Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,347,664 |
A→G |
T182T (ACT→ACC) |
yciW ← |
putative oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,347,664 | 0 | A | G | 100.0%
| 766.7
/ NA
| 236 | T182T (ACT→ACC) | yciW | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (125/111); total (125/111) |
Only 100 of 243 total aligned reads displayed.
TGCCCGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCAGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGATTTG > NC_000913/1347575‑1347753
|
tGCCCGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTa > 2:3299460/1‑93 (MQ=255)
ccGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGa < 1:463176/93‑1 (MQ=255)
ccGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGa < 2:4353682/93‑1 (MQ=255)
cGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGAc > 2:2630127/1‑93 (MQ=255)
gagaTAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGAcc > 2:2167751/1‑93 (MQ=255)
gaTAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAACCCAATGATTTGGCTAATGATCACGCAGTCCCAGGCGGTAAGACCGa < 2:4971723/93‑1 (MQ=255)
gaTAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGa < 1:573657/93‑1 (MQ=255)
gaTAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGa < 1:3756184/93‑1 (MQ=255)
tAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATTACACAGTCCCAGGCGGTAAGACCGACg < 1:1056811/93‑1 (MQ=255)
tAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACg > 2:1988882/1‑93 (MQ=255)
tAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACg > 1:4834874/1‑93 (MQ=255)
tAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACg < 1:4179177/93‑1 (MQ=255)
aaGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGt < 2:5184438/93‑1 (MQ=255)
gCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCa < 1:2009824/93‑1 (MQ=255)
ccTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCAt < 1:5831670/93‑1 (MQ=255)
ccTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCAt > 1:1618730/1‑93 (MQ=255)
tGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTc > 1:3836924/1‑93 (MQ=255)
gAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCa > 1:3324712/1‑93 (MQ=255)
aaaTGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAg < 1:2861253/93‑1 (MQ=255)
aaaTGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAg > 1:1004172/1‑93 (MQ=255)
aaTGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGa < 2:2927308/93‑1 (MQ=255)
aaTGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGa < 2:3004396/93‑1 (MQ=255)
aTGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGAt < 2:3643210/93‑1 (MQ=255)
aTGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGAt > 1:1665585/1‑93 (MQ=255)
tGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATg > 1:702707/1‑93 (MQ=255)
tGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATg > 2:1671624/1‑93 (MQ=255)
tGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATg > 1:2262910/1‑93 (MQ=255)
gTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGc < 2:4486335/93‑1 (MQ=255)
tCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCt < 1:1317399/93‑1 (MQ=255)
tCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCt > 2:3107906/1‑93 (MQ=255)
cGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTg < 1:5897029/93‑1 (MQ=255)
gCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTgg > 1:2793698/1‑93 (MQ=255)
gCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTgg < 1:1412335/93‑1 (MQ=255)
gCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTgg < 1:2906777/93‑1 (MQ=255)
gCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTgg < 2:4670210/93‑1 (MQ=255)
gCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTgg > 2:4709538/1‑93 (MQ=255)
gTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGAt > 2:4553434/1‑93 (MQ=255)
tCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATc > 1:2226501/1‑93 (MQ=255)
tCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATc > 1:537867/1‑93 (MQ=255)
cgcgCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCgg > 1:574631/1‑93 (MQ=255)
ccTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGt > 1:3078541/1‑93 (MQ=255)
ccTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGt > 1:2576726/1‑93 (MQ=255)
cTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTc < 2:881376/93‑1 (MQ=255)
gAAAGCCAATAAAACCAATGATTTGGCTAATGATCTCACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGa > 2:484345/1‑93 (MQ=255)
gAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCCGATGCTGGCGCGATCCGTTGTCGa > 2:2728979/1‑93 (MQ=255)
gAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGa > 2:6067554/1‑93 (MQ=255)
gAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGa > 2:3785969/1‑93 (MQ=255)
gAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGa > 2:3407709/1‑93 (MQ=255)
aaGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGata < 1:4387341/93‑1 (MQ=255)
aaGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGata > 1:2125332/1‑93 (MQ=255)
aGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGataa > 1:3981705/1‑93 (MQ=255)
aGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGataa < 1:5296578/93‑1 (MQ=255)
accAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGataat < 1:2156898/92‑1 (MQ=255)
cAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAg > 2:4055753/1‑93 (MQ=255)
aaTAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGa > 2:188939/1‑93 (MQ=255)
aaTAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGa < 1:5057020/93‑1 (MQ=255)
aaTAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGa > 2:2379464/1‑93 (MQ=255)
aTAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGaa > 1:6201853/1‑93 (MQ=255)
tAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAg < 1:3135934/93‑1 (MQ=255)
tAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAg > 2:2893984/1‑93 (MQ=255)
aaaaCCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAgg < 2:1821702/93‑1 (MQ=255)
acaCCAATGATTTGACTAATGATCCAACAGTCCCAGGCGGTAAGCCCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGc < 2:5401424/91‑1 (MQ=255)
aaaCCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGc < 2:4111965/93‑1 (MQ=255)
aaCCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCg < 2:5112101/93‑1 (MQ=255)
aaCCAATGATTTGGCGAATGATCACACAGTCCCAGGCGGTAAGACCCGCGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAAAAgcca > 2:4032866/1‑90 (MQ=255)
aaTGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCt > 1:6109788/1‑93 (MQ=255)
aaTGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCt > 2:5667477/1‑93 (MQ=255)
aaTGATTTGGCTAATGATCACACAGTCCCACGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCt < 1:2545756/93‑1 (MQ=255)
aTGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTa < 2:1702919/93‑1 (MQ=255)
aTTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGcc < 2:1581519/93‑1 (MQ=255)
tttGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCa < 1:2074862/93‑1 (MQ=255)
tttGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCa < 2:1257126/93‑1 (MQ=255)
attGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCa < 1:2070187/92‑1 (MQ=255)
ttGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAg < 2:5915954/93‑1 (MQ=255)
tGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGt < 2:4425674/93‑1 (MQ=255)
tGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGt > 1:1128721/1‑93 (MQ=255)
ggCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGtt < 2:1078825/93‑1 (MQ=255)
cTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTgg > 1:552451/1‑93 (MQ=255)
cTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTgg < 2:2871452/93‑1 (MQ=255)
tAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGc > 2:5326740/1‑93 (MQ=255)
aaTGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCg > 2:4226483/1‑93 (MQ=255)
aTGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCgg < 2:5594095/93‑1 (MQ=255)
gATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGc > 2:2282543/1‑93 (MQ=255)
tCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCat > 2:3765714/1‑93 (MQ=255)
tCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCat < 2:5228469/93‑1 (MQ=255)
cacacaGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCata > 2:3214527/1‑93 (MQ=255)
cacacaGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCata < 1:4057989/93‑1 (MQ=255)
acacaGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCatat < 2:634060/93‑1 (MQ=255)
cccaGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATAtt < 2:5803174/91‑1 (MQ=255)
cacaGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATAtt < 2:3513449/93‑1 (MQ=255)
cacaGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATAtt < 1:2505175/93‑1 (MQ=255)
acaGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTg > 1:5206995/1‑93 (MQ=255)
caGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGc > 1:518054/1‑93 (MQ=255)
caGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGc < 2:6153234/93‑1 (MQ=255)
aGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCg > 1:3699673/1‑93 (MQ=255)
gTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGt > 1:840895/1‑93 (MQ=255)
cccAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGa > 2:1391946/1‑93 (MQ=255)
cAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGAtt < 1:6248038/93‑1 (MQ=255)
aGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGAttt > 1:4430844/1‑93 (MQ=255)
aGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGAttt < 1:3592714/93‑1 (MQ=255)
|
TGCCCGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCAGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGATTTG > NC_000913/1347575‑1347753
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGATGCCCGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCAGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGATTTGTG > NC_000913/1347571‑1347755
|
CGGATGCCCGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCG < SRR4302533.2485664/94‑1 (MQ=60)
CGGATGCCCGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCG > SRR4302533.4213670/1‑94 (MQ=60)
CGGATGCCCGAGATAAGCCTGAAATGCCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCG > SRR4302533.6001297/1‑94 (MQ=60)
GATGCCCGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGT < SRR4302533.5901179/94‑1 (MQ=60)
CCGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGAC < SRR4302533.465936/94‑1 (MQ=60)
CGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACC > SRR4302533.4167551/1‑94 (MQ=60)
AGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGC > SRR4302533.1668241/1‑94 (MQ=60)
AGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGA > SRR4302533.4641319/1‑94 (MQ=60)
GATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGAC < SRR4302533.3779208/94‑1 (MQ=60)
GATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGAC < SRR4302533.577039/94‑1 (MQ=60)
GATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGAC > SRR4302533.2783098/1‑94 (MQ=60)
ATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACG > SRR4302533.4864177/1‑94 (MQ=60)
ATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACG > SRR4302533.4419453/1‑94 (MQ=60)
TAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATTACACAGTCCCAGGCGGTAAGACCGACGT < SRR4302533.1063025/94‑1 (MQ=60)
TAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGT < SRR4302533.4204491/94‑1 (MQ=60)
AGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCA < SRR4302533.3351982/94‑1 (MQ=60)
AGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCA < SRR4302533.86107/94‑1 (MQ=60)
GCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCAT > SRR4302533.1628536/1‑94 (MQ=60)
GCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCAT < SRR4302533.2022205/94‑1 (MQ=60)
CCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATT < SRR4302533.5866915/94‑1 (MQ=60)
CCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATT > SRR4302533.6224338/1‑94 (MQ=60)
CTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTC > SRR4302533.3860366/1‑94 (MQ=60)
CTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTC > SRR4302533.3860365/1‑94 (MQ=60)
TGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCA > SRR4302533.5362363/1‑94 (MQ=60)
TGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCA > SRR4302533.3345251/1‑94 (MQ=60)
GAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAG > SRR4302533.1010045/1‑94 (MQ=60)
AAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGA < SRR4302533.2878853/94‑1 (MQ=60)
AATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGAT > SRR4302533.1675649/1‑94 (MQ=60)
ATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATG > SRR4302533.706863/1‑94 (MQ=60)
ATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATG < SRR4302533.746909/94‑1 (MQ=60)
ATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATG > SRR4302533.2276908/1‑94 (MQ=60)
ATGTCGCAATTGTCCGCACCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATG < SRR4302533.3791805/94‑1 (MQ=60)
TGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGC < SRR4302533.2352443/94‑1 (MQ=60)
GTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCT < SRR4302533.5803616/94‑1 (MQ=60)
TCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTG < SRR4302533.5636519/94‑1 (MQ=60)
TCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTG < SRR4302533.1325302/94‑1 (MQ=60)
CGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGG < SRR4302533.2443311/94‑1 (MQ=60)
CGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGG > SRR4302533.4278370/1‑94 (MQ=60)
CGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGG > SRR4302533.4416910/1‑94 (MQ=60)
CGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGG < SRR4302533.5224272/94‑1 (MQ=60)
CGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGG < SRR4302533.5932639/94‑1 (MQ=60)
CGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGG > SRR4302533.2810883/1‑94 (MQ=60)
GCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGC < SRR4302533.1420874/94‑1 (MQ=60)
GCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGC < SRR4302533.2924625/94‑1 (MQ=60)
CAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCG > SRR4302533.220774/1‑94 (MQ=60)
GTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATC > SRR4302533.2240246/1‑94 (MQ=60)
GTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATC > SRR4302533.541067/1‑94 (MQ=60)
TCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGCCATTCAGATGCTGGCGCGATCG > SRR4302533.2156199/1‑94 (MQ=60)
CCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGG > SRR4302533.578023/1‑94 (MQ=60)
CGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGT < SRR4302533.3297251/94‑1 (MQ=60)
CGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGATGTCATTCAGATGCTGGCGCGATCGGTTG < SRR4302533.2834258/94‑1 (MQ=60)
CGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTG < SRR4302533.3700611/94‑1 (MQ=60)
GCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGT > SRR4302533.2592579/1‑94 (MQ=60)
GCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGT > SRR4302533.3097431/1‑94 (MQ=60)
CCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTC < SRR4302533.6282165/94‑1 (MQ=60)
CCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTC > SRR4302533.4836441/1‑94 (MQ=60)
CCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTC > SRR4302533.2898163/1‑94 (MQ=60)
TGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGA > SRR4302533.4082439/1‑94 (MQ=60)
TGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGA < SRR4302533.4945285/94‑1 (MQ=60)
GAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGAT > SRR4302533.2714597/1‑94 (MQ=60)
GAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGAT > SRR4302533.5820240/1‑94 (MQ=60)
AAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATA < SRR4302533.701432/94‑1 (MQ=60)
AAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATA > SRR4302533.2138434/1‑94 (MQ=60)
AAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATA < SRR4302533.2100073/94‑1 (MQ=60)
AAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATA > SRR4302533.141493/1‑94 (MQ=60)
AAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAA < SRR4302533.4413828/94‑1 (MQ=60)
AAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAA > SRR4302533.4005947/1‑94 (MQ=60)
AAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAA > SRR4302533.4707044/1‑94 (MQ=60)
AGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAAT > SRR4302533.1578447/1‑94 (MQ=60)
AGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAAT < SRR4302533.5328300/94‑1 (MQ=60)
GCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATA < SRR4302533.3104231/94‑1 (MQ=60)
ACCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATA < SRR4302533.2170177/94‑1 (MQ=60)
CCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAG > SRR4302533.4026150/1‑94 (MQ=60)
AATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAA > SRR4302533.6239050/1‑94 (MQ=60)
AATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAA < SRR4302533.5087584/94‑1 (MQ=60)
AATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAA < SRR4302533.6224285/94‑1 (MQ=60)
AATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAA > SRR4302533.5534525/1‑94 (MQ=60)
ATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAG > SRR4302533.1690197/1‑94 (MQ=60)
TAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGG < SRR4302533.3155218/94‑1 (MQ=60)
AAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCG > SRR4302533.3799690/1‑94 (MQ=60)
ACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAG > SRR4302533.1043762/1‑94 (MQ=60)
ACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAG < SRR4302533.1917153/94‑1 (MQ=60)
ACCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAG < SRR4302533.1266913/94‑1 (MQ=60)
CCAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGC < SRR4302533.5147862/94‑1 (MQ=60)
CAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCT > SRR4302533.2084300/1‑94 (MQ=60)
CAATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCT > SRR4302533.6146671/1‑94 (MQ=60)
AATGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTA > SRR4302533.2215735/1‑94 (MQ=60)
AATGATTTGGCTAATGATCACACAGTCCCACGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTA < SRR4302533.2561419/94‑1 (MQ=60)
TGATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGC > SRR4302533.3677446/1‑94 (MQ=60)
GATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCC < SRR4302533.3775931/94‑1 (MQ=60)
ATTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCA > SRR4302533.5257874/1‑94 (MQ=60)
TTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAG < SRR4302533.2087636/94‑1 (MQ=60)
TTTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAG > SRR4302533.5409228/1‑94 (MQ=60)
ATTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAG < SRR4302533.2082937/94‑1 (MQ=60)
TTGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGT > SRR4302533.1135427/1‑94 (MQ=60)
TGGCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGTCAGTT < SRR4302533.1488224/94‑1 (MQ=60)
GCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGG > SRR4302533.555726/1‑94 (MQ=60)
GCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGG > SRR4302533.3048509/1‑94 (MQ=60)
GCTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGG < SRR4302533.1113573/94‑1 (MQ=60)
CTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGC > SRR4302533.5143263/1‑94 (MQ=60)
CTAATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGC > SRR4302533.5890700/1‑94 (MQ=60)
ATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGG > SRR4302533.2575871/1‑94 (MQ=60)
ATGATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGG < SRR4302533.568542/94‑1 (MQ=60)
GATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCA > SRR4302533.2258201/1‑94 (MQ=60)
ATCACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCAT > SRR4302533.3118591/1‑94 (MQ=60)
CACACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATAT < SRR4302533.4082691/94‑1 (MQ=60)
CACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTG < SRR4302533.2520619/94‑1 (MQ=60)
CACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTG > SRR4302533.5238366/1‑94 (MQ=60)
CACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTG > SRR4302533.5975702/1‑94 (MQ=60)
ACAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGC > SRR4302533.521133/1‑94 (MQ=60)
CAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCG < SRR4302533.57757/94‑1 (MQ=60)
CAGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCG > SRR4302533.3722396/1‑94 (MQ=60)
AGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGT < SRR4302533.128485/94‑1 (MQ=60)
AGTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGT > SRR4302533.845813/1‑94 (MQ=60)
GTCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAACGCGAGCTAGCCAGTTGGCGGGCATATTGCGTG > SRR4302533.2078586/1‑94 (MQ=60)
TCCCAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGA > SRR4302533.2122719/1‑94 (MQ=60)
CAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGATTT > SRR4302533.4457631/1‑94 (MQ=60)
CAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGATTT < SRR4302533.6285426/94‑1 (MQ=60)
CAGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGATTT < SRR4302533.71/94‑1 (MQ=60)
AGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGATTTG > SRR4302533.2553546/1‑94 (MQ=60)
AGGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGATTTG < SRR4302533.3614826/94‑1 (MQ=60)
GGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGATTTGT > SRR4302533.2663174/1‑94 (MQ=60)
GGCGGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGATTTGT < SRR4302533.2887210/94‑1 (MQ=60)
GCGGTAAGATCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGATTTGTG < SRR4302533.1111575/94‑1 (MQ=60)
|
CGGATGCCCGAGATAAGCCTGAAATGTCGCAATTGTCCGCGCCTGAAAGCCAATAAAACCAATGATTTGGCTAATGATCACACAGTCCCAGGCAGTAAGACCGACGTCATTCAGATGCTGGCGCGATCGGTTGTCGATAATAGAAGGCGAGCTAGCCAGTTGGCGGGCATATTGCGTGATTTGTG > NC_000913/1347571‑1347755
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
