Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,145,923 |
T→C |
intergenic (‑66/‑94) |
yceF ← / → yceD |
hypothetical protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,145,923 | 0 | T | C | 100.0%
| 702.4
/ NA
| 216 | intergenic (‑66/‑94) | yceF/yceD | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (106/110); total (106/110) |
Only 100 of 224 total aligned reads displayed.
ATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGTAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGCGC > NC_000913/1145834‑1146011
|
atatAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAc > 2:3587771/1‑93 (MQ=255)
tataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAcc < 1:1375295/93‑1 (MQ=255)
tataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAcc > 1:3801250/1‑93 (MQ=255)
ataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCCAccc > 2:6228734/1‑93 (MQ=255)
ataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAccc > 2:1659778/1‑93 (MQ=255)
ataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAccc > 2:2441132/1‑93 (MQ=255)
ataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAccc < 2:3723039/93‑1 (MQ=255)
aGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAccccc < 2:6207342/93‑3 (MQ=255)
aGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGc < 1:965705/93‑1 (MQ=255)
aGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGc < 2:501829/93‑1 (MQ=255)
gCGTCTTGATGATAACCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGAAGAAAGCCGCa > 2:4516845/1‑93 (MQ=255)
gCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCa > 1:3438188/1‑93 (MQ=255)
gCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCa > 2:4884421/1‑93 (MQ=255)
cGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCaa < 2:5708068/93‑1 (MQ=255)
tATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTATGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtg < 1:4448626/93‑1 (MQ=255)
aTTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtgt > 2:2703804/1‑93 (MQ=255)
ttGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtgtg > 1:5975579/1‑93 (MQ=255)
gatgatAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTTTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtgtgtg < 2:3386222/93‑1 (MQ=255)
atgatAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGc > 2:2541135/1‑93 (MQ=255)
gatAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGa > 1:4188179/1‑93 (MQ=255)
gatAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGa > 1:4713401/1‑93 (MQ=255)
gatAGCCATTTTAAACTATGCGCTTCGTTTAGCAGGTTGATGTTTTTTATCAGCACTGAACGAAAATAAAGCAGCAACCAGCAATGTGTGCGa > 2:4914248/1‑93 (MQ=255)
atAGCCATTTTAAACTATGCGCTGCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGaa < 2:4271959/93‑1 (MQ=255)
tAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAat > 2:5920593/1‑93 (MQ=255)
tAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAat > 1:5284724/1‑93 (MQ=255)
cATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAattatt > 1:2390092/1‑93 (MQ=255)
tgtttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTg < 1:5189217/91‑1 (MQ=255)
ttttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTgg > 2:548238/1‑93 (MQ=255)
ttttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTgg > 2:1555747/1‑93 (MQ=255)
tttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGc < 2:2844369/93‑1 (MQ=255)
ttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCa > 2:872498/1‑93 (MQ=255)
ttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCa > 1:2876528/1‑93 (MQ=255)
aaaCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCaaa < 1:2724069/93‑1 (MQ=255)
aaCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCaaaa < 2:310735/93‑1 (MQ=255)
aaCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCaaaa < 1:224497/93‑1 (MQ=255)
aCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAg > 1:725500/1‑93 (MQ=255)
tATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGc < 2:2932213/93‑1 (MQ=255)
tGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTCTTGGCATAAGGCaa > 2:1100668/1‑93 (MQ=255)
tGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCaa < 2:3775252/93‑1 (MQ=255)
tGCGCTTCGTTTTGCAGGTTGACGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCaa > 2:5075996/1‑93 (MQ=255)
gcgcTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAAc < 1:208523/93‑1 (MQ=255)
gcgcTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAAc < 2:3148940/93‑1 (MQ=255)
gcgcTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAAc < 1:4318217/93‑1 (MQ=255)
gcTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACca < 1:5091625/93‑1 (MQ=255)
cTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcac < 1:741518/93‑1 (MQ=255)
ttCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcaca > 2:4369843/1‑93 (MQ=255)
ttCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcaca > 1:6165300/1‑93 (MQ=255)
ttCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcaca > 2:3496687/1‑93 (MQ=255)
ttCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcaca > 2:342136/1‑93 (MQ=255)
ttCGATTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcaca < 2:2651777/93‑1 (MQ=255)
tCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAGCCACAg < 2:485814/93‑1 (MQ=255)
tCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAg > 2:3321879/1‑93 (MQ=255)
gTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGc < 2:2873843/93‑1 (MQ=255)
gTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGc < 2:1351611/93‑1 (MQ=255)
gTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGc < 2:5347039/93‑1 (MQ=255)
gTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGc < 1:4799467/93‑1 (MQ=255)
ttttGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCt > 2:1161722/1‑93 (MQ=255)
aGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCttt < 1:5528326/93‑1 (MQ=255)
ggTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCtttt > 1:393880/1‑93 (MQ=255)
ggTTGAGGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCtttt > 2:5237571/1‑93 (MQ=255)
gTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCttttt > 1:5342161/1‑93 (MQ=255)
gTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCttttt < 2:4489505/93‑1 (MQ=255)
ttGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTc < 2:1810181/93‑1 (MQ=255)
gATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCtt > 2:2179196/1‑93 (MQ=255)
gATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCtt > 1:7791/1‑93 (MQ=255)
tgtttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTg > 1:3078791/1‑93 (MQ=255)
gtttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGa > 1:4026387/1‑93 (MQ=255)
gtttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGa < 1:1290290/93‑1 (MQ=255)
gtttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGa < 2:1062785/93‑1 (MQ=255)
tttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGAc > 1:3633478/1‑93 (MQ=255)
tttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGAc > 1:1040593/1‑93 (MQ=255)
ttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTa > 1:3852763/1‑93 (MQ=255)
tATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTAt > 1:628678/1‑93 (MQ=255)
tATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTAt < 1:1536212/93‑1 (MQ=255)
tATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTAt < 2:3780094/93‑1 (MQ=255)
aTCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATg > 2:4562701/1‑93 (MQ=255)
tCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGa < 1:842470/93‑1 (MQ=255)
tCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGa < 1:4220138/93‑1 (MQ=255)
tCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGa > 2:2929422/1‑93 (MQ=255)
aGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACg > 2:6164186/1‑93 (MQ=255)
gCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGt < 2:4350206/93‑1 (MQ=255)
gCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGt > 1:650591/1‑93 (MQ=255)
gCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGt > 2:2137707/1‑93 (MQ=255)
cACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAGCCACAGGCTGCCTTTTTCTTTGACTCTATGACGtt < 2:1775033/93‑1 (MQ=255)
aCTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTa > 1:5636107/1‑93 (MQ=255)
tGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACa < 1:1783066/93‑1 (MQ=255)
gAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaa > 2:2916160/1‑93 (MQ=255)
gAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaa > 2:2235029/1‑93 (MQ=255)
aaCGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaaa < 2:4457050/93‑1 (MQ=255)
aaCGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaaa < 2:4042172/93‑1 (MQ=255)
aaCGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaaa < 2:2996452/93‑1 (MQ=255)
aaCGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaaa > 1:4997882/1‑93 (MQ=255)
aaaaTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTa > 2:4139984/1‑93 (MQ=255)
aaaaTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTa < 2:5372205/93‑1 (MQ=255)
aaaaTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTa < 1:1175367/93‑1 (MQ=255)
aTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAata < 1:5645753/93‑1 (MQ=255)
aTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAata < 1:2546847/93‑1 (MQ=255)
aaGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATgc < 1:5821931/93‑1 (MQ=255)
agcagcAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATgcg > 2:1422170/1‑93 (MQ=255)
gcagcaACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATgcgc < 2:5654053/93‑1 (MQ=255)
|
ATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGTAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGCGC > NC_000913/1145834‑1146011
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCAGATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGTAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGCGCG > NC_000913/1145830‑1146012
