MQ=255)
atCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGc < 1:4598615/93‑1 (MQ=255)
atCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGACGGTTGAGGTGTTATGAGAACCGc < 2:880872/93‑1 (MQ=255)
gCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAt < 2:3367697/93‑1 (MQ=255)
cAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATc < 1:428671/93‑1 (MQ=255)
cAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATc < 2:6119013/93‑1 (MQ=255)
cAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATc < 1:3967852/93‑1 (MQ=255)
cAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATc < 2:3631225/93‑1 (MQ=255)
aCCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGc < 2:2163952/93‑1 (MQ=255)
ccGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGcc > 2:1079148/1‑93 (MQ=255)
cGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCa > 2:3827286/1‑93 (MQ=255)
cGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCa < 1:5644633/93‑1 (MQ=255)
cGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCa < 2:2703824/93‑1 (MQ=255)
gggTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCAc > 1:5076646/1‑93 (MQ=255)
gggTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCAc > 1:2733674/1‑93 (MQ=255)
gggTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCAc > 2:158734/1‑93 (MQ=255)
ggTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACt < 2:4202161/93‑1 (MQ=255)
ggTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACt > 1:1284608/1‑93 (MQ=255)
ggTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACt < 1:2976846/93‑1 (MQ=255)
gTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTg < 2:4512014/93‑1 (MQ=255)
gTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTg > 2:4578616/1‑93 (MQ=255)
gTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTg < 1:351888/93‑1 (MQ=255)
gTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGGTGAGGTGTTATGAGGACCGCCATCGCCACTg > 2:2613347/1‑93 (MQ=255)
tATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGt < 2:2495080/93‑1 (MQ=255)
tCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCa < 2:279914/93‑1 (MQ=255)
tCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCa > 1:4436649/1‑93 (MQ=255)
aTTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAtt > 2:598749/1‑93 (MQ=255)
aTTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAtt > 2:3082774/1‑93 (MQ=255)
tttAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAttt > 1:4919062/1‑93 (MQ=255)
tttAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAttt < 1:6053413/93‑1 (MQ=255)
tttAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAttt > 2:2381453/1‑93 (MQ=255)
aaCTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgct > 2:2016623/1‑93 (MQ=255)
tttAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCTCTGTACTTTGCTGca > 2:5652149/1‑93 (MQ=255)
aTTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaacaa < 1:2836208/93‑1 (MQ=255)
tttCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCaacaac < 2:2266482/93‑1 (MQ=255)
tCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCCACAACTg > 2:5588894/1‑93 (MQ=255)
tCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTg > 2:1919345/1‑93 (MQ=255)
gACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGcc > 2:5960093/1‑93 (MQ=255)
gACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGcc < 1:3325150/93‑1 (MQ=255)
cgcgTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCaa < 2:5772895/93‑1 (MQ=255)
gcgTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAAc < 1:4734251/93‑1 (MQ=255)
gTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGt < 1:361938/93‑1 (MQ=255)
gTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGt < 1:1621734/93‑1 (MQ=255)
gTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGGGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGt > 1:3503822/1‑93 (MQ=255)
aaaGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACTGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGc > 1:5021760/1‑93 (MQ=255)
aaaGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGc < 1:1669979/93‑1 (MQ=255)
aaaGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGc > 1:945539/1‑93 (MQ=255)
aaaGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGc > 1:6104591/1‑93 (MQ=255)
aaGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGcc > 1:794005/1‑93 (MQ=255)
aaGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGcc > 1:2104474/1‑93 (MQ=255)
aaGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGcc < 2:44419/93‑1 (MQ=255)
aGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGGCATTTGCTGCAACAACTGCCAACGTCGCca > 1:1468238/1‑93 (MQ=255)
gCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCcac > 2:5028285/1‑93 (MQ=255)
gCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCcac > 1:3286777/1‑93 (MQ=255)
gCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCcac < 2:2589383/93‑1 (MQ=255)
cAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCcaca > 2:1467070/1‑93 (MQ=255)
cAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCcaca < 1:158/93‑1 (MQ=255)
aGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCacac < 1:1761673/93‑1 (MQ=255)
gTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACAcc > 1:5445944/1‑93 (MQ=255)
gTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACAcc < 1:1888255/93‑1 (MQ=255)
gTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACAcc > 1:5806258/1‑93 (MQ=255)
gTATTAGCGTGTAGTGGGCGTGGTGGTTGACGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACAcc > 2:2947165/1‑93 (MQ=255)
tATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCa > 2:1855015/1‑93 (MQ=255)
aTTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCaa > 2:3760794/1‑93 (MQ=255)
ttAGGGTGTAGTGGGCGTGGTTGTTGAGGTGTTATGAGAACCGCCATCGCCCCTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAAc < 2:2656404/93‑1 (MQ=255)
aGCGTGTGGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCTACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAg < 1:103480/93‑1 (MQ=255)
gCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGc < 2:4706667/93‑1 (MQ=255)
ggtgtAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGcc < 1:4204411/92‑1 (MQ=255)
gtgtAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCg > 1:538513/1‑93 (MQ=255)
aGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGc < 1:3692923/93‑1 (MQ=255)
gTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGTCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGcc > 1:6143964/1‑93 (MQ=255)
gTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGcc > 2:4064365/1‑93 (MQ=255)
gTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGcc < 1:5595583/93‑1 (MQ=255)
|
GCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCC > NC_000913/1048587‑1048764
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCCACACC > NC_000913/1048583‑1048769
|
AAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGG > SRR4302533.1678849/1‑94 (MQ=60)
AAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGG > SRR4302533.1946671/1‑94 (MQ=60)
AATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGC > SRR4302533.4681452/1‑94 (MQ=60)
AATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGC > SRR4302533.2029502/1‑94 (MQ=60)
ATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCG < SRR4302533.4278882/94‑1 (MQ=60)
GCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTG < SRR4302533.4403735/94‑1 (MQ=60)
GCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTG > SRR4302533.5706476/1‑94 (MQ=60)
CAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGG > SRR4302533.500108/1‑94 (MQ=60)
CAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGG > SRR4302533.215257/1‑94 (MQ=60)
AAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGT < SRR4302533.3245568/94‑1 (MQ=60)
AAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGT < SRR4302533.3652118/94‑1 (MQ=60)
AAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGT > SRR4302533.793182/1‑94 (MQ=60)
AAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGT > SRR4302533.1122091/1‑94 (MQ=60)
AAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGG > SRR4302533.6306607/1‑94 (MQ=60)
AATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTG < SRR4302533.6057635/94‑1 (MQ=60)
AATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTG > SRR4302533.3451535/1‑94 (MQ=60)
ATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGG > SRR4302533.5685071/1‑94 (MQ=60)
ATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGG > SRR4302533.3286058/1‑94 (MQ=60)
ACTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGT < SRR4302533.605914/94‑1 (MQ=60)
TCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTG > SRR4302533.5378048/1‑94 (MQ=60)
CTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTACTTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGGTGA > SRR4302533.2208365/1‑94 (MQ=60)
TAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAG > SRR4302533.2324199/1‑94 (MQ=60)
TAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAG > SRR4302533.5081231/1‑94 (MQ=60)
TAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAG > SRR4302533.69636/1‑94 (MQ=60)
AGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTG < SRR4302533.2806006/94‑1 (MQ=60)
AGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTG > SRR4302533.3611381/1‑94 (MQ=60)
GCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGT > SRR4302533.1771864/1‑94 (MQ=60)
ACCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGT < SRR4302533.3149386/94‑1 (MQ=60)
CCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTA > SRR4302533.4225217/1‑94 (MQ=60)
CCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTA > SRR4302533.1004251/1‑94 (MQ=60)
CCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTA > SRR4302533.3465498/1‑94 (MQ=60)
CGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAT > SRR4302533.3156083/1‑94 (MQ=60)
CGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGGTGAGGTGTTAT > SRR4302533.2804373/1‑94 (MQ=60)
TACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAG < SRR4302533.5390671/94‑1 (MQ=60)
CGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAA > SRR4302533.4273598/1‑94 (MQ=60)
CGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAA < SRR4302533.5468695/94‑1 (MQ=60)
CGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAA < SRR4302533.994329/94‑1 (MQ=60)
GAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAAC < SRR4302533.4068988/94‑1 (MQ=60)
AATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACC > SRR4302533.4828982/1‑94 (MQ=60)
AANATCNCAACCGGGTATCATNNAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACC < SRR4302533.2337708/94‑1 (MQ=60)
ATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCC < SRR4302533.296138/94‑1 (MQ=60)
ATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCC < SRR4302533.4626476/94‑1 (MQ=60)
CGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAT > SRR4302533.1309241/1‑94 (MQ=60)
GCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATC < SRR4302533.15941/94‑1 (MQ=60)
CAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCG < SRR4302533.431227/94‑1 (MQ=60)
CAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCG > SRR4302533.4003901/1‑94 (MQ=60)
CAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCG < SRR4302533.3992022/94‑1 (MQ=60)
CGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCAC > SRR4302533.2750442/1‑94 (MQ=60)
CGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCAC < SRR4302533.5678757/94‑1 (MQ=60)
CGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCAC > SRR4302533.5107332/1‑94 (MQ=60)
GGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACT > SRR4302533.1292335/1‑94 (MQ=60)
GGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTG < SRR4302533.2995059/94‑1 (MQ=60)
GGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGCGGTTGAGGTGTTATGAGAACCGCCATCGCCACTG > SRR4302533.6043050/1‑94 (MQ=60)
GTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGT < SRR4302533.354035/94‑1 (MQ=60)
TATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTC > SRR4302533.4409288/1‑94 (MQ=60)
ATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCA > SRR4302533.4463469/1‑94 (MQ=60)
CATTTAACTTTAATTTCGACGCTTTAAA‑CCGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTT < SRR4302533.5201425/94‑1 (MQ=60)
ATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTT > SRR4302533.4948859/1‑94 (MQ=60)
ATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTT < SRR4302533.4955429/94‑1 (MQ=60)
TTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTG < SRR4302533.6090074/94‑1 (MQ=60)
TTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTG > SRR4302533.2776347/1‑94 (MQ=60)
TAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCT > SRR4302533.3010299/1‑94 (MQ=60)
TAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCT < SRR4302533.5671456/94‑1 (MQ=60)
AACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGAGTGATGAGAACCGCCATCGCCACTGTCATTTGCTG > SRR4302533.257818/1‑94 (MQ=60)
ACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGC < SRR4302533.353212/94‑1 (MQ=60)
CTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCA > SRR4302533.345842/1‑94 (MQ=60)
AATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAA > SRR4302533.3365353/1‑94 (MQ=60)
ATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAAC < SRR4302533.1490171/94‑1 (MQ=60)
ATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAAC < SRR4302533.2853661/94‑1 (MQ=60)
ATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAAC > SRR4302533.5602180/1‑94 (MQ=60)
TTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACT < SRR4302533.5042560/94‑1 (MQ=60)
GACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCA < SRR4302533.3345694/94‑1 (MQ=60)
GACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCA < SRR4302533.6095131/94‑1 (MQ=60)
CGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAAC < SRR4302533.964187/94‑1 (MQ=60)
GCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACG < SRR4302533.4762952/94‑1 (MQ=60)
CGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGT > SRR4302533.1837296/1‑94 (MQ=60)
CGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGGGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGT > SRR4302533.3525421/1‑94 (MQ=60)
CGTTAAAGCAGTATTAGCGTGTAGTGGGCGGGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGT > SRR4302533.6240771/1‑94 (MQ=60)
GTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTC > SRR4302533.3318916/1‑94 (MQ=60)
GTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTC < SRR4302533.1631562/94‑1 (MQ=60)
GTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTC < SRR4302533.364139/94‑1 (MQ=60)
TTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCG < SRR4302533.2116557/94‑1 (MQ=60)
TAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACTGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGC > SRR4302533.5052173/1‑94 (MQ=60)
TAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGC > SRR4302533.951100/1‑94 (MQ=60)
TAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGC > SRR4302533.6141437/1‑94 (MQ=60)
AAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCC < SRR4302533.1486920/94‑1 (MQ=60)
AAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCC > SRR4302533.2117447/1‑94 (MQ=60)
AAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCC > SRR4302533.1637313/1‑94 (MQ=60)
AAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCC < SRR4302533.1680069/94‑1 (MQ=60)
AAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCC > SRR4302533.798676/1‑94 (MQ=60)
AAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGGCATTTGCTGCAACAACTGCCAACGTCGCCA > SRR4302533.1477092/1‑94 (MQ=60)
AGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCAC > SRR4302533.3307067/1‑94 (MQ=60)
CAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACAC > SRR4302533.116997/1‑94 (MQ=60)
CAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACAC < SRR4302533.159/94‑1 (MQ=60)
AGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACC > SRR4302533.5478753/1‑94 (MQ=60)
AGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACC < SRR4302533.1772406/94‑1 (MQ=60)
AGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACC > SRR4302533.5841321/1‑94 (MQ=60)
GTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCA < SRR4302533.1899791/94‑1 (MQ=60)
TTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACA < SRR4302533.5804494/94‑1 (MQ=60)
TAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAG < SRR4302533.4387547/94‑1 (MQ=60)
TAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAG < SRR4302533.4616406/94‑1 (MQ=60)
AGCGTGTGGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCTACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGC < SRR4302533.104128/94‑1 (MQ=60)
GGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCG < SRR4302533.4229845/94‑1 (MQ=60)
CGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCG > SRR4302533.6146185/1‑94 (MQ=60)
CGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCG > SRR4302533.541714/1‑94 (MQ=60)
TGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTT < SRR4302533.3479245/94‑1 (MQ=60)
AGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGTCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCC > SRR4302533.6180959/1‑94 (MQ=60)
AGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCC < SRR4302533.3715611/94‑1 (MQ=60)
GTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCCA < SRR4302533.5629395/94‑1 (MQ=60)
GTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCCA < SRR4302533.4691250/94‑1 (MQ=60)
GCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCCACACC > SRR4302533.522033/1‑94 (MQ=60)
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AAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCCACACC > NC_000913/1048583‑1048769
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
