Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,273,390 |
T→C |
R81R (CGT→CGC) |
ychP → |
putative factor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,273,390 | 0 | T | C | 100.0%
| 638.8
/ NA
| 199 | R81R (CGT→CGC) | ychP | putative factor |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (88/111); total (88/111) |
Only 100 of 204 total aligned reads displayed.
TAATCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGTGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAG > NC_000913/1273300‑1273479
|
tAATCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCgg < 1:512536/93‑1 (MQ=255)
aTCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGaa < 2:1275249/93‑1 (MQ=255)
tCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAg > 1:4607739/1‑93 (MQ=255)
tCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAg < 1:378485/93‑1 (MQ=255)
gCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTg < 1:4978891/93‑1 (MQ=255)
cACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTgg < 2:745701/93‑1 (MQ=255)
cGTAGAGTCCTGGCTATCACCGTGGGTAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGtt < 1:1902956/93‑1 (MQ=255)
cGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGtt < 2:3769126/93‑1 (MQ=255)
cGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGtt < 2:2117947/93‑1 (MQ=255)
gTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGttt < 1:1747286/93‑1 (MQ=255)
tAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTtg > 2:2508620/1‑93 (MQ=255)
tAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTtg > 1:6226773/1‑93 (MQ=255)
agagTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGGGGAAGCTGGttttg > 2:167258/1‑91 (MQ=255)
agagTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTtgt > 1:6009375/1‑93 (MQ=255)
agTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGc < 1:875384/93‑1 (MQ=255)
agTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGc > 1:2763917/1‑93 (MQ=255)
gTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGcc > 2:5947210/1‑93 (MQ=255)
gTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGcc > 2:1926690/1‑93 (MQ=255)
gTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGCTTGTGcc > 1:2169493/1‑93 (MQ=255)
tCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCg < 2:5918742/93‑1 (MQ=255)
tCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCg < 1:1849646/93‑1 (MQ=255)
cTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGtt > 1:3637048/1‑93 (MQ=255)
ggCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTAc < 2:4953613/93‑1 (MQ=255)
cTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACaa < 2:4600854/93‑1 (MQ=255)
cTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACaa > 2:2999878/1‑93 (MQ=255)
tATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGGCGTTACAAg > 2:381021/1‑93 (MQ=255)
tATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAg > 2:3186178/1‑93 (MQ=255)
aTCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGa > 2:3205444/1‑93 (MQ=255)
tCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGAt < 1:4809410/93‑1 (MQ=255)
cACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATa < 1:455634/93‑1 (MQ=255)
cACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATa > 2:1084194/1‑93 (MQ=255)
cACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATGTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATa < 1:4434271/93‑1 (MQ=255)
ccGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAAt < 2:5385650/93‑1 (MQ=255)
ccGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAAt > 2:4385355/1‑93 (MQ=255)
ccGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAAt < 1:3962146/93‑1 (MQ=255)
cGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATg < 2:3375945/93‑1 (MQ=255)
cGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATg < 1:2028284/93‑1 (MQ=255)
gTGGGGAAATTCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGa < 2:1960314/93‑1 (MQ=255)
gTGGGGAAATGCCAGTGTTGACGTCAAAGTGTATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGa < 2:3524595/93‑1 (MQ=255)
gTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGa < 1:4733351/93‑1 (MQ=255)
ggggAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATc < 2:3327963/93‑1 (MQ=255)
ggggAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATc < 1:1201345/93‑1 (MQ=255)
ggggAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATc < 2:5107571/93‑1 (MQ=255)
ggggAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATc < 2:4828713/93‑1 (MQ=255)
ggggAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATc < 2:3697354/93‑1 (MQ=255)
ggggAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATc > 1:3095197/1‑93 (MQ=255)
gggAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCg > 1:5005257/1‑93 (MQ=255)
ggAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGt < 1:100224/93‑1 (MQ=255)
gAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGtt < 1:4655238/93‑1 (MQ=255)
aaTGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTAt < 1:1691249/93‑1 (MQ=255)
aTGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTAtc < 1:5220473/93‑1 (MQ=255)
gCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTAtctc > 1:2433394/1‑93 (MQ=255)
ccAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCa > 1:5137190/1‑93 (MQ=255)
ccAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCa < 1:1236840/93‑1 (MQ=255)
cAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCAc < 1:3192517/93‑1 (MQ=255)
gtgtTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCt < 2:1843212/93‑1 (MQ=255)
gtTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTgg < 2:1978245/93‑1 (MQ=255)
ttGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGa < 2:1034575/93‑1 (MQ=255)
gACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGc > 1:1353472/1‑93 (MQ=255)
aCGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGcc > 1:5869733/1‑93 (MQ=255)
cGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCa > 1:5823109/1‑93 (MQ=255)
cGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCa < 1:4527364/93‑1 (MQ=255)
tCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGc < 2:2323428/93‑1 (MQ=255)
cAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCt < 1:3677372/93‑1 (MQ=255)
aaaGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCtt > 2:2098553/1‑93 (MQ=255)
aaaGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCtt < 2:2574345/93‑1 (MQ=255)
aaGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTg < 2:4729680/93‑1 (MQ=255)
aaGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTg < 2:5567322/93‑1 (MQ=255)
gTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGt < 1:5461554/93‑1 (MQ=255)
gTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGt < 1:653362/93‑1 (MQ=255)
tAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTAc > 2:6122392/1‑93 (MQ=255)
aCGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTc < 2:863459/93‑1 (MQ=255)
cGAAGTACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTca < 2:5427844/93‑1 (MQ=255)
cGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTca > 1:3014391/1‑93 (MQ=255)
gAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTcag > 1:4668636/1‑93 (MQ=255)
aaGGACGTTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTcagc > 1:2579852/1‑93 (MQ=255)
aGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTcagca < 2:2363263/93‑1 (MQ=255)
aGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTcagca < 2:4324708/93‑1 (MQ=255)
gACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAgg < 2:1511400/93‑1 (MQ=255)
cATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGAt < 1:1719354/93‑1 (MQ=255)
cATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGAt < 2:5611046/93‑1 (MQ=255)
aTTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATa > 1:2344766/1‑93 (MQ=255)
tttCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATaa > 2:5694947/1‑93 (MQ=255)
aCCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGGGCCAGCTTGGTCTTACTCAGCAGGATAATggg < 2:6027499/93‑1 (MQ=255)
aCCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATggg > 2:5573887/1‑93 (MQ=255)
ccGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGt < 1:2782302/93‑1 (MQ=255)
ggCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTg < 2:6257833/93‑1 (MQ=255)
gCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTgg < 1:1075205/93‑1 (MQ=255)
gCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTgg < 2:3586906/93‑1 (MQ=255)
gCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTgg < 2:4209546/93‑1 (MQ=255)
gCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGGTgg > 2:3844628/1‑93 (MQ=255)
cAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGt < 1:1294961/93‑1 (MQ=255)
aGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTg > 2:6205306/1‑93 (MQ=255)
gTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGa > 1:6128955/1‑93 (MQ=255)
gTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGa < 2:4068436/93‑1 (MQ=255)
gTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGa > 2:477854/1‑93 (MQ=255)
gTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGa < 1:1499627/93‑1 (MQ=255)
gTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGa > 2:4241865/1‑93 (MQ=255)
gTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGa > 2:4428995/1‑93 (MQ=255)
tCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGGTGGTGAg > 2:2700/1‑93 (MQ=255)
|
TAATCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGTGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAG > NC_000913/1273300‑1273479
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAATCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGTGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAGCAAT > NC_000913/1273300‑1273483