|
TCAGATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGC < SRR4302533.3184749/94‑1 (MQ=60)
TCAGATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGC > SRR4302533.1385018/1‑94 (MQ=60)
CAGATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCA > SRR4302533.2657585/1‑94 (MQ=60)
CAGATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCA > SRR4302533.5082830/1‑94 (MQ=60)
AGATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAA < SRR4302533.2207284/94‑1 (MQ=60)
GATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAC > SRR4302533.5146259/1‑94 (MQ=60)
ATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACC < SRR4302533.712341/94‑1 (MQ=60)
ATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACC > SRR4302533.3824514/1‑94 (MQ=60)
ATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACC < SRR4302533.5532161/94‑1 (MQ=60)
ATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACC > SRR4302533.2135561/1‑94 (MQ=60)
TATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCC < SRR4302533.1383571/94‑1 (MQ=60)
ATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCG < SRR4302533.1097448/94‑1 (MQ=60)
AGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCA > SRR4302533.3459421/1‑94 (MQ=60)
AGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCA < SRR4302533.971370/94‑1 (MQ=60)
GTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATG < SRR4302533.4835238/94‑1 (MQ=60)
TATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGT > SRR4302533.6272044/1‑94 (MQ=60)
TATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTATGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGT < SRR4302533.4475531/94‑1 (MQ=60)
ATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATCAAGCAGCAACCCGCAATGTG > SRR4302533.488968/1‑94 (MQ=60)
ATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTG > SRR4302533.6011752/1‑94 (MQ=60)
ATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTG < SRR4302533.3349636/94‑1 (MQ=60)
TTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGT < SRR4302533.2496331/94‑1 (MQ=60)
ATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCG > SRR4302533.2428078/1‑94 (MQ=60)
TGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGA > SRR4302533.4741966/1‑94 (MQ=60)
TGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGA > SRR4302533.4213539/1‑94 (MQ=60)
ATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAAT > SRR4302533.5316381/1‑94 (MQ=60)
AGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTA > SRR4302533.4379097/1‑94 (MQ=60)
AGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTA > SRR4302533.4321070/1‑94 (MQ=60)
CCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATT > SRR4302533.2404852/1‑94 (MQ=60)
CATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTG < SRR4302533.4225403/94‑1 (MQ=60)
CATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTG < SRR4302533.5936636/94‑1 (MQ=60)
tgTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGG < SRR4302533.5220531/92‑1 (MQ=60)
ATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGG < SRR4302533.5987091/94‑1 (MQ=60)
TTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGC < SRR4302533.5557304/94‑1 (MQ=60)
TTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGC < SRR4302533.3812882/94‑1 (MQ=60)
TTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCA > SRR4302533.2894229/1‑94 (MQ=60)
TTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCA < SRR4302533.3442167/94‑1 (MQ=60)
TTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAA > SRR4302533.3995216/1‑94 (MQ=60)
AAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAA < SRR4302533.2740784/94‑1 (MQ=60)
AACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAG < SRR4302533.5062131/94‑1 (MQ=60)
AACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAG < SRR4302533.225900/94‑1 (MQ=60)
AACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAG > SRR4302533.729788/1‑94 (MQ=60)
CTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGC < SRR4302533.383450/94‑1 (MQ=60)
TATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCA > SRR4302533.560992/1‑94 (MQ=60)
GCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACC < SRR4302533.832914/94‑1 (MQ=60)
GCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACC < SRR4302533.209843/94‑1 (MQ=60)
GCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACC < SRR4302533.4344224/94‑1 (MQ=60)
GCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCAC < SRR4302533.5122385/94‑1 (MQ=60)
GCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCAC < SRR4302533.5278321/94‑1 (MQ=60)
CTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACA > SRR4302533.6202361/1‑94 (MQ=60)
CTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACA < SRR4302533.915444/94‑1 (MQ=60)
CTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACA < SRR4302533.745884/94‑1 (MQ=60)
TTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAG < SRR4302533.779009/94‑1 (MQ=60)
TTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAG > SRR4302533.2362998/1‑94 (MQ=60)
CGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGC < SRR4302533.1750656/94‑1 (MQ=60)
GTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCT < SRR4302533.4828540/94‑1 (MQ=60)
GTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCT > SRR4302533.1239956/1‑94 (MQ=60)
TTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTG < SRR4302533.1479660/94‑1 (MQ=60)
TGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCT > SRR4302533.1771215/1‑94 (MQ=60)
AGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTT < SRR4302533.5561705/94‑1 (MQ=60)
AGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTT > SRR4302533.396270/1‑94 (MQ=60)
GGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTT > SRR4302533.5374198/1‑94 (MQ=60)
TGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGTAAAAGGCAACCACAGGCTGCCTTTTTCTT > SRR4302533.4813858/1‑94 (MQ=60)
TGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTT > SRR4302533.7860/1‑94 (MQ=60)
GATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTT > SRR4302533.994184/1‑94 (MQ=60)
GATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTT > SRR4302533.2841061/1‑94 (MQ=60)
ATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTG > SRR4302533.3097682/1‑94 (MQ=60)
TGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGA > SRR4302533.4050897/1‑94 (MQ=60)
GTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGAC > SRR4302533.3655828/1‑94 (MQ=60)
GTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGAC < SRR4302533.1298059/94‑1 (MQ=60)
GTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGAC > SRR4302533.1046711/1‑94 (MQ=60)
TTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTC > SRR4302533.2601483/1‑94 (MQ=60)
GTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTA > SRR4302533.1335121/1‑94 (MQ=60)
GTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTA > SRR4302533.3876295/1‑94 (MQ=60)
TTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTAT > SRR4302533.632375/1‑94 (MQ=60)
TATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATG < SRR4302533.1545443/94‑1 (MQ=60)
TATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATG < SRR4302533.3896922/94‑1 (MQ=60)
ATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGA < SRR4302533.3491152/94‑1 (MQ=60)
TCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGAC < SRR4302533.847397/94‑1 (MQ=60)
TCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGAC < SRR4302533.4245656/94‑1 (MQ=60)
TCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGAC < SRR4302533.948295/94‑1 (MQ=60)
AGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGT > SRR4302533.74266/1‑94 (MQ=60)
AGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGT > SRR4302533.654433/1‑94 (MQ=60)
AGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGT > SRR4302533.45066/1‑94 (MQ=60)
CACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTA > SRR4302533.5670189/1‑94 (MQ=60)
CACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTA < SRR4302533.5326087/94‑1 (MQ=60)
TGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAA > SRR4302533.2896750/1‑94 (MQ=60)
TGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAA < SRR4302533.1793913/94‑1 (MQ=60)
TGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAA > SRR4302533.4255455/1‑94 (MQ=60)
GAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAA > SRR4302533.66014/1‑94 (MQ=60)
GAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAA > SRR4302533.5028181/1‑94 (MQ=60)
CGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTT < SRR4302533.5839337/94‑1 (MQ=60)
GAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTA < SRR4302533.4166914/94‑1 (MQ=60)
AAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAA < SRR4302533.1182421/94‑1 (MQ=60)
AAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAAT < SRR4302533.389404/94‑1 (MQ=60)
ATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATAT < SRR4302533.2562517/94‑1 (MQ=60)
ATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATAT < SRR4302533.5679885/94‑1 (MQ=60)
AAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGC < SRR4302533.6110007/94‑1 (MQ=60)
AAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGC < SRR4302533.1916675/94‑1 (MQ=60)
AAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGCG < SRR4302533.5857098/94‑1 (MQ=60)
AAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGCG < SRR4302533.5671130/94‑1 (MQ=60)
GCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGCGCG < SRR4302533.6332573/94‑1 (MQ=60)
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TCAGATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGTAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGCGCG > NC_000913/1145830‑1146012
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
