Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,148,033 |
A→G |
T18A (ACA→GCA) |
fabH → |
3‑oxoacyl‑[acyl‑carrier‑protein] synthase III |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,148,033 | 0 | A | G | 100.0%
| 652.3
/ NA
| 202 | T18A (ACA→GCA) | fabH | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase III |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (125/77); total (125/77) |
Only 100 of 213 total aligned reads displayed.
GCAAGTGACGGTATATAACCGAAAAGTGACTGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCA > NC_000913/1147943‑1148122
|
gCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCa > 2:2908632/1‑93 (MQ=255)
gCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCAAACAAGTGCGGGCa > 2:4621848/1‑93 (MQ=255)
cAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCaa > 2:5721614/1‑93 (MQ=255)
tGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGc < 2:3055320/93‑1 (MQ=255)
tGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGc > 2:4287003/1‑93 (MQ=255)
gACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGcc < 2:3673195/93‑1 (MQ=255)
aCGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCg > 2:2483869/1‑93 (MQ=255)
cGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGa > 2:5863075/1‑93 (MQ=255)
gTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGAtt > 2:1856302/1‑93 (MQ=255)
tatataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGAttt > 2:5574129/1‑93 (MQ=255)
atataACCGAAAAGTGACCGAGCTTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTg < 1:2689110/93‑1 (MQ=255)
tataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTgg < 2:727608/93‑1 (MQ=255)
tataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTgg > 1:4318867/1‑93 (MQ=255)
ataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGa > 2:3105279/1‑93 (MQ=255)
ataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGa < 2:4313641/93‑1 (MQ=255)
taACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaa < 1:1096942/93‑1 (MQ=255)
taACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaa < 2:6208430/93‑1 (MQ=255)
aCCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGACCAAGTGCGGGCAAACGCCGGTTTGGaaaa > 2:1572953/1‑93 (MQ=255)
aCCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaaaa > 2:5196803/1‑93 (MQ=255)
ccGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaaaaa < 2:2205416/93‑1 (MQ=255)
cGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaaaaaa > 2:2641301/1‑93 (MQ=255)
cGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaaaaaa > 1:4089640/1‑93 (MQ=255)
cGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaaaaaa > 1:1432649/1‑93 (MQ=255)
gAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAt < 1:5263664/93‑1 (MQ=255)
gAAAAGGGACCGAGCGTACATGTATACGAAAGTTATTGGCACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAGAt > 2:2257809/1‑93 (MQ=255)
aaaaGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAtg > 1:2601306/1‑93 (MQ=255)
aaaaGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAtg < 1:4923045/93‑1 (MQ=255)
aaGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAtggt > 1:3952604/1‑93 (MQ=255)
aaGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAtggt < 1:2553001/93‑1 (MQ=255)
aGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAtggtg < 2:6284716/93‑1 (MQ=255)
tGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGa > 1:2629009/1‑93 (MQ=255)
tGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGa < 1:1059775/93‑1 (MQ=255)
gACCGAGCGTCAATGGATACGAAGAATATTGGGAATTGCCGGTCTCTGCCCCAAACAGTGCGGGGAAACGCCGATTTGGAAAAAATGGTGGac > 2:4983934/1‑93 (MQ=255)
ccgAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGacac > 2:4708695/3‑93 (MQ=255)
cgAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACAcc > 1:94501/2‑93 (MQ=255)
aGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACctc > 2:4515126/1‑93 (MQ=255)
aGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACctc < 2:365095/93‑1 (MQ=255)
aGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACctc > 1:6044575/1‑93 (MQ=255)
gCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACctct < 2:5657088/93‑1 (MQ=255)
cGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTg > 1:1135206/1‑93 (MQ=255)
cGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAAGGTGGAAACctctt > 2:3245547/1‑92 (MQ=255)
tACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGAc < 1:5963354/93‑1 (MQ=255)
aCATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACg > 2:1891975/1‑93 (MQ=255)
aCATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACg > 1:3827897/1‑93 (MQ=255)
cATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACgg > 1:462224/1‑92 (MQ=255)
cATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGa < 2:6054251/93‑1 (MQ=255)
tGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGt > 2:3901585/1‑93 (MQ=255)
tGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGt < 2:1333004/93‑1 (MQ=255)
gTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTg < 1:559578/93‑1 (MQ=255)
gTAGACGAGGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATGTGGAAAAAATGGTGGACACCTCTGACGAGTg < 2:358199/93‑1 (MQ=255)
ataCGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGa > 1:2338516/1‑93 (MQ=255)
ataCGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGa < 1:2236877/93‑1 (MQ=255)
taCGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGAt > 2:1286794/1‑93 (MQ=255)
taCGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGAt > 1:2060578/1‑93 (MQ=255)
cGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTg > 1:514324/1‑93 (MQ=255)
cGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTg > 1:5896928/1‑93 (MQ=255)
gAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGt < 1:3139234/93‑1 (MQ=255)
gAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGt < 1:789513/93‑1 (MQ=255)
gAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGt > 1:4071439/1‑93 (MQ=255)
aGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCa < 2:1509753/93‑1 (MQ=255)
aGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCa < 1:5744843/93‑1 (MQ=255)
gATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCAc < 2:791421/93‑1 (MQ=255)
ttattGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTc > 2:4681952/1‑93 (MQ=255)
tattGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCg < 1:985148/93‑1 (MQ=255)
tattGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCg > 2:4964665/1‑93 (MQ=255)
tattGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCg > 2:4908799/1‑93 (MQ=255)
ttGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTa > 2:1139834/1‑93 (MQ=255)
tGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTAc > 1:364072/1‑93 (MQ=255)
ggTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTAcc > 2:1994307/1‑93 (MQ=255)
ggTACTGGCAGCTATCTACCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACCCCTCTGACGAGTGGATTGTCACTCGTAcc < 2:3792869/93‑1 (MQ=255)
gTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCg > 1:1556082/1‑93 (MQ=255)
gTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCg > 2:4942109/1‑93 (MQ=255)
gTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCg > 1:501210/1‑93 (MQ=255)
tACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCgg > 1:5391577/1‑93 (MQ=255)
cTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTAACGAGTGGATTGTCACTCGTACCGGTa < 1:6300117/93‑1 (MQ=255)
tGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTAt < 1:2027717/93‑1 (MQ=255)
ggCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATc < 1:2884021/93‑1 (MQ=255)
ggCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATc < 1:3740743/93‑1 (MQ=255)
ggCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATc > 2:2026941/1‑93 (MQ=255)
gCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATcc > 1:3345380/1‑93 (MQ=255)
gCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATcc > 2:6167763/1‑93 (MQ=255)
cAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCcg > 1:316867/1‑93 (MQ=255)
aGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCcgc < 2:4096934/93‑1 (MQ=255)
tATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGaa > 2:230757/1‑93 (MQ=255)
tATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGaa > 1:1212239/1‑93 (MQ=255)
tGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGcc > 1:6029993/1‑93 (MQ=255)
ccGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCcaca < 2:5295584/93‑1 (MQ=255)
cGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACAt > 1:4470079/1‑93 (MQ=255)
gAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACAtt < 2:5086209/93‑1 (MQ=255)
gAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACAtt < 2:5505673/93‑1 (MQ=255)
aaCAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACAttc > 1:1152928/1‑92 (MQ=255)
aaCAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTg > 2:822902/1‑93 (MQ=255)
aCAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGTACGCCACATTGc > 2:309022/1‑93 (MQ=255)
aCAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGc > 1:1270300/1‑93 (MQ=255)
cAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGcc > 1:449209/1‑93 (MQ=255)
aGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCcgc < 2:3196505/93‑1 (MQ=255)
tGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCgcgc > 1:3447740/1‑93 (MQ=255)
gCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGcc < 2:1793583/93‑1 (MQ=255)
cGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCa < 1:5447585/93‑1 (MQ=255)
cGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCa > 2:4211503/1‑93 (MQ=255)
|
GCAAGTGACGGTATATAACCGAAAAGTGACTGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCA > NC_000913/1147943‑1148122
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCAAGTGACGGTATATAACCGAAAAGTGACTGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCAAACG > NC_000913/1147942‑1148126
|
TGCAAGTGACGGGATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCA > SRR4302533.581712/1‑94 (MQ=60)
GTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGC > SRR4302533.3754095/1‑94 (MQ=60)
TGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCC > SRR4302533.485952/1‑94 (MQ=60)
GACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCG < SRR4302533.5446538/94‑1 (MQ=60)
CGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGAT > SRR4302533.2621094/1‑94 (MQ=60)
ATATAACCGAAAAGTGACCGAGCTTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGG < SRR4302533.2705595/94‑1 (MQ=60)
ATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGG > SRR4302533.4479200/1‑94 (MQ=60)
ATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGG > SRR4302533.4344880/1‑94 (MQ=60)
TATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGA < SRR4302533.113578/94‑1 (MQ=60)
ATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAA < SRR4302533.2649576/94‑1 (MQ=60)
TAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAA > SRR4302533.3176194/1‑94 (MQ=60)
TAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAA < SRR4302533.1103439/94‑1 (MQ=60)
AACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAA > SRR4302533.4634790/1‑94 (MQ=60)
CCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAA > SRR4302533.4114538/1‑94 (MQ=60)
CCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAA > SRR4302533.1441306/1‑94 (MQ=60)
CCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAA > SRR4302533.1238719/1‑94 (MQ=60)
GAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATG > SRR4302533.2617288/1‑94 (MQ=60)
GAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATG > SRR4302533.980004/1‑94 (MQ=60)
GAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATG < SRR4302533.5295260/94‑1 (MQ=60)
AAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGG < SRR4302533.4952870/94‑1 (MQ=60)
AAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGT > SRR4302533.3976706/1‑94 (MQ=60)
AAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTG < SRR4302533.2568710/94‑1 (MQ=60)
GTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGA > SRR4302533.2645163/1‑94 (MQ=60)
TGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGAC < SRR4302533.1066006/94‑1 (MQ=60)
TGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGAC > SRR4302533.5935265/1‑94 (MQ=60)
ACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACAC > SRR4302533.634422/1‑94 (MQ=60)
CCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACC > SRR4302533.95097/1‑94 (MQ=60)
CGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCT > SRR4302533.6187983/1‑94 (MQ=60)
GAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTC > SRR4302533.6081193/1‑94 (MQ=60)
GCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTG > SRR4302533.3857556/1‑94 (MQ=60)
GCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTG > SRR4302533.1141957/1‑94 (MQ=60)
GTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGAC > SRR4302533.4107795/1‑94 (MQ=60)
GTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGAC > SRR4302533.5344188/1‑94 (MQ=60)
GTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGAC > SRR4302533.5100580/1‑94 (MQ=60)
TACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACG < SRR4302533.5999430/94‑1 (MQ=60)
TACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACG > SRR4302533.3851299/1‑94 (MQ=60)
TACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACG > SRR4302533.2578474/1‑94 (MQ=60)
ACATGTATACTAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGA > SRR4302533.1080746/1‑94 (MQ=60)
ACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGG > SRR4302533.464982/1‑94 (MQ=60)
ACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGCGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGG > SRR4302533.833486/1‑94 (MQ=60)
ATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAATCGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGT > SRR4302533.5665606/1‑94 (MQ=60)
ATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGT > SRR4302533.1149528/1‑94 (MQ=60)
GTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGG < SRR4302533.562901/94‑1 (MQ=60)
TATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGA > SRR4302533.2352996/1‑94 (MQ=60)
ATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGAT < SRR4302533.2250705/94‑1 (MQ=60)
ATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGAT > SRR4302533.2073284/1‑94 (MQ=60)
TACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATT < SRR4302533.1786673/94‑1 (MQ=60)
ACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTG > SRR4302533.5932536/1‑94 (MQ=60)
ACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTG > SRR4302533.517381/1‑94 (MQ=60)
CGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGT > SRR4302533.4096225/1‑94 (MQ=60)
GAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTC > SRR4302533.3606475/1‑94 (MQ=60)
GAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTC < SRR4302533.794158/94‑1 (MQ=60)
GAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTC < SRR4302533.3158532/94‑1 (MQ=60)
AAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCA > SRR4302533.4260558/1‑94 (MQ=60)
AAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCA > SRR4302533.4500171/1‑94 (MQ=60)
AAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCA > SRR4302533.5177363/1‑94 (MQ=60)
AGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCAC < SRR4302533.5779507/94‑1 (MQ=60)
TATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGT < SRR4302533.990917/94‑1 (MQ=60)
ATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTA < SRR4302533.5038723/94‑1 (MQ=60)
TTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTAC < SRR4302533.2334224/94‑1 (MQ=60)
TTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTAC > SRR4302533.366281/1‑94 (MQ=60)
TGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACC < SRR4302533.2824119/94‑1 (MQ=60)
GGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCG > SRR4302533.1565448/1‑94 (MQ=60)
GGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCG > SRR4302533.3417713/1‑94 (MQ=60)
GGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCG > SRR4302533.504192/1‑94 (MQ=60)
GTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGG > SRR4302533.5423971/1‑94 (MQ=60)
TACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGT < SRR4302533.3873776/94‑1 (MQ=60)
CTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGGCACCTCTGACGAGTGGATTGTCACTCGTACCGGTAT < SRR4302533.4674563/94‑1 (MQ=60)
CTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTAACGAGTGGATTGTCACTCGTACCGGTAT < SRR4302533.6337737/94‑1 (MQ=60)
TGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATC < SRR4302533.2040235/94‑1 (MQ=60)
TGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATC < SRR4302533.205905/94‑1 (MQ=60)
GGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCC < SRR4302533.2901757/94‑1 (MQ=60)
GGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCC < SRR4302533.6014452/94‑1 (MQ=60)
GGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCC < SRR4302533.3763684/94‑1 (MQ=60)
GGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCC > SRR4302533.3366048/1‑94 (MQ=60)
GGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCC > SRR4302533.3319286/1‑94 (MQ=60)
GGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGATGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCC < SRR4302533.1319902/94‑1 (MQ=60)
GCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCG > SRR4302533.318807/1‑94 (MQ=60)
GCAGCTATCTGCCCAAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCG < SRR4302533.6071453/94‑1 (MQ=60)
CAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGC < SRR4302533.886414/94‑1 (MQ=60)
CAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGC > SRR4302533.3145850/1‑94 (MQ=60)
CTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAA > SRR4302533.1219531/1‑94 (MQ=60)
CTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAA < SRR4302533.1752813/94‑1 (MQ=60)
ATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACG < SRR4302533.1193379/94‑1 (MQ=60)
ATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACG > SRR4302533.3814277/1‑94 (MQ=60)
TCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGC < SRR4302533.2224516/94‑1 (MQ=60)
CTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCC > SRR4302533.6066538/1‑94 (MQ=60)
CCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACAT > SRR4302533.4497114/1‑94 (MQ=60)
CCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACAT > SRR4302533.1447005/1‑94 (MQ=60)
CGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATT > SRR4302533.5797441/1‑94 (MQ=60)
GAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTC > SRR4302533.1159831/1‑94 (MQ=60)
AACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGC > SRR4302533.1277900/1‑94 (MQ=60)
ACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCC > SRR4302533.451895/1‑94 (MQ=60)
ACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCC < SRR4302533.5587669/94‑1 (MQ=60)
AAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGC > SRR4302533.2839038/1‑94 (MQ=60)
AGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCG > SRR4302533.4090655/1‑94 (MQ=60)
GTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGC > SRR4302533.3469027/1‑94 (MQ=60)
TGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCC > SRR4302533.2360175/1‑94 (MQ=60)
CGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCAA > SRR4302533.276067/1‑94 (MQ=60)
CGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCAA < SRR4302533.5480403/94‑1 (MQ=60)
CGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCAA > SRR4302533.2129027/1‑94 (MQ=60)
CGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCAA > SRR4302533.4827228/1‑94 (MQ=60)
CGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGGATCCGCGAACGCCACATTGCCGCGCCAA > SRR4302533.5097159/1‑94 (MQ=60)
GGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCAAA < SRR4302533.780324/94‑1 (MQ=60)
GCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCAAACG > SRR4302533.1690669/1‑94 (MQ=60)
GCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCAAACG > SRR4302533.2067332/1‑94 (MQ=60)
GCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGGGGATTGTCACTCGTACCGGGAGCCGCGAACGCCCAATTGCCGCCCCAAACA > SRR4302533.1690670/1‑94 (MQ=60)
|
TGCAAGTGACGGTATATAACCGAAAAGTGACTGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCAAACG > NC_000913/1147942‑1148126
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