|
TAATCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGA < SRR4302533.515581/94‑1 (MQ=60)
ATCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAG > SRR4302533.4635647/1‑94 (MQ=60)
TCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGC < SRR4302533.380765/94‑1 (MQ=60)
CAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCT < SRR4302533.5886992/94‑1 (MQ=60)
CAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCT < SRR4302533.5247219/94‑1 (MQ=60)
AGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTG < SRR4302533.645246/94‑1 (MQ=60)
AGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTG < SRR4302533.3693771/94‑1 (MQ=60)
GCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGG < SRR4302533.5009080/94‑1 (MQ=60)
GCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGG < SRR4302533.1513200/94‑1 (MQ=60)
ACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTT < SRR4302533.2151879/94‑1 (MQ=60)
CGTAGAGTCCTGGCTATCACCGTGGGTAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTT < SRR4302533.1914570/94‑1 (MQ=60)
CGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTT < SRR4302533.486741/94‑1 (MQ=60)
CGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTT > SRR4302533.4679824/1‑94 (MQ=60)
GTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTG > SRR4302533.6082032/1‑94 (MQ=60)
GTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTG > SRR4302533.6264076/1‑94 (MQ=60)
GTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTG > SRR4302533.3764786/1‑94 (MQ=60)
GTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTG < SRR4302533.1757920/94‑1 (MQ=60)
TAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGT > SRR4302533.6045782/1‑94 (MQ=60)
TAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGT > SRR4302533.4556141/1‑94 (MQ=60)
GAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGC > SRR4302533.2780862/1‑94 (MQ=60)
AGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCC > SRR4302533.4140776/1‑94 (MQ=60)
AGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCC < SRR4302533.880524/94‑1 (MQ=60)
AGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGCTTGTGCC > SRR4302533.2182837/1‑94 (MQ=60)
TCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGT < SRR4302533.1860928/94‑1 (MQ=60)
TCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGT < SRR4302533.4721195/94‑1 (MQ=60)
CCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTT > SRR4302533.3659410/1‑94 (MQ=60)
GGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACA < SRR4302533.5009522/94‑1 (MQ=60)
GGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACA < SRR4302533.3069289/94‑1 (MQ=60)
GGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACA < SRR4302533.1762971/94‑1 (MQ=60)
TATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGA > SRR4302533.4819581/1‑94 (MQ=60)
ATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGAT < SRR4302533.5389076/94‑1 (MQ=60)
TCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATA < SRR4302533.4838561/94‑1 (MQ=60)
CACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAA > SRR4302533.2005688/1‑94 (MQ=60)
CACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAA < SRR4302533.458359/94‑1 (MQ=60)
CACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATGTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAA < SRR4302533.4461079/94‑1 (MQ=60)
CCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATG < SRR4302533.3986285/94‑1 (MQ=60)
CGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGA < SRR4302533.2040805/94‑1 (MQ=60)
CGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGA > SRR4302533.1014463/1‑94 (MQ=60)
CGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGA > SRR4302533.5164620/1‑94 (MQ=60)
GTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGAT < SRR4302533.4762046/94‑1 (MQ=60)
GTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGAT > SRR4302533.4691349/1‑94 (MQ=60)
TGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATC > SRR4302533.3114225/1‑94 (MQ=60)
TGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATC < SRR4302533.4505222/94‑1 (MQ=60)
GGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCG > SRR4302533.5035590/1‑94 (MQ=60)
GGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCG < SRR4302533.1208562/94‑1 (MQ=60)
GGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCG > SRR4302533.1274970/1‑94 (MQ=60)
GGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCG > SRR4302533.1505132/1‑94 (MQ=60)
GGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCG < SRR4302533.1210163/94‑1 (MQ=60)
GGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTT < SRR4302533.100850/94‑1 (MQ=60)
GGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTT < SRR4302533.1890559/94‑1 (MQ=60)
GAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTA < SRR4302533.4683449/94‑1 (MQ=60)
AATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATC < SRR4302533.2567878/94‑1 (MQ=60)
AATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATC < SRR4302533.1701493/94‑1 (MQ=60)
ATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCT < SRR4302533.5251891/94‑1 (MQ=60)
ATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCT > SRR4302533.460222/1‑94 (MQ=60)
TGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTC > SRR4302533.2448429/1‑94 (MQ=60)
GCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCA > SRR4302533.5168233/1‑94 (MQ=60)
CCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCAC < SRR4302533.1244231/94‑1 (MQ=60)
CAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACC < SRR4302533.3212156/94‑1 (MQ=60)
TGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGC > SRR4302533.1361609/1‑94 (MQ=60)
GACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCC > SRR4302533.5905212/1‑94 (MQ=60)
ACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCA > SRR4302533.5858281/1‑94 (MQ=60)
CGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAG < SRR4302533.4554776/94‑1 (MQ=60)
CAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTT < SRR4302533.3699974/94‑1 (MQ=60)
GTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTC < SRR4302533.5494456/94‑1 (MQ=60)
GTGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTC < SRR4302533.657220/94‑1 (MQ=60)
TGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCT < SRR4302533.3295888/94‑1 (MQ=60)
TGGATAACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCT > SRR4302533.1717301/1‑94 (MQ=60)
ACGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCA > SRR4302533.3032826/1‑94 (MQ=60)
CGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAG > SRR4302533.4696926/1‑94 (MQ=60)
CGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAG > SRR4302533.2792066/1‑94 (MQ=60)
CGAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAG < SRR4302533.2387264/94‑1 (MQ=60)
GAAGGACGTTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGC > SRR4302533.2595728/1‑94 (MQ=60)
GAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGC > SRR4302533.2663706/1‑94 (MQ=60)
GAAGGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGC < SRR4302533.3204104/94‑1 (MQ=60)
GGACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGG < SRR4302533.5076677/94‑1 (MQ=60)
GACATTTCACCGGCAGTCGCTTAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCCCCTGGAGCCAGCTTGGTCTTACTCAGCAGGA < SRR4302533.2996211/94‑1 (MQ=60)
GACATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGA < SRR4302533.1154455/94‑1 (MQ=60)
CATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATA > SRR4302533.2359277/1‑94 (MQ=60)
CATTTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATA < SRR4302533.1729779/94‑1 (MQ=60)
TTCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATG < SRR4302533.5970981/94‑1 (MQ=60)
TCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGG > SRR4302533.1747417/1‑94 (MQ=60)
TCACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGG < SRR4302533.79115/94‑1 (MQ=60)
CACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGG < SRR4302533.5847495/94‑1 (MQ=60)
CACCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGG > SRR4302533.2297285/1‑94 (MQ=60)
CCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTT < SRR4302533.6235573/94‑1 (MQ=60)
CCGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTT < SRR4302533.2799396/94‑1 (MQ=60)
CGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGGGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTG > SRR4302533.3905633/1‑94 (MQ=60)
CGGCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTG < SRR4302533.1331492/94‑1 (MQ=60)
GCAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGT < SRR4302533.1081542/94‑1 (MQ=60)
CAGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTG < SRR4302533.1302756/94‑1 (MQ=60)
AGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGA > SRR4302533.3825124/1‑94 (MQ=60)
AGTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGA > SRR4302533.6165889/1‑94 (MQ=60)
GTCGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAG < SRR4302533.1508666/94‑1 (MQ=60)
CGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAGCA < SRR4302533.3536113/94‑1 (MQ=60)
CGCGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAGCA > SRR4302533.3789745/1‑94 (MQ=60)
CGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAGCAAT > SRR4302533.3694729/1‑94 (MQ=60)
CGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAGCAAT > SRR4302533.6058777/1‑94 (MQ=60)
|
TAATCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGTGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAGCAAT > NC_000913/1273300‑1273483
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
