Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,339,624 |
A→G |
K348R (AAG→AGG) |
yciM → |
putative heat shock protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,339,624 | 0 | A | G | 100.0%
| 660.6
/ NA
| 202 | K348R (AAG→AGG) | yciM | putative heat shock protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (82/120); total (82/120) |
Only 100 of 209 total aligned reads displayed.
TCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGG > NC_000913/1339534‑1339712
|
tCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAggg < 2:3644824/93‑1 (MQ=255)
ccATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGt < 1:1509042/93‑1 (MQ=255)
cATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAgggga > 2:536827/1‑91 (MQ=255)
cATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTa < 2:2003538/93‑1 (MQ=255)
cATAAGTTAAGGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGGCATGGTTGGCCAGAGGGTa < 2:6161948/93‑1 (MQ=255)
aTAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTAc > 1:372910/1‑93 (MQ=255)
aTAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTAc < 2:1473936/93‑1 (MQ=255)
aTAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTAc > 1:1726864/1‑93 (MQ=255)
aaGTTAATGAATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgt < 2:4638465/93‑1 (MQ=255)
aGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgta > 2:4456768/1‑93 (MQ=255)
ttAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgtagt < 2:910011/93‑1 (MQ=255)
ttAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgtagt < 2:5972258/93‑1 (MQ=255)
ttAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgtagt > 1:1862218/1‑93 (MQ=255)
ttAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgtagt < 1:1753274/93‑1 (MQ=255)
tAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgtagta < 2:449966/93‑1 (MQ=255)
aaTGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTaa < 2:1426925/93‑1 (MQ=255)
aTGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAg > 1:4323773/1‑93 (MQ=255)
ggATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGcc < 1:1381930/93‑1 (MQ=255)
ttACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCg > 2:1322731/1‑93 (MQ=255)
tACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGt < 2:2766598/93‑1 (MQ=255)
ccACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTa < 2:289660/93‑1 (MQ=255)
ccACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTa < 2:1552291/93‑1 (MQ=255)
cACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTAt > 2:5039414/1‑93 (MQ=255)
cACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTAt > 2:6074829/1‑93 (MQ=255)
cACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTAt < 1:141055/93‑1 (MQ=255)
cACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTAt < 1:5844824/93‑1 (MQ=255)
aCTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATc < 1:5052750/93‑1 (MQ=255)
ttAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGt < 1:410434/93‑1 (MQ=255)
tGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCa > 2:759457/1‑93 (MQ=255)
aaGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGa < 1:4179040/93‑1 (MQ=255)
gCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGaaa < 1:3781133/93‑1 (MQ=255)
ggAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAtg < 1:604083/93‑1 (MQ=255)
gaagaaGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAtgt < 1:1234796/93‑1 (MQ=255)
gaagaaGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAtgt < 2:6173273/93‑1 (MQ=255)
agaagGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTgg < 1:3872371/93‑1 (MQ=255)
gaagGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGt < 1:1262878/93‑1 (MQ=255)
gaagGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGt < 1:5382653/93‑1 (MQ=255)
aagGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGtt > 2:3016754/1‑93 (MQ=255)
aagGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGtt < 2:2353924/93‑1 (MQ=255)
agGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGttt < 2:1171941/93‑1 (MQ=255)
agGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGttt < 2:3186079/93‑1 (MQ=255)
agGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGttt > 2:2138070/1‑93 (MQ=255)
gggCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGtttt < 1:353749/93‑1 (MQ=255)
gggCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGtttt < 2:1691991/93‑1 (MQ=255)
gCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTAc < 1:2375423/93‑1 (MQ=255)
gCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTAc > 1:935507/1‑93 (MQ=255)
gCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTAc > 1:2936051/1‑93 (MQ=255)
gCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTAc > 1:5569198/1‑93 (MQ=255)
cGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTAcc < 1:1023519/93‑1 (MQ=255)
gTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCg > 1:2581844/1‑93 (MQ=255)
tGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGc > 1:6249415/1‑93 (MQ=255)
gCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCa < 2:4989170/93‑1 (MQ=255)
cAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATa < 2:1107092/93‑1 (MQ=255)
cAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATa > 1:4826931/1‑93 (MQ=255)
aaaGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATac > 1:6092978/1‑93 (MQ=255)
aaaGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATac < 1:3638699/93‑1 (MQ=255)
aaaGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATaa > 1:6209719/1‑92 (MQ=255)
aaGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATaca < 2:2598558/93‑1 (MQ=255)
aaGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATaca > 2:2673874/1‑93 (MQ=255)
agagagCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATacac < 2:3743072/93‑1 (MQ=255)
gagagCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACAcc < 1:4424170/93‑1 (MQ=255)
agagCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATacacac < 2:4957517/93‑3 (MQ=255)
agagCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACAccc < 1:4934101/93‑1 (MQ=255)
agagCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACAccc < 2:4710423/93‑1 (MQ=255)
gagCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCct < 2:5437810/93‑1 (MQ=255)
agCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCctc < 1:3665572/93‑1 (MQ=255)
agCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCctc < 1:2143693/93‑1 (MQ=255)
agCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCctc > 2:5280888/1‑93 (MQ=255)
gCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCctct > 1:2043702/1‑93 (MQ=255)
cTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTag < 2:6052877/93‑2 (MQ=255)
cTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTAc < 1:5319770/93‑1 (MQ=255)
cTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTAc < 1:3337748/93‑1 (MQ=255)
gATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTg > 1:2507289/1‑93 (MQ=255)
gATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTg > 1:2761157/1‑93 (MQ=255)
aTGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTgg > 2:3231818/1‑93 (MQ=255)
gTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCAt < 2:3137197/93‑1 (MQ=255)
tgctgcGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCAtt > 1:3273829/1‑93 (MQ=255)
tgctgcGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCAtt < 1:5164304/93‑1 (MQ=255)
gctgcGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTg < 1:5039047/93‑1 (MQ=255)
ctgcGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGt < 2:3455576/93‑1 (MQ=255)
gcGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTcc < 1:5147300/93‑1 (MQ=255)
gcGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTcc < 1:1790154/93‑1 (MQ=255)
gTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGt > 1:2942628/1‑93 (MQ=255)
gTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGt < 2:5174689/93‑1 (MQ=255)
tGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTc > 2:3311571/1‑93 (MQ=255)
tGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTc > 1:4708462/1‑93 (MQ=255)
tGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTc < 1:3934703/93‑1 (MQ=255)
gACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCt > 1:4772038/1‑93 (MQ=255)
aCATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCtt > 1:4495379/1‑93 (MQ=255)
aCATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCtt < 1:707486/93‑1 (MQ=255)
cATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTg > 2:4466785/1‑93 (MQ=255)
aTGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGt < 1:5755358/93‑1 (MQ=255)
aTGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGt < 1:6020194/93‑1 (MQ=255)
aTGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGt < 1:6126780/93‑1 (MQ=255)
aTGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGt > 2:1233336/1‑93 (MQ=255)
ggTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCg < 2:5541680/93‑1 (MQ=255)
ggTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCg > 1:2415886/1‑93 (MQ=255)
gTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCgg > 1:2531113/1‑93 (MQ=255)
gCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCt > 2:4886501/1‑93 (MQ=255)
gagaGGGTCCGTAGTAAGCATCGTTATCGCTGCCAGAAATGTGGCTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTgg > 2:6118765/1‑93 (MQ=255)
|
TCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGG > NC_000913/1339534‑1339712
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGGTCAAC > NC_000913/1339531‑1339717
|
TGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAG < SRR4302533.4147153/94‑1 (MQ=60)
TGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAG < SRR4302533.5405404/94‑1 (MQ=60)
TGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAG < SRR4302533.5385833/94‑1 (MQ=60)
TGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAG < SRR4302533.2671908/94‑1 (MQ=60)
GTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGG > SRR4302533.4378055/1‑94 (MQ=60)
GTTCCATAAGTTAATGGATTACCACTTAAAGGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGG < SRR4302533.173220/94‑1 (MQ=60)
CCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTA < SRR4302533.2998804/94‑1 (MQ=60)
CCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTA < SRR4302533.1518140/94‑1 (MQ=60)
CATAAGTTAATGGATTACCCCTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGCAC > SRR4302533.1912009/1‑94 (MQ=60)
CATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTAC > SRR4302533.375162/1‑94 (MQ=60)
CATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTAC > SRR4302533.1737346/1‑94 (MQ=60)
AAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTA > SRR4302533.2498797/1‑94 (MQ=60)
AGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAG < SRR4302533.2560608/94‑1 (MQ=60)
AGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAG < SRR4302533.3904446/94‑1 (MQ=60)
GTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGT > SRR4302533.1873573/1‑94 (MQ=60)
TTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTA < SRR4302533.1763952/94‑1 (MQ=60)
AATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAG > SRR4302533.4349810/1‑94 (MQ=60)
GGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCT < SRR4302533.1407733/94‑1 (MQ=60)
GGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCT < SRR4302533.1390249/94‑1 (MQ=60)
GATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTC < SRR4302533.1704321/94‑1 (MQ=60)
TTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGT < SRR4302533.3580865/94‑1 (MQ=60)
TACCACTTAAATGAAGCGTAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTT < SRR4302533.2537302/94‑1 (MQ=60)
CCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTAT > SRR4302533.4465423/1‑94 (MQ=60)
CCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTAT > SRR4302533.518772/1‑94 (MQ=60)
CCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTAT < SRR4302533.5285816/94‑1 (MQ=60)
CACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATC < SRR4302533.141956/94‑1 (MQ=60)
CACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATC < SRR4302533.5880159/94‑1 (MQ=60)
ACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCG < SRR4302533.5083300/94‑1 (MQ=60)
CTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGT < SRR4302533.3361079/94‑1 (MQ=60)
TTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTT < SRR4302533.412894/94‑1 (MQ=60)
TTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTT > SRR4302533.2956777/1‑94 (MQ=60)
TAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTG < SRR4302533.1230061/94‑1 (MQ=60)
ATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCA > SRR4302533.4330071/1‑94 (MQ=60)
TGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAG < SRR4302533.5828125/94‑1 (MQ=60)
TGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAG > SRR4302533.3632875/1‑94 (MQ=60)
GAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGA > SRR4302533.6064523/1‑94 (MQ=60)
AAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAA < SRR4302533.4204354/94‑1 (MQ=60)
GCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAT < SRR4302533.495079/94‑1 (MQ=60)
GCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAT < SRR4302533.5148896/94‑1 (MQ=60)
GCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAT < SRR4302533.3804293/94‑1 (MQ=60)
GCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAT < SRR4302533.508176/94‑1 (MQ=60)
GGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGT > SRR4302533.3723512/1‑94 (MQ=60)
GGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGT > SRR4302533.137213/1‑94 (MQ=60)
GGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGT < SRR4302533.607631/94‑1 (MQ=60)
GAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTG < SRR4302533.1242177/94‑1 (MQ=60)
AGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGT > SRR4302533.3324430/1‑94 (MQ=60)
AGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGT < SRR4302533.3896006/94‑1 (MQ=60)
GAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTT > SRR4302533.2797741/1‑94 (MQ=60)
GAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTT < SRR4302533.5414991/94‑1 (MQ=60)
GAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTT < SRR4302533.1270430/94‑1 (MQ=60)
AAGGACGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTAGTTATAGTTGCCAGAAATGTGGTTT < SRR4302533.6346083/94‑1 (MQ=60)
AGGGCGTGCCAAAGAGAGCCTGATGGTTCTGCGTCACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTT < SRR4302533.547917/94‑1 (MQ=60)
GGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTA > SRR4302533.2640452/1‑94 (MQ=60)
GGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTA < SRR4302533.355906/94‑1 (MQ=60)
GGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTA < SRR4302533.2390163/94‑1 (MQ=60)
GGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTAC < SRR4302533.6010241/94‑1 (MQ=60)
GGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTAC > SRR4302533.940997/1‑94 (MQ=60)
GGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTAC > SRR4302533.2954001/1‑94 (MQ=60)
GGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTAC > SRR4302533.5602862/1‑94 (MQ=60)
GCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACC < SRR4302533.2390122/94‑1 (MQ=60)
GCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACC < SRR4302533.3811018/94‑1 (MQ=60)
CGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCG > SRR4302533.2597725/1‑94 (MQ=60)
CGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCG < SRR4302533.1029534/94‑1 (MQ=60)
GTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGC > SRR4302533.6286805/1‑94 (MQ=60)
TGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCA < SRR4302533.3670726/94‑1 (MQ=60)
CCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATA > SRR4302533.4856181/1‑94 (MQ=60)
CCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATA > SRR4302533.2197289/1‑94 (MQ=60)
CCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATA > SRR4302533.6140961/1‑94 (MQ=60)
CAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATAC > SRR4302533.6129794/1‑94 (MQ=60)
CAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATAA > SRR4302533.6246962/1‑94 (MQ=60)
AAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACA < SRR4302533.3661072/94‑1 (MQ=60)
AAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACAC < SRR4302533.5697494/94‑1 (MQ=60)
AAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACAC > SRR4302533.5384262/1‑94 (MQ=60)
AGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACC < SRR4302533.4167319/94‑1 (MQ=60)
AGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACC > SRR4302533.6267066/1‑94 (MQ=60)
GAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCC < SRR4302533.4450913/94‑1 (MQ=60)
AGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCT < SRR4302533.4963979/94‑1 (MQ=60)
AGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCT < SRR4302533.5770613/94‑1 (MQ=60)
AGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCT < SRR4302533.2156900/94‑1 (MQ=60)
AGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCT < SRR4302533.3688105/94‑1 (MQ=60)
AGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCT > SRR4302533.2056301/1‑94 (MQ=60)
AGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCT < SRR4302533.6172529/94‑1 (MQ=60)
CCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTAC > SRR4302533.3794190/1‑94 (MQ=60)
CCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTAC < SRR4302533.2130408/94‑1 (MQ=60)
CTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACT < SRR4302533.4824616/94‑1 (MQ=60)
CTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACT < SRR4302533.3358376/94‑1 (MQ=60)
CTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACT < SRR4302533.5351653/94‑1 (MQ=60)
TGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTG > SRR4302533.1809938/1‑94 (MQ=60)
TGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTG > SRR4302533.2522744/1‑94 (MQ=60)
TGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTG > SRR4302533.2778081/1‑94 (MQ=60)
ATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGC > SRR4302533.1247202/1‑94 (MQ=60)
GTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATT < SRR4302533.405208/94‑1 (MQ=60)
GTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATT > SRR4302533.3294037/1‑94 (MQ=60)
TGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTG < SRR4302533.1425452/94‑1 (MQ=60)
TGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTG < SRR4302533.5195487/94‑1 (MQ=60)
GCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGT < SRR4302533.5069557/94‑1 (MQ=60)
TGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCC < SRR4302533.2389949/94‑1 (MQ=60)
GCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCG < SRR4302533.5178404/94‑1 (MQ=60)
GCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCG < SRR4302533.1801042/94‑1 (MQ=60)
CGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGT > SRR4302533.2960594/1‑94 (MQ=60)
CGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGT > SRR4302533.911567/1‑94 (MQ=60)
GTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTC > SRR4302533.4736999/1‑94 (MQ=60)
TGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCT > SRR4302533.4800958/1‑94 (MQ=60)
TGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCT < SRR4302533.3958721/94‑1 (MQ=60)
GACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTT < SRR4302533.1745279/94‑1 (MQ=60)
GACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTT > SRR4302533.4522601/1‑94 (MQ=60)
ACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTG < SRR4302533.711665/94‑1 (MQ=60)
ATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTC < SRR4302533.5790086/94‑1 (MQ=60)
ATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTC < SRR4302533.6056674/94‑1 (MQ=60)
ATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTC > SRR4302533.1789031/1‑94 (MQ=60)
ATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTC < SRR4302533.6163708/94‑1 (MQ=60)
TGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCG > SRR4302533.2430809/1‑94 (MQ=60)
TGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCG < SRR4302533.4664209/94‑1 (MQ=60)
GGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGG > SRR4302533.2546695/1‑94 (MQ=60)
GTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGG > SRR4302533.6077775/1‑94 (MQ=60)
GGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCT < SRR4302533.4767205/94‑1 (MQ=60)
GGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCT < SRR4302533.4986029/94‑1 (MQ=60)
GCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTG < SRR4302533.4601642/94‑1 (MQ=60)
CGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGG > SRR4302533.4449073/1‑94 (MQ=60)
GAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGGTCA > SRR4302533.3851252/1‑94 (MQ=60)
AGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGGTCAC > SRR4302533.615397/1‑94 (MQ=60)
AGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGGTCAC > SRR4302533.5882392/1‑94 (MQ=60)
GGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGGTCAAC > SRR4302533.3802120/1‑94 (MQ=60)
GGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGGTCAAC > SRR4302533.1266412/1‑94 (MQ=60)
|
TGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGGTCAAC > NC_000913/1339531‑1339717
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
