Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,262,935 |
A→G |
intergenic (‑212/‑2) |
hemM ← / → hemA |
HemM/HemA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,262,935 | 0 | A | G | 100.0%
| 735.3
/ NA
| 227 | intergenic (‑212/‑2) | hemM/hemA | HemM/HemA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (131/96); total (131/96) |
Only 100 of 229 total aligned reads displayed.
CCAAAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATC > NC_000913/1262845‑1263024
|
aaaaGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATg < 2:1486922/93‑1 (MQ=255)
aaaaGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATg < 2:3151457/93‑1 (MQ=255)
aaaGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGa < 1:2041485/93‑1 (MQ=255)
aaaGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGa > 2:5777788/1‑93 (MQ=255)
aaaGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGa > 1:2692493/1‑93 (MQ=255)
aGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGAcc > 1:4610676/1‑93 (MQ=255)
gggggCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGAccc > 2:2965711/1‑93 (MQ=255)
gggggCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGAccc > 1:5079048/1‑93 (MQ=255)
ggCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCttt > 1:90666/1‑93 (MQ=255)
cgcTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTa < 1:3562135/93‑1 (MQ=255)
gcTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTat > 1:6257754/1‑92 (MQ=255)
ctctctTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGc > 1:3773082/1‑93 (MQ=255)
ctctctTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGc > 1:4046248/1‑93 (MQ=255)
ctctctTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGc < 2:5893873/93‑1 (MQ=255)
tctctTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCa > 2:3228057/1‑93 (MQ=255)
ctTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTc < 2:6024415/93‑1 (MQ=255)
ttttATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCg > 2:6261140/1‑93 (MQ=255)
tttATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCgg > 1:3153812/1‑93 (MQ=255)
tttATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACACgg > 1:816712/1‑93 (MQ=255)
tATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTa > 1:6036656/1‑93 (MQ=255)
tATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTa > 1:6271475/1‑93 (MQ=255)
tATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTa < 2:2098936/93‑1 (MQ=255)
tATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTa > 2:3568282/1‑93 (MQ=255)
ttGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATc < 1:1504973/93‑1 (MQ=255)
ttGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATc > 1:1619263/1‑93 (MQ=255)
ttGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATc > 2:2795031/1‑93 (MQ=255)
tGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCa > 1:2736458/1‑93 (MQ=255)
gATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCaa < 1:191508/93‑1 (MQ=255)
gATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCaa < 1:1677659/93‑1 (MQ=255)
aTCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAAc < 2:623238/93‑1 (MQ=255)
aTCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAAc > 2:100107/1‑93 (MQ=255)
aTCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAAc > 1:5966422/1‑93 (MQ=255)
tCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAAcc > 2:717321/1‑93 (MQ=255)
cTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCa > 2:1177868/1‑93 (MQ=255)
cTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCa < 1:5798302/93‑1 (MQ=255)
cTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCa > 1:6150918/1‑93 (MQ=255)
ttACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCAt > 1:2810865/1‑93 (MQ=255)
ttACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCAt > 1:2847560/1‑93 (MQ=255)
tACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATa < 2:3957432/93‑1 (MQ=255)
aCGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTTGGTATCAACCATaa < 1:2906723/93‑1 (MQ=255)
gCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATaaaa < 1:5437712/93‑1 (MQ=255)
gCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATaaaa > 2:418207/1‑93 (MQ=255)
aTCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACg < 1:501517/93‑1 (MQ=255)
tCCTGTATGATGCGAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACgg > 2:2027904/1‑93 (MQ=255)
tCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACgg > 1:5220403/1‑93 (MQ=255)
ccTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGc > 1:874770/1‑93 (MQ=255)
ccTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGc < 1:4100090/93‑1 (MQ=255)
tGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCAc > 2:362026/1‑93 (MQ=255)
gTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCAcc > 1:3291704/1‑93 (MQ=255)
atgatgCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTg > 2:1423020/1‑93 (MQ=255)
tgatgCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGt > 1:2702427/1‑93 (MQ=255)
tgatgCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGt < 2:6178963/93‑1 (MQ=255)
gatgCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTa < 2:2336874/93‑1 (MQ=255)
atgCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTAt > 1:1864645/1‑93 (MQ=255)
cAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGc < 2:4957002/93‑1 (MQ=255)
aGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTg > 2:4498756/1‑93 (MQ=255)
aGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTg > 1:1103578/1‑93 (MQ=255)
gCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGc < 2:387685/93‑1 (MQ=255)
gCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCGGTATCGCTGc < 1:4731182/93‑1 (MQ=255)
cAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCg < 2:2257606/93‑1 (MQ=255)
cAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCg < 2:2673900/93‑1 (MQ=255)
gACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCgag > 1:1770731/1‑93 (MQ=255)
gACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCgag > 2:5362963/1‑93 (MQ=255)
gACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCAATCGGTATCAACCATAAAACGGCACCTGTATCGCTGCgag > 2:165162/1‑93 (MQ=255)
cTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGaa < 1:5640909/93‑1 (MQ=255)
tAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAAc > 2:4739614/1‑93 (MQ=255)
aaCCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACg > 2:609041/1‑93 (MQ=255)
aCCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATACAACGGCACCTGTATCGCTGCGAGAACgc > 2:1827019/1‑92 (MQ=255)
cccTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACgtg > 2:3116594/1‑93 (MQ=255)
cccTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACgtg > 2:4425999/1‑93 (MQ=255)
ccTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACgtgt > 2:5189033/1‑93 (MQ=255)
cTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTa < 1:6064036/93‑1 (MQ=255)
cTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTa < 2:2463852/93‑1 (MQ=255)
tATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTAt > 1:4576673/1‑93 (MQ=255)
tATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTAt < 2:817835/93‑1 (MQ=255)
tATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTAt > 2:4044542/1‑93 (MQ=255)
aaCGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGtt > 2:4307093/1‑93 (MQ=255)
cGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGtttt < 2:127135/93‑1 (MQ=255)
gTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTc > 2:4988344/1‑93 (MQ=255)
gTTCGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTc < 2:2857357/93‑1 (MQ=255)
ttGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCg > 2:3521918/1‑93 (MQ=255)
ttGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCg > 1:2353242/1‑93 (MQ=255)
ttGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCg > 2:2585561/1‑93 (MQ=255)
tGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGc < 1:1233048/93‑1 (MQ=255)
tGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGc > 2:3000810/1‑93 (MQ=255)
tGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGc > 1:2539962/1‑93 (MQ=255)
gTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCg > 2:5672996/1‑93 (MQ=255)
attattTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGa > 2:4881258/1‑93 (MQ=255)
attattTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGa > 2:59860/1‑93 (MQ=255)
attattTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGa > 1:2178020/1‑93 (MQ=255)
tattTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATa > 2:3524975/1‑93 (MQ=255)
tattTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATa < 2:217684/93‑1 (MQ=255)
tattTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATa > 2:2039438/1‑93 (MQ=255)
tattTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATa > 2:1250981/1‑93 (MQ=255)
tattTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATa < 1:4863723/93‑1 (MQ=255)
ttCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGc < 1:3926146/93‑1 (MQ=255)
gCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAAt < 2:4791269/93‑1 (MQ=255)
cAGGCATGACCCTTTTAGCACTCGGTATCAACCATCAAACGGCACCTGTATCGCTGCGAGGACGTGTATCGTTTTCGCCGGATAAGCTCAATc > 2:2630118/1‑93 (MQ=255)
cAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAATc < 2:5722299/93‑1 (MQ=255)
cAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAATc < 2:895791/93‑1 (MQ=255)
|
CCAAAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATC > NC_000913/1262845‑1263024
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACTCCAAAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGC > NC_000913/1262842‑1263028
|
ACTCCAAAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGG < SRR4302533.1107232/94‑1 (MQ=60)
CTCCAAAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGC > SRR4302533.4372106/1‑94 (MQ=60)
CTCCAAAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGC > SRR4302533.2571052/1‑94 (MQ=60)
CTCCAAAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGC < SRR4302533.4298415/94‑1 (MQ=60)
CTCCAAAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGC > SRR4302533.4044162/1‑94 (MQ=60)
TCCAAAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCA > SRR4302533.822625/1‑94 (MQ=60)
AAAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGA > SRR4302533.2708994/1‑94 (MQ=60)
AAAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGA < SRR4302533.1540573/94‑1 (MQ=60)
AAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGAC < SRR4302533.2054066/94‑1 (MQ=60)
AAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGAC > SRR4302533.1854864/1‑94 (MQ=60)
AAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACC > SRR4302533.4638602/1‑94 (MQ=60)
AGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCC > SRR4302533.5109745/1‑94 (MQ=60)
GGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTT > SRR4302533.91240/1‑94 (MQ=60)
GGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTT < SRR4302533.3775268/94‑1 (MQ=60)
GGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTT < SRR4302533.5814248/94‑1 (MQ=60)
GCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTA < SRR4302533.4877675/94‑1 (MQ=60)
GCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTA < SRR4302533.1674935/94‑1 (MQ=60)
GCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTA < SRR4302533.4049442/94‑1 (MQ=60)
GGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAG < SRR4302533.2972578/94‑1 (MQ=60)
CGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAT > SRR4302533.6295176/1‑94 (MQ=60)
CGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAG < SRR4302533.3584082/94‑1 (MQ=60)
CGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAG > SRR4302533.3310945/1‑94 (MQ=60)
GCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGC > SRR4302533.4070876/1‑94 (MQ=60)
GCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGC > SRR4302533.3796211/1‑94 (MQ=60)
CTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACT < SRR4302533.2722248/94‑1 (MQ=60)
TCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTC < SRR4302533.3756560/94‑1 (MQ=60)
TTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGG > SRR4302533.3173200/1‑94 (MQ=60)
TTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACACGG > SRR4302533.821498/1‑94 (MQ=60)
TTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTA > SRR4302533.6308936/1‑94 (MQ=60)
TTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTA > SRR4302533.6073238/1‑94 (MQ=60)
TATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTAT > SRR4302533.6186027/1‑94 (MQ=60)
TATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTAT < SRR4302533.3164753/94‑1 (MQ=60)
TATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTAT < SRR4302533.6079832/94‑1 (MQ=60)
ATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATC > SRR4302533.1629072/1‑94 (MQ=60)
TTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCA < SRR4302533.1514051/94‑1 (MQ=60)
TTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCA > SRR4302533.2753243/1‑94 (MQ=60)
TGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAA > SRR4302533.286833/1‑94 (MQ=60)
GATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAAC > SRR4302533.6002539/1‑94 (MQ=60)
GATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAAC > SRR4302533.6002537/1‑94 (MQ=60)
GATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAAC < SRR4302533.1687818/94‑1 (MQ=60)
GATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAAC < SRR4302533.192711/94‑1 (MQ=60)
ATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACC > SRR4302533.907978/1‑94 (MQ=60)
ATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACC < SRR4302533.2323823/94‑1 (MQ=60)
TCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCA > SRR4302533.6187939/1‑94 (MQ=60)
CTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCAT > SRR4302533.2828162/1‑94 (MQ=60)
CTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCAT < SRR4302533.5833333/94‑1 (MQ=60)
CTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCAT > SRR4302533.2865082/1‑94 (MQ=60)
TACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAA < SRR4302533.2186879/94‑1 (MQ=60)
ACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTTGGTATCAACCATAAA < SRR4302533.2924571/94‑1 (MQ=60)
GCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAAC < SRR4302533.5470464/94‑1 (MQ=60)
GCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAAC < SRR4302533.5926076/94‑1 (MQ=60)
CATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACG > SRR4302533.918190/1‑94 (MQ=60)
ATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGG > SRR4302533.5351229/1‑94 (MQ=60)
ATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGG < SRR4302533.504499/94‑1 (MQ=60)
ATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGG > SRR4302533.4539689/1‑94 (MQ=60)
ATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGG > SRR4302533.1975124/1‑94 (MQ=60)
ATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGG > SRR4302533.5251820/1‑94 (MQ=60)
TCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGC > SRR4302533.879905/1‑94 (MQ=60)
TCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGC > SRR4302533.6189009/1‑94 (MQ=60)
CCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCA < SRR4302533.4125042/94‑1 (MQ=60)
CCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCA > SRR4302533.6137718/1‑94 (MQ=60)
CCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGGATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCA > SRR4302533.4756431/1‑94 (MQ=60)
TGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACC > SRR4302533.118427/1‑94 (MQ=60)
TGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACC < SRR4302533.5885853/94‑1 (MQ=60)
TGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACC > SRR4302533.3312023/1‑94 (MQ=60)
GTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCT > SRR4302533.869648/1‑94 (MQ=60)
GTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCT > SRR4302533.1683582/1‑94 (MQ=60)
TATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTG > SRR4302533.2709578/1‑94 (MQ=60)
ATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGT > SRR4302533.2719004/1‑94 (MQ=60)
GATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTAT > SRR4302533.4820301/1‑94 (MQ=60)
GATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTAT > SRR4302533.1876020/1‑94 (MQ=60)
TGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCG > SRR4302533.2856320/1‑94 (MQ=60)
TGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCG < SRR4302533.2407224/94‑1 (MQ=60)
CAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCT > SRR4302533.5351152/1‑94 (MQ=60)
AAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTG > SRR4302533.1110112/1‑94 (MQ=60)
GCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCGGTATCGCTGCG < SRR4302533.4759866/94‑1 (MQ=60)
AGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCTTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAG > SRR4302533.5515971/1‑94 (MQ=60)
AGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAG > SRR4302533.1781512/1‑94 (MQ=60)
ACTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAA > SRR4302533.50604/1‑94 (MQ=60)
CTAACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAAC < SRR4302533.5675005/94‑1 (MQ=60)
ACCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTG > SRR4302533.2824570/1‑94 (MQ=60)
CCCTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGT < SRR4302533.4330128/94‑1 (MQ=60)
CTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTAT < SRR4302533.6100743/94‑1 (MQ=60)
CTATCAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTAT > SRR4302533.4604411/1‑94 (MQ=60)
CAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTT < SRR4302533.2752417/94‑1 (MQ=60)
CAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTT < SRR4302533.1919104/94‑1 (MQ=60)
CAACGTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTT < SRR4302533.1693136/94‑1 (MQ=60)
GTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCG > SRR4302533.6318358/1‑94 (MQ=60)
GTTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCG > SRR4302533.2367796/1‑94 (MQ=60)
TTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGC > SRR4302533.5152260/1‑94 (MQ=60)
TTGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGC > SRR4302533.2555597/1‑94 (MQ=60)
TGGTATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCC < SRR4302533.1240426/94‑1 (MQ=60)
TATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGA > SRR4302533.2191447/1‑94 (MQ=60)
ATTATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGAT < SRR4302533.4111206/94‑1 (MQ=60)
TATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAA < SRR4302533.4893197/94‑1 (MQ=60)
ATTTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAG > SRR4302533.2628489/1‑94 (MQ=60)
TTCCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCT < SRR4302533.3950116/94‑1 (MQ=60)
CCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCA > SRR4302533.4973535/1‑94 (MQ=60)
CCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCA > SRR4302533.1397849/1‑94 (MQ=60)
CCCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCA < SRR4302533.6298326/94‑1 (MQ=60)
CCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAA > SRR4302533.1893358/1‑94 (MQ=60)
CCGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAA < SRR4302533.3315824/94‑1 (MQ=60)
CGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAAT < SRR4302533.2409191/94‑1 (MQ=60)
CGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAAT < SRR4302533.3874848/94‑1 (MQ=60)
CGCAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAAT < SRR4302533.463313/94‑1 (MQ=60)
CAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAATCA > SRR4302533.5061594/1‑94 (MQ=60)
CAGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAATCA > SRR4302533.132962/1‑94 (MQ=60)
AGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAATCAG > SRR4302533.2424188/1‑94 (MQ=60)
AGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAATCAG > SRR4302533.4093042/1‑94 (MQ=60)
AGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAATCAG < SRR4302533.770401/94‑1 (MQ=60)
AGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAATCAG > SRR4302533.4681916/1‑94 (MQ=60)
AGGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAATCAG < SRR4302533.272045/94‑1 (MQ=60)
GGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAATCAGG < SRR4302533.4002545/94‑1 (MQ=60)
GGCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAATCAGG < SRR4302533.1488905/94‑1 (MQ=60)
GCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCAATCAGGC > SRR4302533.6291789/1‑94 (MQ=60)
|
ACTCCAAAAGGGGGCGCTCTCTTTTATTGATCTTACGCATCCTGTATGATGCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGC > NC_000913/1262842‑1263028
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
