Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,359,603 |
G→A |
A150T (GCA→ACA) |
ycjL → |
putative amidotransferase subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,359,603 | 0 | G | A | 99.1%
| 768.6
/ ‑4.2
| 220 | A150T (GCA→ACA) | ycjL | putative amidotransferase subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/2); new base A (96/122); total (96/124) |
| Fisher's exact test for biased strand distribution p-value = 5.06e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.18e-01 |
Only 100 of 240 total aligned reads displayed.
ACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT > NC_000913/1359513‑1359692
|
ggtggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCg > 2:2111381/1‑93 (MQ=255)
gtggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGt < 1:7303077/93‑1 (MQ=255)
gtggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGt > 2:1492856/1‑93 (MQ=255)
gtggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGt < 2:3406647/93‑1 (MQ=255)
ttCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCa < 1:852252/93‑1 (MQ=255)
ttCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCa > 1:9331585/1‑93 (MQ=255)
ttCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCATCGCa < 1:5644897/93‑1 (MQ=255)
ttGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGaa < 2:3670667/93‑1 (MQ=255)
tGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGCCGCATGAAg > 1:2809011/1‑93 (MQ=255)
aTCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTc < 1:4428189/93‑1 (MQ=255)
aTCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGCGGAACAGCAATATACACCGTCGCATGAAGTTc > 1:9366539/1‑93 (MQ=255)
tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATGCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCa > 2:7430715/1‑93 (MQ=255)
tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCa < 1:1176367/93‑1 (MQ=255)
tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCa < 1:5952848/93‑1 (MQ=255)
tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCa > 1:232600/1‑93 (MQ=255)
cGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAg > 2:4855260/1‑93 (MQ=255)
gCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAgg < 1:518355/93‑1 (MQ=255)
cAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGt < 2:9016688/93‑1 (MQ=255)
cAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGt > 2:6672718/1‑93 (MQ=255)
aaGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGtt < 2:787876/93‑1 (MQ=255)
aaGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGtt < 1:1513574/93‑1 (MQ=255)
aGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTg > 1:6553013/1‑93 (MQ=255)
gCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGa < 2:1353684/93‑1 (MQ=255)
cTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGaa < 1:1528591/93‑1 (MQ=255)
tgtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAag < 2:2442947/93‑1 (MQ=255)
tgtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAag < 2:1995361/93‑1 (MQ=255)
gtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga < 2:3067408/93‑1 (MQ=255)
gtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga < 1:4127581/93‑1 (MQ=255)
gtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga < 2:1452919/93‑1 (MQ=255)
gtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga < 1:6478462/93‑1 (MQ=255)
gtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga < 2:7034732/93‑1 (MQ=255)
tgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga‑g > 1:3371601/1‑93 (MQ=255)
gCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑gg > 2:7712061/1‑93 (MQ=255)
gCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑gg < 2:4604068/93‑1 (MQ=255)
cGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑ggg < 2:1762604/93‑1 (MQ=255)
aaCAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑ggggg < 2:9565941/93‑1 (MQ=255)
aaCAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑ggggg > 2:8181009/1‑93 (MQ=255)
aaCAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑ggggg > 1:3016577/1‑93 (MQ=255)
gCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGAtt > 1:1871256/1‑93 (MQ=255)
gCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGAtt > 1:2456499/1‑93 (MQ=255)
ccTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTa > 2:9357842/1‑93 (MQ=255)
cTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTAc > 2:3437746/1‑93 (MQ=255)
tGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACt > 1:9492698/1‑93 (MQ=255)
tGAATTGCGGGAACATCGGGAAGAGCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACt < 1:3892716/93‑1 (MQ=255)
gAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTg < 2:2311991/93‑1 (MQ=255)
gAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTg < 1:6053844/93‑1 (MQ=255)
gAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTg > 2:4354328/1‑93 (MQ=255)
gAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTg > 1:6966841/1‑93 (MQ=255)
aTTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTc < 2:1117083/93‑1 (MQ=255)
aTTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTc < 2:2991084/93‑1 (MQ=255)
tGCTGGAACATCGGGAAGATCCAACACTACCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTg < 1:8982374/93‑1 (MQ=255)
gCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGCCTgg > 1:2409383/1‑92 (MQ=255)
tGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCgt < 1:7994820/93‑1 (MQ=255)
tGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCgt > 2:2599216/1‑93 (MQ=255)
ggAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCgtt > 2:7500946/1‑93 (MQ=255)
ggAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCgtt < 2:3773644/93‑1 (MQ=255)
ggAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCgtt < 1:10006497/93‑1 (MQ=255)
cATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTa < 2:4398781/93‑1 (MQ=255)
aTCGGAAAGATCCCGAAATGCCGGTGGAACGGCAATATACACCGTCGCATGAAATTGAGGTTGAGGA‑GGGGGGATTATTGTCTGCGTTGTTAc < 2:2734905/93‑1 (MQ=255)
tCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTAcc < 2:2643710/93‑1 (MQ=255)
gggAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGGTTACTGTCTGCGTTGTTACCTg > 1:5545173/1‑93 (MQ=255)
gggAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTg < 1:7313711/93‑1 (MQ=255)
ggAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGa > 1:1040414/1‑93 (MQ=255)
ggAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGa < 2:5386924/93‑1 (MQ=255)
gAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGaa < 1:5337248/93‑1 (MQ=255)
gAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGaa < 1:6916406/93‑1 (MQ=255)
gATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGt > 1:5029862/1‑93 (MQ=255)
gATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGt > 1:4043354/1‑93 (MQ=255)
cccGTACTGCCGGTGGAGCACCAATATACACCGTCGCAGGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTTCCTGAATGGAGc < 2:5138364/93‑1 (MQ=255)
cccGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGc < 2:721817/93‑1 (MQ=255)
cccGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGc > 1:4931118/1‑93 (MQ=255)
ccGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCa > 1:3494437/1‑93 (MQ=255)
cGAACTGCCGGTGGAACAGCAATNTACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCaa < 1:5314274/93‑1 (MQ=255)
cGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCaa > 1:7412925/1‑93 (MQ=255)
cGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCaa > 2:5921614/1‑93 (MQ=255)
gAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAAc < 2:4411281/93‑1 (MQ=255)
gAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAAc > 2:5243978/1‑93 (MQ=255)
gAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAAc < 1:2853080/93‑1 (MQ=255)
aCTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACtt < 1:8102902/93‑1 (MQ=255)
ggTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTGCCTGAATGTAGCAACTTTTGGGt < 2:9404247/93‑1 (MQ=255)
ggTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGt > 1:5716275/1‑93 (MQ=255)
ggAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTaaa > 1:4627471/1‑93 (MQ=255)
gAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAAc < 2:8380307/93‑1 (MQ=255)
aaCAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAAct > 2:6057313/1‑93 (MQ=255)
aCAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActc > 1:8872069/1‑93 (MQ=255)
aCAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActc > 1:1821631/1‑93 (MQ=255)
cAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActct < 2:5466082/93‑1 (MQ=255)
aGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActctc < 2:1931825/93‑1 (MQ=255)
gCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActctct < 2:8826152/93‑1 (MQ=255)
cAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTa < 2:4130441/93‑1 (MQ=255)
aaTATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGGTTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTAc < 1:9847557/93‑1 (MQ=255)
aaTATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTAc > 2:5630344/1‑93 (MQ=255)
aaTATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTAc < 1:8673259/93‑1 (MQ=255)
atatACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTGCCTGAATGTAGCAACTTTTGGGTAAACTCTCTACa < 2:2569780/93‑1 (MQ=255)
tataCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACa < 1:8429581/93‑1 (MQ=255)
tataCACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAt < 2:4991472/93‑1 (MQ=255)
tataCACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAt > 2:7861806/1‑93 (MQ=255)
tataCACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAt > 2:4751232/1‑93 (MQ=255)
tataCACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAt > 1:682108/1‑93 (MQ=255)
tataCACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGCGTAAACTCTCTACAt < 2:4801445/93‑1 (MQ=255)
|
ACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT > NC_000913/1359513‑1359692
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCAACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGGAC > NC_000913/1359510‑1359696
|
GCAACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATA < SRR4302540.9440314/94‑1 (MQ=60)
GCAACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATA > SRR4302540.10125678/1‑94 (MQ=60)
CAACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATAC < SRR4302540.8261544/94‑1 (MQ=60)
AACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACA < SRR4302540.1623650/94‑1 (MQ=60)
AACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACA > SRR4302540.7431313/1‑94 (MQ=60)
CCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACC > SRR4302540.2366960/1‑94 (MQ=60)
CGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCG > SRR4302540.3512739/1‑94 (MQ=60)
GGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGT < SRR4302540.5281724/94‑1 (MQ=60)
GTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTC < SRR4302540.7384595/94‑1 (MQ=60)
GTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTC > SRR4302540.3698162/1‑94 (MQ=60)
GTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTC > SRR4302540.6381332/1‑94 (MQ=60)
GTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCA > SRR4302540.9442848/1‑94 (MQ=60)
TTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCAT < SRR4302540.861301/94‑1 (MQ=60)
TTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCATCGCAT < SRR4302540.5707027/94‑1 (MQ=60)
TTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGCCGCATGAAG > SRR4302540.2839344/1‑94 (MQ=60)
GCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTT < SRR4302540.5718433/94‑1 (MQ=60)
CATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGCGGAACAGCAATATACACCGTCGCATGAAGTTC > SRR4302540.9478068/1‑94 (MQ=60)
ATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCA < SRR4302540.4476169/94‑1 (MQ=60)
ATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCA > SRR4302540.8089204/1‑94 (MQ=60)
ATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCA > SRR4302540.234846/1‑94 (MQ=60)
TCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAG < SRR4302540.6018686/94‑1 (MQ=60)
TCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAG < SRR4302540.3315073/94‑1 (MQ=60)
TCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAG < SRR4302540.1188526/94‑1 (MQ=60)
GCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGT < SRR4302540.523913/94‑1 (MQ=60)
CAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTT < SRR4302540.9843465/94‑1 (MQ=60)
AAGTTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGTACTGCCGGTGGAACAGCAATATGCCCCGTCGCAGGAAGTTCAGGTTG < SRR4302540.7907841/94‑1 (MQ=60)
AAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTG > SRR4302540.2322465/1‑94 (MQ=60)
AAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTG < SRR4302540.1530307/94‑1 (MQ=60)
AAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTG > SRR4302540.6625688/1‑94 (MQ=60)
AAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTG > SRR4302540.6095654/1‑94 (MQ=60)
CTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAG < SRR4302540.1545519/94‑1 (MQ=60)
TGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA < SRR4302540.1160039/94‑1 (MQ=60)
GTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑G < SRR4302540.4172188/94‑1 (MQ=60)
GTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑G < SRR4302540.6550532/94‑1 (MQ=60)
GTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑G > SRR4302540.3408453/1‑94 (MQ=60)
GTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑G < SRR4302540.2511786/94‑1 (MQ=60)
CGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGG < SRR4302540.9513916/94‑1 (MQ=60)
GAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGG > SRR4302540.3049737/1‑94 (MQ=60)
AACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGG > SRR4302540.5572288/1‑94 (MQ=60)
AGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATT < SRR4302540.1397948/94‑1 (MQ=60)
AGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATT > SRR4302540.1891762/1‑94 (MQ=60)
AGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATT > SRR4302540.2482936/1‑94 (MQ=60)
CTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACT > SRR4302540.9605216/1‑94 (MQ=60)
TGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTG > SRR4302540.7044302/1‑94 (MQ=60)
TGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTG < SRR4302540.7060152/94‑1 (MQ=60)
TGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTG < SRR4302540.4181458/94‑1 (MQ=60)
TGAATTGCGGGAACATCGGGAAGAGCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTG < SRR4302540.3934974/94‑1 (MQ=60)
GAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGT > SRR4302540.7320702/1‑94 (MQ=60)
GAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGT < SRR4302540.6121126/94‑1 (MQ=60)
GAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGT < SRR4302540.4157702/94‑1 (MQ=60)
GAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGT < SRR4302540.3077438/94‑1 (MQ=60)
AATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTC > SRR4302540.7623022/1‑94 (MQ=60)
AATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTC > SRR4302540.2436568/1‑94 (MQ=60)
TGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGcctgg > SRR4302540.2435359/1‑89 (MQ=60)
TGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGC < SRR4302540.6495191/94‑1 (MQ=60)
TGCTGGAACATCGGGAAGATCCAACACTACCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGC < SRR4302540.9089503/94‑1 (MQ=60)
GCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCG < SRR4302540.5482252/94‑1 (MQ=60)
TGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTT > SRR4302540.8933915/1‑94 (MQ=60)
TGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTT < SRR4302540.8087887/94‑1 (MQ=60)
GGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTG < SRR4302540.10123037/94‑1 (MQ=60)
GGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTG < SRR4302540.10123038/94‑1 (MQ=60)
GGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGATCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTG > SRR4302540.4071471/1‑94 (MQ=60)
GAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGT < SRR4302540.656580/94‑1 (MQ=60)
AACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTT < SRR4302540.6979124/94‑1 (MQ=60)
ACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTA < SRR4302540.8252413/94‑1 (MQ=60)
CGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGGTTACTGTCTGCGTTGTTACCTG > SRR4302540.5606254/1‑94 (MQ=60)
GGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGA < SRR4302540.7395379/94‑1 (MQ=60)
GGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGA > SRR4302540.5904846/1‑94 (MQ=60)
GGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGA > SRR4302540.1050994/1‑94 (MQ=60)
GGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGA > SRR4302540.9947471/1‑94 (MQ=60)
GGGAAGATCACGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGA < SRR4302540.7395378/94‑1 (MQ=60)
GGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAT > SRR4302540.1683901/1‑94 (MQ=60)
GGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAA > SRR4302540.1683900/1‑94 (MQ=60)
GGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAA > SRR4302540.1545470/1‑94 (MQ=60)
GAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAAT < SRR4302540.6993366/94‑1 (MQ=60)
GAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAAT < SRR4302540.5395758/94‑1 (MQ=60)
GAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGCTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAAT > SRR4302540.4275593/1‑94 (MQ=60)
AGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGT > SRR4302540.4086946/1‑94 (MQ=60)
AGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGT > SRR4302540.936931/1‑94 (MQ=60)
AGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGT > SRR4302540.9467735/1‑94 (MQ=60)
AGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGT > SRR4302540.5084293/1‑94 (MQ=60)
GATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTA > SRR4302540.6878243/1‑94 (MQ=60)
ATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAG < SRR4302540.2368021/94‑1 (MQ=60)
TCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGC > SRR4302540.4984279/1‑94 (MQ=60)
CCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCA > SRR4302540.3532499/1‑94 (MQ=60)
CCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAA > SRR4302540.7495490/1‑94 (MQ=60)
CGAACTGCCGGTGGAACAGCAATNTACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAAC < SRR4302540.5372468/94‑1 (MQ=60)
GAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACT < SRR4302540.8640896/94‑1 (MQ=60)
GAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACT < SRR4302540.7028967/94‑1 (MQ=60)
GAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACT < SRR4302540.2883992/94‑1 (MQ=60)
CAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACT < SRR4302540.2883991/94‑1 (MQ=60)
ACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTT < SRR4302540.5249690/94‑1 (MQ=60)
ACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTT < SRR4302540.8196946/94‑1 (MQ=60)
CTGCCGGTGGAACAACAATATACACCGACGCATGAAGTTCAGGTTGAAGA‑GGGGGAATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTT < SRR4302540.9072789/94‑1 (MQ=60)
GCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGG < SRR4302540.5187159/94‑1 (MQ=60)
GCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGG < SRR4302540.10109857/94‑1 (MQ=60)
CGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGT > SRR4302540.5779197/1‑94 (MQ=60)
CGGTGGAACAGCAATATACACCGCCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGT > SRR4302540.5779198/1‑94 (MQ=60)
GGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTA > SRR4302540.2937020/1‑94 (MQ=60)
GTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAA < SRR4302540.5661850/94‑1 (MQ=60)
TGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAA < SRR4302540.465309/94‑1 (MQ=60)
TGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAA > SRR4302540.4677044/1‑94 (MQ=60)
GGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAAC < SRR4302540.1445354/94‑1 (MQ=60)
GAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACT < SRR4302540.879352/94‑1 (MQ=60)
AACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTC > SRR4302540.1841536/1‑94 (MQ=60)
AACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTC > SRR4302540.8974744/1‑94 (MQ=60)
CAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTC > SRR4302540.1842553/1‑94 (MQ=60)
AGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCT > SRR4302540.4795361/1‑94 (MQ=60)
AATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGGTTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACA < SRR4302540.9962669/94‑1 (MQ=60)
AATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACA < SRR4302540.8774004/94‑1 (MQ=60)
ATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT > SRR4302540.689418/1‑94 (MQ=60)
ATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT > SRR4302540.6926557/1‑94 (MQ=60)
ATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT > SRR4302540.5072619/1‑94 (MQ=60)
ATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT < SRR4302540.2508183/94‑1 (MQ=60)
ATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT > SRR4302540.5377436/1‑94 (MQ=60)
ATATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT > SRR4302540.9159154/1‑94 (MQ=60)
TATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT < SRR4302540.8527443/94‑1 (MQ=60)
TATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT < SRR4302540.8527444/94‑1 (MQ=60)
TATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT < SRR4302540.8527442/94‑1 (MQ=60)
TATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATG < SRR4302540.3640456/94‑1 (MQ=60)
TATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATG > SRR4302540.2563088/1‑94 (MQ=60)
TATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATG > SRR4302540.3146102/1‑94 (MQ=60)
TATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATG < SRR4302540.4809293/94‑1 (MQ=60)
TATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATG > SRR4302540.8321995/1‑94 (MQ=60)
ATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGG < SRR4302540.3726199/94‑1 (MQ=60)
ATACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGG < SRR4302540.2111352/94‑1 (MQ=60)
TACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGGA < SRR4302540.9432353/94‑1 (MQ=60)
TACACCATCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGGA < SRR4302540.8223136/94‑1 (MQ=60)
ACACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGGAC > SRR4302540.5465180/1‑94 (MQ=60)
|
GCAACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGA‑GGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGGAC > NC_000913/1359510‑1359696
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
