Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,261,945 |
A→G |
R52R (CGT→CGC) |
ychB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,261,945 | 0 | A | G | 100.0%
| 650.8
/ NA
| 204 | R52R (CGT→CGC) | ychB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (117/87); total (117/87) |
Only 100 of 207 total aligned reads displayed.
CCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCAT > NC_000913/1261856‑1262033
|
ccGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGa > 2:3654786/1‑93 (MQ=255)
cTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAata < 2:231307/93‑1 (MQ=255)
cTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAata > 2:2221568/1‑93 (MQ=255)
tGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAatat < 1:3507163/93‑1 (MQ=255)
tGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAatat > 1:4666422/1‑93 (MQ=255)
tCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAatatgc > 2:2108877/1‑91 (MQ=255)
tGCCGCAGTTTTCATCAACAATCGCGCTGCGCGCACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATcccc > 2:807097/1‑93 (MQ=255)
tGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATcccc < 2:2103406/93‑1 (MQ=255)
tGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATcccc > 2:3383309/1‑93 (MQ=255)
tGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATcccc > 1:4608319/1‑93 (MQ=255)
cGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATc < 2:5214965/93‑1 (MQ=255)
gCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCg < 1:234324/93‑1 (MQ=255)
gCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCg < 1:2862582/93‑1 (MQ=255)
ttttCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCAc > 1:1746457/1‑93 (MQ=255)
ttttCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCAc > 1:4246925/1‑93 (MQ=255)
tttCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACg < 1:93374/93‑1 (MQ=255)
ttCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGa > 1:1077148/1‑93 (MQ=255)
tcatcaACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGaa < 1:140511/93‑1 (MQ=255)
caacaaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTc < 2:4504501/93‑1 (MQ=255)
caacaaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTc < 1:3080459/93‑1 (MQ=255)
aacaaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCa < 2:6092085/93‑1 (MQ=255)
acaaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCaa > 1:1611505/1‑93 (MQ=255)
caaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAAt < 2:3032855/93‑1 (MQ=255)
caaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAAt < 1:4267642/93‑1 (MQ=255)
aaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATg > 2:2709101/1‑93 (MQ=255)
aTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGc < 1:619462/93‑1 (MQ=255)
gcgcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGa < 1:148266/93‑1 (MQ=255)
gcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATg < 1:3341268/93‑1 (MQ=255)
gcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATg > 2:4828144/1‑93 (MQ=255)
gcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCACCATCGTCACGAAGCTCAATGCTGATg > 1:3612369/1‑93 (MQ=255)
cTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATgg > 1:5117199/1‑93 (MQ=255)
cTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATgg < 1:6097261/93‑1 (MQ=255)
cTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATgg < 2:377853/93‑1 (MQ=255)
cTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATgg > 2:10153/1‑93 (MQ=255)
cTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATgg < 2:6233241/93‑1 (MQ=255)
tGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGgt < 1:3755217/93‑1 (MQ=255)
tGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGgt > 2:5660594/1‑93 (MQ=255)
gcgAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTc > 2:5152290/1‑93 (MQ=255)
cgAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCg > 1:3562768/1‑93 (MQ=255)
gAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGAGTCGc > 2:2658730/1‑93 (MQ=255)
aTCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTaa > 2:773871/1‑93 (MQ=255)
aTCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCACCATCGTCACGAAGCTCGATGCTGATGGTGTCGCCGTaa > 1:845158/1‑93 (MQ=255)
tCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAAt > 2:3925112/1‑93 (MQ=255)
tCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAAt < 1:595224/93‑1 (MQ=255)
cAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATc < 2:3124797/93‑1 (MQ=255)
ggTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCaa < 1:4809440/93‑1 (MQ=255)
ttATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGa > 1:1934922/1‑93 (MQ=255)
tATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGaa > 2:1751596/1‑93 (MQ=255)
tATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGaa > 2:1346450/1‑93 (MQ=255)
tATCTTCATGTCCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGaa < 1:2484505/93‑1 (MQ=255)
tCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAAc > 2:5416322/1‑93 (MQ=255)
tCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAAc > 1:1692160/1‑93 (MQ=255)
cTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACt < 1:2157360/93‑1 (MQ=255)
cTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACt > 1:225097/1‑93 (MQ=255)
cTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACt > 1:3903250/1‑93 (MQ=255)
ttCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTg > 2:2808297/1‑93 (MQ=255)
ttCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTg < 1:120398/93‑1 (MQ=255)
ttCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTg < 2:2134493/93‑1 (MQ=255)
ttCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTg > 1:5430494/1‑93 (MQ=255)
ttCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTg < 2:1893166/93‑1 (MQ=255)
ttCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTg > 1:5245644/1‑93 (MQ=255)
cATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGaa > 2:836919/1‑93 (MQ=255)
cATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGaa < 2:780988/93‑1 (MQ=255)
tGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAAc > 2:35595/1‑93 (MQ=255)
gTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACa < 1:4498947/93‑1 (MQ=255)
ttCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAg > 1:110053/1‑93 (MQ=255)
ttCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAg > 2:260894/1‑93 (MQ=255)
ttCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAg > 1:2741929/1‑93 (MQ=255)
tCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGc < 1:3263214/93‑1 (MQ=255)
tCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGc > 2:715678/1‑93 (MQ=255)
tCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGc > 1:5633719/1‑93 (MQ=255)
tCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGc < 1:5093372/93‑1 (MQ=255)
ccACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCg > 2:5344477/1‑93 (MQ=255)
ccACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCg < 1:721771/93‑1 (MQ=255)
cACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGt > 2:2886364/1‑93 (MQ=255)
gCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTg > 2:4142088/1‑93 (MQ=255)
cTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCa > 2:1786238/1‑93 (MQ=255)
cTTCAACGGCCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCa < 1:2279742/93‑1 (MQ=255)
ttCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAg < 1:2709101/93‑1 (MQ=255)
tCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGc > 1:4543054/1‑93 (MQ=255)
tCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGc > 2:4531637/1‑93 (MQ=255)
tCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGc < 2:362671/93‑1 (MQ=255)
cAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCg < 2:5971863/93‑1 (MQ=255)
aaCGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgt > 1:2587176/1‑93 (MQ=255)
aaCGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgt < 1:4070280/93‑1 (MQ=255)
cGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgtgt < 2:385530/93‑1 (MQ=255)
cGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgtgt > 2:1587543/1‑93 (MQ=255)
gggCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGtgtg > 2:2542589/1‑93 (MQ=255)
gggCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGtgtg > 2:5628222/1‑93 (MQ=255)
gggCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGtgtg < 1:4319106/93‑1 (MQ=255)
gggCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGtgtg > 2:4923328/1‑93 (MQ=255)
gggCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGtgtg > 1:637124/1‑93 (MQ=255)
ggCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTgg > 1:897559/1‑93 (MQ=255)
gCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGt > 1:3628482/1‑93 (MQ=255)
gCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGt < 2:613094/93‑1 (MQ=255)
gCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGt < 2:3076131/93‑1 (MQ=255)
cGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTa < 1:6160485/93‑1 (MQ=255)
tAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAAcc > 2:5758226/1‑93 (MQ=255)
tAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAAcc < 1:3976283/93‑1 (MQ=255)
tAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAAcc < 1:2194832/93‑1 (MQ=255)
|
CCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCAT > NC_000913/1261856‑1262033
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATCCGC > NC_000913/1261853‑1262037
|
CGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGC > SRR4302533.1218408/1‑94 (MQ=60)
CGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGC < SRR4302533.1314048/94‑1 (MQ=60)
CCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAA > SRR4302533.3667727/1‑94 (MQ=60)
CGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAAT > SRR4302533.4439970/1‑94 (MQ=60)
CGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAAT > SRR4302533.2593141/1‑94 (MQ=60)
GCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATA > SRR4302533.4292263/1‑94 (MQ=60)
GCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATA < SRR4302533.3647103/94‑1 (MQ=60)
GCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATA > SRR4302533.1893511/1‑94 (MQ=60)
CTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATAT > SRR4302533.4694694/1‑94 (MQ=60)
CTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATAT < SRR4302533.3596997/94‑1 (MQ=60)
CTGTCTGCCGCAGTTTTCATCAACAATCGCGCGGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATAT < SRR4302533.425672/94‑1 (MQ=60)
CTGTCTGCCGCAGTTTTCATCAACAACCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATAT < SRR4302533.1100840/94‑1 (MQ=60)
TGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATC < SRR4302533.3528790/94‑1 (MQ=60)
GTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCC < SRR4302533.287859/94‑1 (MQ=60)
TCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCC > SRR4302533.2121302/1‑94 (MQ=60)
TCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCC > SRR4302533.5241855/1‑94 (MQ=60)
CTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCC > SRR4302533.4636227/1‑94 (MQ=60)
GCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCAT < SRR4302533.256220/94‑1 (MQ=60)
CCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATC > SRR4302533.2455961/1‑94 (MQ=60)
CGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCG < SRR4302533.902340/94‑1 (MQ=60)
GCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGT < SRR4302533.2880192/94‑1 (MQ=60)
GCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGT < SRR4302533.235771/94‑1 (MQ=60)
GCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATATTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGT > SRR4302533.2173584/1‑94 (MQ=60)
GTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCAC > SRR4302533.3183844/1‑94 (MQ=60)
GTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCAC > SRR4302533.1757080/1‑94 (MQ=60)
GTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCAC < SRR4302533.5042458/94‑1 (MQ=60)
GTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCAC > SRR4302533.4272559/1‑94 (MQ=60)
TTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGA < SRR4302533.93963/94‑1 (MQ=60)
TTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGA > SRR4302533.3975035/1‑94 (MQ=60)
TTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGA > SRR4302533.1083500/1‑94 (MQ=60)
TTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAA > SRR4302533.4000568/1‑94 (MQ=60)
TTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAA < SRR4302533.4573558/94‑1 (MQ=60)
TCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAG < SRR4302533.141407/94‑1 (MQ=60)
CATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGC < SRR4302533.1690907/94‑1 (MQ=60)
ATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCT < SRR4302533.4548681/94‑1 (MQ=60)
ATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCT > SRR4302533.3892099/1‑94 (MQ=60)
TCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTC > SRR4302533.6245755/1‑94 (MQ=60)
CAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCA < SRR4302533.3099358/94‑1 (MQ=60)
AACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAA < SRR4302533.683866/94‑1 (MQ=60)
AACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAA > SRR4302533.1621276/1‑94 (MQ=60)
CAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATG < SRR4302533.4293338/94‑1 (MQ=60)
ATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCT < SRR4302533.623100/94‑1 (MQ=60)
GCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGAT < SRR4302533.149215/94‑1 (MQ=60)
CGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCACCATCGTCACGAAGCTCAATGCTGATG > SRR4302533.3634601/1‑94 (MQ=60)
GCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGG > SRR4302533.5148123/1‑94 (MQ=60)
GCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGG < SRR4302533.3361919/94‑1 (MQ=60)
GCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGG < SRR4302533.5140779/94‑1 (MQ=60)
CTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGT < SRR4302533.6134086/94‑1 (MQ=60)
TGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTG < SRR4302533.3778233/94‑1 (MQ=60)
CGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTC > SRR4302533.2222173/1‑94 (MQ=60)
GCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCG > SRR4302533.1555856/1‑94 (MQ=60)
GCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCG > SRR4302533.6156340/1‑94 (MQ=60)
GCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCG > SRR4302533.3584719/1‑94 (MQ=60)
CGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGC > SRR4302533.4318160/1‑94 (MQ=60)
CGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGGTAACAGGCGAATATCCCCATCGTCCCGAAGCTGAATGCTGATGGTGCCGC > SRR4302533.3442336/1‑94 (MQ=60)
GAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCC < SRR4302533.59964/94‑1 (MQ=60)
GATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCACCATCGTCACGAAGCTCGATGCTGATGGTGTCGCCGTAA > SRR4302533.850102/1‑94 (MQ=60)
TCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATC < SRR4302533.598733/94‑1 (MQ=60)
CAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCA > SRR4302533.3284000/1‑94 (MQ=60)
CAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCA > SRR4302533.1201016/1‑94 (MQ=60)
GGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAG < SRR4302533.4838591/94‑1 (MQ=60)
GTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGA > SRR4302533.1946726/1‑94 (MQ=60)
TATCTTCATGTCCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAA < SRR4302533.2499816/94‑1 (MQ=60)
ATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAAC > SRR4302533.1473670/1‑94 (MQ=60)
ATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAAC > SRR4302533.1702410/1‑94 (MQ=60)
TCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACT > SRR4302533.3927090/1‑94 (MQ=60)
TCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACT > SRR4302533.226503/1‑94 (MQ=60)
CTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTG > SRR4302533.5277190/1‑94 (MQ=60)
CTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTG > SRR4302533.5463200/1‑94 (MQ=60)
CTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTG < SRR4302533.2170641/94‑1 (MQ=60)
CTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTG > SRR4302533.938513/1‑94 (MQ=60)
TTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGA < SRR4302533.121161/94‑1 (MQ=60)
TTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGA > SRR4302533.5592247/1‑94 (MQ=60)
TCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAA < SRR4302533.6210327/94‑1 (MQ=60)
TGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACA > SRR4302533.2291193/1‑94 (MQ=60)
GTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAG > SRR4302533.2758742/1‑94 (MQ=60)
GTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAG < SRR4302533.3561330/94‑1 (MQ=60)
GTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAG < SRR4302533.4526192/94‑1 (MQ=60)
GTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAG > SRR4302533.110751/1‑94 (MQ=60)
TTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGC > SRR4302533.5667787/1‑94 (MQ=60)
TCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCG < SRR4302533.2676027/94‑1 (MQ=60)
TCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCG < SRR4302533.5124141/94‑1 (MQ=60)
TCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCG < SRR4302533.3283344/94‑1 (MQ=60)
CCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGT > SRR4302533.4713825/1‑94 (MQ=60)
CCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGT > SRR4302533.5813459/1‑94 (MQ=60)
CCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGT < SRR4302533.726030/94‑1 (MQ=60)
ACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTT > SRR4302533.81291/1‑94 (MQ=60)
CGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTG > SRR4302533.2315945/1‑94 (MQ=60)
CTTCAACGGCCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAG < SRR4302533.2293859/94‑1 (MQ=60)
TTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGC > SRR4302533.4570566/1‑94 (MQ=60)
TTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGC < SRR4302533.2725725/94‑1 (MQ=60)
TTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGC < SRR4302533.2737740/94‑1 (MQ=60)
TCAACGGACGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCG < SRR4302533.1747565/94‑1 (MQ=60)
CAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGT > SRR4302533.2603081/1‑94 (MQ=60)
AACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTG > SRR4302533.983914/1‑94 (MQ=60)
AACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTG < SRR4302533.4639768/94‑1 (MQ=60)
AACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTG < SRR4302533.4095057/94‑1 (MQ=60)
ACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGT > SRR4302533.3052244/1‑94 (MQ=60)
CGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTG > SRR4302533.640873/1‑94 (MQ=60)
GGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGG > SRR4302533.4070734/1‑94 (MQ=60)
GGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGG < SRR4302533.4345121/94‑1 (MQ=60)
GGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGG > SRR4302533.902828/1‑94 (MQ=60)
GGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGT > SRR4302533.3650810/1‑94 (MQ=60)
GCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTA < SRR4302533.5448897/94‑1 (MQ=60)
CGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAA < SRR4302533.6197533/94‑1 (MQ=60)
GTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAAC > SRR4302533.1349909/1‑94 (MQ=60)
TAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCA < SRR4302533.4000491/94‑1 (MQ=60)
TAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCA < SRR4302533.2208356/94‑1 (MQ=60)
ACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATC < SRR4302533.5918273/94‑1 (MQ=60)
CAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATCC > SRR4302533.2774312/1‑94 (MQ=60)
AGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATCCG < SRR4302533.1364534/94‑1 (MQ=60)
GGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATCCGC > SRR4302533.62559/1‑94 (MQ=60)
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CGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATCCGC > NC_000913/1261853‑1262037
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
