Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,359,603 |
G→A |
A150T (GCA→ACA) |
ycjL → |
putative amidotransferase subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,359,603 | 0 | G | A | 100.0%
| 742.3
/ NA
| 203 | A150T (GCA→ACA) | ycjL | putative amidotransferase subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (87/116); total (87/116) |
Only 100 of 210 total aligned reads displayed.
ACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT > NC_000913/1359513‑1359692
|
aCCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACa < 2:881669/93‑1 (MQ=255)
aCCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACa > 1:4270291/1‑93 (MQ=255)
aCCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACa > 1:3273377/1‑93 (MQ=255)
aCCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACa > 1:3246040/1‑93 (MQ=255)
ccGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATacac > 1:6072835/1‑93 (MQ=255)
ggtggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATGCCGAACTGCCGGTGGAACAGCAATATACACCg > 1:2708440/1‑93 (MQ=255)
gtggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGt < 1:101163/93‑1 (MQ=255)
gtggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGt < 1:5425489/93‑1 (MQ=255)
gtggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGt < 1:5065070/93‑1 (MQ=255)
tggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTc > 2:5864767/1‑93 (MQ=255)
tggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTc > 1:1761431/1‑93 (MQ=255)
ggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCg < 1:5543715/93‑1 (MQ=255)
ttCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCa < 1:5468373/93‑1 (MQ=255)
tCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCAt < 2:785914/93‑1 (MQ=255)
tCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCAt < 2:5574289/93‑1 (MQ=255)
tCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCAt < 1:3644369/93‑1 (MQ=255)
cGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATg < 1:3524410/93‑1 (MQ=255)
ttGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGaa < 1:1571762/93‑1 (MQ=255)
ttGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGaa < 2:823895/93‑1 (MQ=255)
cATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGtt > 1:703967/1‑93 (MQ=255)
aTCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTc < 2:1333854/93‑1 (MQ=255)
tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCa > 1:2950050/1‑93 (MQ=255)
tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCa < 2:4577006/93‑1 (MQ=255)
tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCa > 1:4558271/1‑93 (MQ=255)
tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCa > 1:1090502/1‑93 (MQ=255)
tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCACGAAGTTCa < 2:6126630/93‑1 (MQ=255)
gCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCCGAGGTACAGCACTATACATCGTCGCATGCAGCTCAgg > 2:4478472/1‑93 (MQ=255)
cAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGt < 1:2768935/93‑1 (MQ=255)
aaGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGtt > 2:3545221/1‑93 (MQ=255)
aaGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGtt > 2:5349795/1‑93 (MQ=255)
aaGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGtt < 2:1170340/93‑1 (MQ=255)
aGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTg > 2:2617938/1‑93 (MQ=255)
aGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTg < 2:2519016/93‑1 (MQ=255)
gCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGa < 1:4403931/93‑1 (MQ=255)
gtgCGAACAGCTTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga < 2:711201/93‑1 (MQ=255)
gtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga > 1:1370013/1‑93 (MQ=255)
gtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga < 1:5239618/93‑1 (MQ=255)
tgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAagag > 2:1371463/1‑93 (MQ=255)
tgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAagag > 2:4782009/1‑93 (MQ=255)
tgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGCCGCATGAAGTTCAGGTTGAagag < 1:3843761/93‑1 (MQ=255)
gAACAGCCTGAATTACTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAgggg > 2:1826194/1‑93 (MQ=255)
aaCAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAggggg > 1:756757/1‑93 (MQ=255)
aaCAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAggggg > 1:5893034/1‑93 (MQ=255)
aCAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAgggggg < 1:2298235/93‑1 (MQ=255)
cAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGa < 1:1671343/93‑1 (MQ=255)
aGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGAt < 2:2150046/93‑1 (MQ=255)
gCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGAtt > 1:647471/1‑93 (MQ=255)
ccTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTa < 1:53042/93‑1 (MQ=255)
cTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTAc > 2:6074826/1‑93 (MQ=255)
gAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTg > 1:4387046/1‑93 (MQ=255)
gAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTg > 2:2067172/1‑93 (MQ=255)
gAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTg > 2:3828676/1‑93 (MQ=255)
gAATTGCGGGAAGATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTg < 1:1185968/93‑1 (MQ=255)
aaTTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGt > 1:2191050/1‑93 (MQ=255)
ttGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCt > 2:1090312/1‑93 (MQ=255)
tGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTg < 2:2908907/93‑1 (MQ=255)
cTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCg < 1:1974824/93‑1 (MQ=255)
tGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCgt < 2:90714/93‑1 (MQ=255)
ggAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCgtt > 2:36743/1‑93 (MQ=255)
gAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCgttg > 1:628904/1‑93 (MQ=255)
aaCATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCgttgt > 2:3428630/1‑93 (MQ=255)
cATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTa < 2:221215/93‑1 (MQ=255)
aTCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTAc > 1:600681/1‑93 (MQ=255)
tCGGGAAGATCCCGAACTGCCGGTGGATCAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTAcc < 1:1057578/93‑1 (MQ=255)
tCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTAcc < 2:5264521/93‑1 (MQ=255)
tCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTAcc > 2:415966/1‑93 (MQ=255)
gggAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTg > 2:584677/1‑93 (MQ=255)
gggAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTg < 1:4796608/93‑1 (MQ=255)
gAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGaa > 2:4125130/1‑93 (MQ=255)
gAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGaa < 1:5113840/93‑1 (MQ=255)
gAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGaa > 1:992206/1‑93 (MQ=255)
aGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATg < 1:2654604/93‑1 (MQ=255)
aTCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTa < 1:3017482/93‑1 (MQ=255)
aTCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTa < 1:4751404/93‑1 (MQ=255)
aTCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTa < 1:5718979/93‑1 (MQ=255)
tCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAg > 1:4862492/1‑93 (MQ=255)
tCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAg > 2:4268286/1‑93 (MQ=255)
tCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAg < 2:3363178/93‑1 (MQ=255)
cccGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGc < 2:4653573/93‑1 (MQ=255)
ccGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCa > 2:3475282/1‑93 (MQ=255)
ccGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCa < 1:777601/93‑1 (MQ=255)
caaCTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAAc < 1:6219985/92‑1 (MQ=255)
cTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACttt > 2:1462725/1‑93 (MQ=255)
tGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACtttt < 2:2578105/93‑1 (MQ=255)
cGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTggg < 2:5135353/93‑1 (MQ=255)
ggTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGt > 1:2319961/1‑93 (MQ=255)
gTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTa < 2:3947567/93‑1 (MQ=255)
gTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTa > 1:1201408/1‑93 (MQ=255)
tGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTaa > 2:2346171/1‑93 (MQ=255)
gAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAAc < 2:2791951/93‑1 (MQ=255)
aaCAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAAct < 1:5620488/93‑1 (MQ=255)
aCAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActc > 1:4619519/1‑93 (MQ=255)
aCAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActc < 2:3098869/93‑1 (MQ=255)
cAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActct > 2:3988499/1‑93 (MQ=255)
aGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActctc < 1:6167219/93‑1 (MQ=255)
gCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActctct > 1:4678837/1‑93 (MQ=255)
gCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActctct < 1:5864410/93‑1 (MQ=255)
gCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActctct > 2:2240668/1‑93 (MQ=255)
cAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTa < 1:3711155/93‑1 (MQ=255)
aaTATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTAc < 2:5989980/93‑1 (MQ=255)
|
ACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT > NC_000913/1359513‑1359692
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGG > NC_000913/1359511‑1359694
|
CAACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATAC > SRR4302533.3562016/1‑94 (MQ=60)
CAACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATAC < SRR4302533.1327239/94‑1 (MQ=60)
AACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACA > SRR4302533.3266053/1‑94 (MQ=60)
AACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACA > SRR4302533.3293582/1‑94 (MQ=60)
AACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACA < SRR4302533.4811274/94‑1 (MQ=60)
AACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACA > SRR4302533.4295996/1‑94 (MQ=60)
ACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACAC > SRR4302533.6109573/1‑94 (MQ=60)
CGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATGCCGAACTGCCGGTGGAACAGCAATATACACCG > SRR4302533.2725059/1‑94 (MQ=60)
GGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGT > SRR4302533.467979/1‑94 (MQ=60)
GTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTC < SRR4302533.4614949/94‑1 (MQ=60)
GTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTC < SRR4302533.5458164/94‑1 (MQ=60)
GTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTC < SRR4302533.101792/94‑1 (MQ=60)
GTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTC < SRR4302533.5017565/94‑1 (MQ=60)
GTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTC > SRR4302533.1772164/1‑94 (MQ=60)
GTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTC < SRR4302533.1892535/94‑1 (MQ=60)
GTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTC < SRR4302533.5095664/94‑1 (MQ=60)
GGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGC < SRR4302533.5577197/94‑1 (MQ=60)
TTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCAT < SRR4302533.5501331/94‑1 (MQ=60)
TCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATG < SRR4302533.3666775/94‑1 (MQ=60)
TCGTTGCATCGCAAGCTGTGCAAACAGCCAAAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCACATG < SRR4302533.6335658/94‑1 (MQ=60)
CGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGA < SRR4302533.3546131/94‑1 (MQ=60)
TTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAG > SRR4302533.3024205/1‑94 (MQ=60)
TTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAG < SRR4302533.1581229/94‑1 (MQ=60)
TGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCTGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGT > SRR4302533.32893/1‑94 (MQ=60)
TGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGT < SRR4302533.546251/94‑1 (MQ=60)
TGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGT > SRR4302533.3685361/1‑94 (MQ=60)
GCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTT > SRR4302533.708127/1‑94 (MQ=60)
ATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCA > SRR4302533.4585916/1‑94 (MQ=60)
ATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCA > SRR4302533.1096945/1‑94 (MQ=60)
ATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCA > SRR4302533.2968090/1‑94 (MQ=60)
TCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAG < SRR4302533.5745452/94‑1 (MQ=60)
TCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAG < SRR4302533.4580966/94‑1 (MQ=60)
CGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGG < SRR4302533.2012076/94‑1 (MQ=60)
CGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGG < SRR4302533.2327768/94‑1 (MQ=60)
CAAGCTGTGCTAATAGCCGGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACCCCGTCGCATGAAGTTCAGGTT < SRR4302533.2785927/94‑1 (MQ=60)
CAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTT < SRR4302533.5654103/94‑1 (MQ=60)
CAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTT < SRR4302533.2785928/94‑1 (MQ=60)
GCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAA < SRR4302533.4430521/94‑1 (MQ=60)
TGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA < SRR4302533.1163909/94‑1 (MQ=60)
TGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA > SRR4302533.1378247/1‑94 (MQ=60)
GTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAG < SRR4302533.5271121/94‑1 (MQ=60)
GTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAG < SRR4302533.4881134/94‑1 (MQ=60)
GTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAG > SRR4302533.2698703/1‑94 (MQ=60)
TGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGG < SRR4302533.5555999/94‑1 (MQ=60)
TGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGG < SRR4302533.922992/94‑1 (MQ=60)
TGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGCCGCATGAAGTTCAGGTTGAAGAGG < SRR4302533.3867239/94‑1 (MQ=60)
GCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGG > SRR4302533.1748465/1‑94 (MQ=60)
GAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGG > SRR4302533.5928629/1‑94 (MQ=60)
GAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGG < SRR4302533.47188/94‑1 (MQ=60)
GAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGG > SRR4302533.761211/1‑94 (MQ=60)
AACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGG > SRR4302533.5135148/1‑94 (MQ=60)
ACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGA < SRR4302533.2312489/94‑1 (MQ=60)
CAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGAT < SRR4302533.1681445/94‑1 (MQ=60)
CAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGAT < SRR4302533.1197832/94‑1 (MQ=60)
AGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATT > SRR4302533.651284/1‑94 (MQ=60)
AGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATT > SRR4302533.696292/1‑94 (MQ=60)
AGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATT > SRR4302533.5200243/1‑94 (MQ=60)
CCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGCAGTTCAGGTTGAAGAGGGGGGATTAC > SRR4302533.102327/1‑94 (MQ=60)
CCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTAC < SRR4302533.53400/94‑1 (MQ=60)
CTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACT > SRR4302533.5313111/1‑94 (MQ=60)
TGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGTGGGGGGATTACTG > SRR4302533.1079924/1‑94 (MQ=60)
TGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTG > SRR4302533.4413533/1‑94 (MQ=60)
TGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTG < SRR4302533.1644390/94‑1 (MQ=60)
GAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGT > SRR4302533.2204549/1‑94 (MQ=60)
GAATTGCGGGAAGATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGT < SRR4302533.1193086/94‑1 (MQ=60)
TTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTG < SRR4302533.2584143/94‑1 (MQ=60)
CTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGT > SRR4302533.6113361/1‑94 (MQ=60)
CTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGT < SRR4302533.1986918/94‑1 (MQ=60)
GGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTG > SRR4302533.632605/1‑94 (MQ=60)
AACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGCTGTT < SRR4302533.1572310/94‑1 (MQ=60)
CATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTAC > SRR4302533.604211/1‑94 (MQ=60)
ATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACC < SRR4302533.3629586/94‑1 (MQ=60)
TCGGGAAGATCCCGAACTGCCGGTGGATCAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCT < SRR4302533.1063796/94‑1 (MQ=60)
GGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGA < SRR4302533.4775127/94‑1 (MQ=60)
GGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGA < SRR4302533.4825664/94‑1 (MQ=60)
GGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAA > SRR4302533.998007/1‑94 (MQ=60)
GAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAAT < SRR4302533.5144740/94‑1 (MQ=60)
AGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGT > SRR4302533.2220453/1‑94 (MQ=60)
AGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGT < SRR4302533.2670910/94‑1 (MQ=60)
ATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAG < SRR4302533.3035937/94‑1 (MQ=60)
ATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAG > SRR4302533.4891963/1‑94 (MQ=60)
ATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAG < SRR4302533.5753512/94‑1 (MQ=60)
ATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAG > SRR4302533.5604920/1‑94 (MQ=60)
ATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAG < SRR4302533.4780211/94‑1 (MQ=60)
CCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCA < SRR4302533.4430077/94‑1 (MQ=60)
CCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAA < SRR4302533.782175/94‑1 (MQ=60)
CCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAA > SRR4302533.5774904/1‑94 (MQ=60)
CGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAAC < SRR4302533.294867/94‑1 (MQ=60)
CGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAAC < SRR4302533.384617/94‑1 (MQ=60)
CAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACT < SRR4302533.6257274/94‑1 (MQ=60)
AACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTT > SRR4302533.480219/1‑94 (MQ=60)
ACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTT > SRR4302533.604685/1‑94 (MQ=60)
GCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGG < SRR4302533.4308223/94‑1 (MQ=60)
GCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGG < SRR4302533.3526071/94‑1 (MQ=60)
CCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGG > SRR4302533.4274800/1‑94 (MQ=60)
CGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGT > SRR4302533.2334326/1‑94 (MQ=60)
GGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTA > SRR4302533.1208625/1‑94 (MQ=60)
GGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTA > SRR4302533.1374546/1‑94 (MQ=60)
TGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAA < SRR4302533.774032/94‑1 (MQ=60)
TGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAA > SRR4302533.720037/1‑94 (MQ=60)
GAACAGCAATGTACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACT > SRR4302533.3498412/1‑94 (MQ=60)
GAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACT > SRR4302533.598975/1‑94 (MQ=60)
AACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTC < SRR4302533.5654459/94‑1 (MQ=60)
AACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTC < SRR4302533.2164469/94‑1 (MQ=60)
AACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTC > SRR4302533.4647513/1‑94 (MQ=60)
CAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTC > SRR4302533.5908612/1‑94 (MQ=60)
AGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCT < SRR4302533.6293611/94‑1 (MQ=60)
AGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCT < SRR4302533.6204293/94‑1 (MQ=60)
AGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCT > SRR4302533.700933/1‑94 (MQ=60)
AGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCT < SRR4302533.5381895/94‑1 (MQ=60)
AGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCT > SRR4302533.4707195/1‑94 (MQ=60)
GCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTA < SRR4302533.5899864/94‑1 (MQ=60)
CAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTAC < SRR4302533.3733946/94‑1 (MQ=60)
ATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT > SRR4302533.6243506/1‑94 (MQ=60)
ATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT < SRR4302533.3139306/94‑1 (MQ=60)
ATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGG > SRR4302533.4133792/1‑94 (MQ=60)
|
CAACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGG > NC_000913/1359511‑1359694
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
