Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,125,352 |
T→C |
W190R (TGG→CGG) |
rimJ → |
acetylation of N‑terminal alanine of 30S ribosomal subunit protein S5 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,125,352 | 0 | T | C | 100.0%
| 630.3
/ NA
| 195 | W190R (TGG→CGG) | rimJ | acetylation of N‑terminal alanine of 30S ribosomal subunit protein S5 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (94/101); total (94/101) |
Only 100 of 199 total aligned reads displayed.
GGTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACTGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGT > NC_000913/1125262‑1125441
|
ggTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCgg > 2:2774440/1‑93 (MQ=255)
gTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGa < 2:2540528/93‑1 (MQ=255)
ttttGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGAc > 1:6258992/1‑93 (MQ=255)
tttGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACg < 1:699197/93‑1 (MQ=255)
ttGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGc > 1:1021737/1‑93 (MQ=255)
tGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGcc < 2:4207837/93‑1 (MQ=255)
gAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGccc < 2:3125119/93‑1 (MQ=255)
gAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGccc < 1:4290517/93‑1 (MQ=255)
gAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATAGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGccc < 2:3419549/93‑1 (MQ=255)
aaaaaGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCg < 1:3840379/93‑1 (MQ=255)
aaaGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGCCATTAACTACCCCAGACCGGACGCCCGGc > 1:1747109/1‑93 (MQ=255)
aaaGAAGGCTATGCAAAAGATCATCTTTTGAGTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGc < 2:4836829/93‑1 (MQ=255)
aagaagGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGcc < 2:750082/93‑1 (MQ=255)
aagaagGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGcc < 2:5760332/93‑1 (MQ=255)
agaagGCTATGCGAAAGACTATCTGTTGATTGATGAACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCg > 1:2162250/1‑93 (MQ=255)
gaagGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGc < 2:3933921/93‑1 (MQ=255)
agGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTa < 2:652481/93‑1 (MQ=255)
ggCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTaa < 1:5096832/93‑1 (MQ=255)
gCTATGCGAAAGACTATCTGTTGATGGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAg < 1:5963519/93‑1 (MQ=255)
cTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAgg < 1:2774440/93‑1 (MQ=255)
cTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAgg > 1:4001761/1‑93 (MQ=255)
tATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACACCAGACCGGACGCCCGGCCGCTCAGga > 1:970179/1‑93 (MQ=255)
aTGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGgag < 2:4712897/93‑1 (MQ=255)
aTGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGgag > 1:3579872/1‑93 (MQ=255)
tGCGAAAGACTATCTGTTGATTGATGGAGAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGgaga < 1:5326371/93‑1 (MQ=255)
gCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGaa > 1:288676/1‑93 (MQ=255)
gAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAtc > 2:5341502/1‑93 (MQ=255)
aaGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAtctc < 1:338672/93‑1 (MQ=255)
aaGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAtctc > 2:2531852/1‑93 (MQ=255)
aaGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAtctc > 2:1770778/1‑93 (MQ=255)
aaGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAtctc < 2:524897/93‑1 (MQ=255)
aGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCa < 1:102590/93‑1 (MQ=255)
aGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCa > 1:407624/1‑93 (MQ=255)
aCTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATg > 2:5083744/1‑93 (MQ=255)
aCTATCTCTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATg < 1:2478628/93‑1 (MQ=255)
tATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGaa > 1:880683/1‑93 (MQ=255)
tATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGaa > 1:1592387/1‑93 (MQ=255)
aTCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGaaa > 1:793438/1‑93 (MQ=255)
aTCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGaaa < 1:2061108/93‑1 (MQ=255)
tCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAat < 2:6215427/93‑1 (MQ=255)
tCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAat < 1:5588448/93‑1 (MQ=255)
ttgtgGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAata < 2:4012421/92‑1 (MQ=255)
cTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAata > 2:5972789/1‑93 (MQ=255)
cTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGCCCGCTAAGGAGAATCTCATGAAata < 1:4688531/93‑1 (MQ=255)
tGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAatat > 1:1287607/1‑93 (MQ=255)
tGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAatat < 2:5400180/93‑1 (MQ=255)
gTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATc < 1:1321005/93‑1 (MQ=255)
ttgattgaTGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCa < 1:5452642/93‑1 (MQ=255)
tgattgatGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCaa < 1:3879460/93‑1 (MQ=255)
tattgatGGACAATGGCGCGATCACGGAATGACGGCCTTTACTACCCCCGACCGGGCCCCCGGGCGCTAAGGAGAATCTCATGAAATATTAAc > 2:4947263/2‑93 (MQ=255)
gattgatGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAAc > 2:4378918/1‑93 (MQ=255)
attgatGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACt < 1:1501278/93‑1 (MQ=255)
ttgatGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACtt > 2:3172883/1‑93 (MQ=255)
ttgatGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACtt > 1:4378092/1‑93 (MQ=255)
tGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTg < 2:3221437/93‑1 (MQ=255)
gACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGcc > 1:2196126/1‑93 (MQ=255)
aCAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGccc > 1:1122875/1‑93 (MQ=255)
cAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCt > 2:5815733/1‑93 (MQ=255)
tGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGa < 1:3292902/93‑1 (MQ=255)
ggCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGaa < 1:3068660/93‑1 (MQ=255)
ggCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGaa < 2:1208118/93‑1 (MQ=255)
gcgcGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAg < 1:4482015/93‑1 (MQ=255)
cgcgATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGc < 2:1854751/93‑1 (MQ=255)
cgcgATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGc < 2:5222077/93‑1 (MQ=255)
cgATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTc > 1:1707088/1‑93 (MQ=255)
gATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTcg < 2:3627445/93‑1 (MQ=255)
aTCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTCGAAGCTcgc > 1:4415207/1‑93 (MQ=255)
cACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGt < 1:6056358/93‑1 (MQ=255)
aCGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTg > 1:5855285/1‑93 (MQ=255)
gTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGAt > 1:447393/1‑93 (MQ=255)
ctACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGAt < 1:5695011/92‑1 (MQ=255)
tACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGAtt > 1:272562/1‑93 (MQ=255)
tACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGAtt > 1:3223299/1‑93 (MQ=255)
cTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGTGTGATTgg < 2:6145430/93‑1 (MQ=255)
tGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGt < 2:4617847/93‑1 (MQ=255)
gACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGtt > 2:904963/1‑93 (MQ=255)
aCGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGttg > 2:4288909/1‑93 (MQ=255)
cGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGttgc > 2:2072437/1‑93 (MQ=255)
cGGCATTAACTACCCCAGACCGGACGCCCCGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGgtgc > 2:4489738/1‑93 (MQ=255)
gCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGttgctt > 2:5042180/1‑93 (MQ=255)
gCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGttgctt > 1:2820390/1‑93 (MQ=255)
gCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGttgctt < 2:2196053/93‑1 (MQ=255)
tAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTg > 2:2842547/1‑93 (MQ=255)
tAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTg > 1:3332245/1‑93 (MQ=255)
aaCTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTgg < 2:229311/93‑1 (MQ=255)
aCTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGa > 1:4869340/1‑93 (MQ=255)
cTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGaa > 1:4784537/1‑93 (MQ=255)
tACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGaaa > 1:4220810/1‑93 (MQ=255)
tACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGaaa < 2:5485161/93‑1 (MQ=255)
aCCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGaaaa > 1:4575198/1‑93 (MQ=255)
ccccAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAg < 1:1537385/93‑1 (MQ=255)
cccAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGc < 2:4079982/93‑1 (MQ=255)
ccAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCa > 1:5278977/1‑93 (MQ=255)
ccAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCa < 2:6077012/93‑1 (MQ=255)
ccAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCa > 1:586728/1‑93 (MQ=255)
cAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAg < 1:5190845/93‑1 (MQ=255)
cAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAg < 1:5724269/93‑1 (MQ=255)
gACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAggg > 2:2405217/1‑92 (MQ=255)
gACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGt > 2:1221342/1‑93 (MQ=255)
gACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGt < 1:3281712/93‑1 (MQ=255)
|
GGTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACTGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGT > NC_000913/1125262‑1125441
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGGTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACTGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGTGACC > NC_000913/1125260‑1125445
|
TGGGTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCG > SRR4302533.5592838/1‑94 (MQ=60)
GTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGAC < SRR4302533.443936/94‑1 (MQ=60)
GTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGAC > SRR4302533.6296416/1‑94 (MQ=60)
TTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACG < SRR4302533.5448922/94‑1 (MQ=60)
TTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACG < SRR4302533.4298938/94‑1 (MQ=60)
TTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGC > SRR4302533.1027739/1‑94 (MQ=60)
TTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGC < SRR4302533.703337/94‑1 (MQ=60)
TGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCC < SRR4302533.1536013/94‑1 (MQ=60)
TGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCC < SRR4302533.2849735/94‑1 (MQ=60)
GAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCG < SRR4302533.4316320/94‑1 (MQ=60)
AAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGG < SRR4302533.3863841/94‑1 (MQ=60)
AAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGCCATTAACTACCCCAGACCGGACGCCCGGC > SRR4302533.1757741/1‑94 (MQ=60)
AAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCC > SRR4302533.710397/1‑94 (MQ=60)
AAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCG > SRR4302533.2769664/1‑94 (MQ=60)
AAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGAACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCG > SRR4302533.2175556/1‑94 (MQ=60)
AGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGC > SRR4302533.589399/1‑94 (MQ=60)
GAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCT < SRR4302533.3288377/94‑1 (MQ=60)
AAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTA < SRR4302533.5323446/94‑1 (MQ=60)
AGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAA < SRR4302533.2905615/94‑1 (MQ=60)
GGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAG < SRR4302533.5127626/94‑1 (MQ=60)
GGCTATGCGAAAGACTATCTGTTGATTGATGGACAAGGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAG < SRR4302533.2944162/94‑1 (MQ=60)
AGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGAGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAG < SRR4302533.1617146/94‑1 (MQ=60)
GCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGG < SRR4302533.5999599/94‑1 (MQ=60)
GCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGG > SRR4302533.4026130/1‑94 (MQ=60)
GCTATGCGAAAGACTATCTGTTGATGGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGG < SRR4302533.5999598/94‑1 (MQ=60)
CTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGA < SRR4302533.4526005/94‑1 (MQ=60)
CTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGA < SRR4302533.2791481/94‑1 (MQ=60)
CTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACACCAGACCGGACGCCCGGCCGCTCAGGA > SRR4302533.975870/1‑94 (MQ=60)
TATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAG < SRR4302533.1732870/94‑1 (MQ=60)
TATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAG > SRR4302533.3601930/1‑94 (MQ=60)
TGCGAAAGACTATCTGTTGATTGATGGAGAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAA < SRR4302533.5358292/94‑1 (MQ=60)
TGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAA > SRR4302533.290439/1‑94 (MQ=60)
CGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATC > SRR4302533.2300275/1‑94 (MQ=60)
GAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCT > SRR4302533.1324687/1‑94 (MQ=60)
GAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCT > SRR4302533.962904/1‑94 (MQ=60)
GAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCT < SRR4302533.5787528/94‑1 (MQ=60)
AAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCA > SRR4302533.410075/1‑94 (MQ=60)
AAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCA < SRR4302533.340736/94‑1 (MQ=60)
AAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCA < SRR4302533.331098/94‑1 (MQ=60)
AGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCtgccggctaggaggaacccatg > SRR4302533.2718986/1‑72 (MQ=60)
AGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCAT < SRR4302533.103229/94‑1 (MQ=60)
ACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGA < SRR4302533.1263903/94‑1 (MQ=60)
ACTATCTCTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGA < SRR4302533.2493914/94‑1 (MQ=60)
CTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAA > SRR4302533.885854/1‑94 (MQ=60)
CTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAA > SRR4302533.5216115/1‑94 (MQ=60)
CTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAA > SRR4302533.1602021/1‑94 (MQ=60)
TATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAA > SRR4302533.798108/1‑94 (MQ=60)
ATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAAT < SRR4302533.2073819/94‑1 (MQ=60)
ATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAAT < SRR4302533.4212411/94‑1 (MQ=60)
TCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATA < SRR4302533.5622212/94‑1 (MQ=60)
CTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATAT > SRR4302533.1295353/1‑94 (MQ=60)
CTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGCCCGCTAAGGAGAATCTCATGAAATAT < SRR4302533.4716953/94‑1 (MQ=60)
GTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCA < SRR4302533.3724981/94‑1 (MQ=60)
GTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCA < SRR4302533.1328934/94‑1 (MQ=60)
GTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCA < SRR4302533.4502770/94‑1 (MQ=60)
TTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAA < SRR4302533.5485486/94‑1 (MQ=60)
TTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAA > SRR4302533.6335604/1‑94 (MQ=60)
TGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAAC < SRR4302533.3903132/94‑1 (MQ=60)
GATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACT > SRR4302533.2540316/1‑94 (MQ=60)
ATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTT < SRR4302533.1510326/94‑1 (MQ=60)
ATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTT > SRR4302533.4404526/1‑94 (MQ=60)
TGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTAC > SRR4302533.464371/1‑94 (MQ=60)
GATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACT < SRR4302533.3113397/94‑1 (MQ=60)
ATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTG < SRR4302533.1593204/94‑1 (MQ=60)
TGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGC < SRR4302533.5735642/94‑1 (MQ=60)
GGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCC > SRR4302533.2794097/1‑94 (MQ=60)
GGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCC > SRR4302533.2209660/1‑94 (MQ=60)
GACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCC > SRR4302533.1129540/1‑94 (MQ=60)
AATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTG > SRR4302533.3437435/1‑94 (MQ=60)
AATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTG > SRR4302533.4375941/1‑94 (MQ=60)
ATGGCGCGATCACGTACTGAAGGCATTAACTACCCCATACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTGCTTCCCTTGA > SRR4302533.3321578/1‑94 (MQ=60)
TGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAA < SRR4302533.3313228/94‑1 (MQ=60)
GGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAG < SRR4302533.3087503/94‑1 (MQ=60)
GCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGC < SRR4302533.4509140/94‑1 (MQ=60)
GCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTC < SRR4302533.3906904/94‑1 (MQ=60)
GCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTC > SRR4302533.1717433/1‑94 (MQ=60)
CGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCG > SRR4302533.3865821/1‑94 (MQ=60)
GATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTCGAAGCTCGC > SRR4302533.4441869/1‑94 (MQ=60)
CACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTG < SRR4302533.6093031/94‑1 (MQ=60)
CACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTG > SRR4302533.5890682/1‑94 (MQ=60)
ACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGA < SRR4302533.5633475/94‑1 (MQ=60)
CGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGAT > SRR4302533.450069/1‑94 (MQ=60)
GTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATT > SRR4302533.3243175/1‑94 (MQ=60)
GTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATT > SRR4302533.274220/1‑94 (MQ=60)
GTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATT > SRR4302533.2014367/1‑94 (MQ=60)
CTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATT < SRR4302533.5729403/94‑1 (MQ=60)
TACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTG < SRR4302533.4032495/94‑1 (MQ=60)
TACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTG > SRR4302533.81935/1‑94 (MQ=60)
CTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGT > SRR4302533.2177592/1‑94 (MQ=60)
TGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTT > SRR4302533.3361728/1‑94 (MQ=60)
CGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCT < SRR4302533.1393029/94‑1 (MQ=60)
GTCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCATCTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTT < SRR4302533.5513964/94‑1 (MQ=60)
GGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTT > SRR4302533.2837746/1‑94 (MQ=60)
GCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTG > SRR4302533.5029578/1‑94 (MQ=60)
GCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTG > SRR4302533.4884009/1‑94 (MQ=60)
ATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCT < SRR4302533.3318487/94‑1 (MQ=60)
TTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTG > SRR4302533.3352838/1‑94 (MQ=60)
AACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGA > SRR4302533.4898846/1‑94 (MQ=60)
AACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGA > SRR4302533.4453068/1‑94 (MQ=60)
ACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAA > SRR4302533.4813516/1‑94 (MQ=60)
CTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAA > SRR4302533.4246334/1‑94 (MQ=60)
TACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAA > SRR4302533.4602925/1‑94 (MQ=60)
CCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGC < SRR4302533.1546621/94‑1 (MQ=60)
CCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCA > SRR4302533.590191/1‑94 (MQ=60)
CCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCA < SRR4302533.5946100/94‑1 (MQ=60)
CCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCA > SRR4302533.5310618/1‑94 (MQ=60)
CCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCA < SRR4302533.1100082/94‑1 (MQ=60)
CCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAG > SRR4302533.5255531/1‑94 (MQ=60)
CCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAG < SRR4302533.6208390/94‑1 (MQ=60)
CAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGG < SRR4302533.5758830/94‑1 (MQ=60)
CAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGG < SRR4302533.5222162/94‑1 (MQ=60)
AGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGT < SRR4302533.474476/94‑1 (MQ=60)
AGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGT > SRR4302533.2161302/1‑94 (MQ=60)
GACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGTG > SRR4302533.964770/1‑94 (MQ=60)
GACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGTG < SRR4302533.3301973/94‑1 (MQ=60)
ACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGTGA < SRR4302533.4865035/94‑1 (MQ=60)
ACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGTGA < SRR4302533.704142/94‑1 (MQ=60)
CCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGTGAC > SRR4302533.3800889/1‑94 (MQ=60)
CCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGTGAC < SRR4302533.1055845/94‑1 (MQ=60)
CGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGTGACC > SRR4302533.3794238/1‑94 (MQ=60)
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TGGGTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACTGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGTGACC > NC_000913/1125260‑1125445
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
