Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,377,715 |
G→A |
R603H (CGC→CAC) |
ycjT → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,377,715 | 0 | G | A | 100.0%
| 654.5
/ NA
| 181 | R603H (CGC→CAC) | ycjT | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (85/96); total (85/96) |
Only 100 of 194 total aligned reads displayed.
AACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCGCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGC > NC_000913/1377625‑1377804
|
aaCAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCACTCTGCAATTTTATGAACCGcaca < 1:184039/93‑1 (MQ=255)
aaCAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGcaca < 2:5131727/93‑1 (MQ=255)
aCAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCacac < 1:2937486/93‑1 (MQ=255)
aaGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTa > 2:3581934/1‑93 (MQ=255)
aGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTAt < 1:130583/93‑1 (MQ=255)
aGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTAt < 2:4864345/93‑1 (MQ=255)
aGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTAt > 1:3861911/1‑93 (MQ=255)
gCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTAtt < 2:4175301/93‑1 (MQ=255)
gCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTAtt < 1:6182112/93‑1 (MQ=255)
tGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCa < 2:3631678/93‑1 (MQ=255)
gATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCAc > 2:972951/1‑93 (MQ=255)
gATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCAc < 1:4497862/93‑1 (MQ=255)
gATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCAc < 1:1658955/93‑1 (MQ=255)
tgtgGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATTAACCGCACACTATTCACGa > 2:1388427/1‑93 (MQ=255)
gtggtgATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGAc < 1:3822998/93‑1 (MQ=255)
gATGCTCAATTGCATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCCCGACTCGTc < 1:1366916/93‑1 (MQ=255)
gATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTc < 2:2235383/93‑1 (MQ=255)
gATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTc > 2:4664848/1‑93 (MQ=255)
aTGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCa < 2:174871/93‑1 (MQ=255)
gCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCAtt < 2:1204306/93‑1 (MQ=255)
tCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTaa < 2:735542/93‑1 (MQ=255)
cAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAg < 1:2749879/93‑1 (MQ=255)
cAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAg > 1:3606323/1‑93 (MQ=255)
aaTTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGt > 1:5586399/1‑93 (MQ=255)
aaTTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGt < 1:5842713/93‑1 (MQ=255)
aaTTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGt < 1:4045963/93‑1 (MQ=255)
ttACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTaa < 2:3041730/93‑1 (MQ=255)
ttACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTaa < 1:518958/93‑1 (MQ=255)
aCATGCTGCCGGAGCAGTTCTCAGCGGCATCGGGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAg > 1:5213793/1‑93 (MQ=255)
cATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGc < 2:3938327/93‑1 (MQ=255)
cATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGc < 1:991487/93‑1 (MQ=255)
tgctgcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCaa < 1:281683/93‑1 (MQ=255)
gctgcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAAt < 1:2812065/93‑1 (MQ=255)
gctgcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAAt < 1:220700/93‑1 (MQ=255)
tgcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATcc > 1:6019991/1‑93 (MQ=255)
tgcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATcc > 2:575536/1‑93 (MQ=255)
tgcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATcc > 1:6244123/1‑93 (MQ=255)
gcCGGAGCAGTTCTCAGGGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCa < 2:11040/93‑1 (MQ=255)
gcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCa > 2:3784776/1‑93 (MQ=255)
ccGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCAc < 1:4835291/93‑1 (MQ=255)
ccGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCAc > 2:4400344/1‑93 (MQ=255)
cGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACg < 1:5899896/93‑1 (MQ=255)
cGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACg > 1:2573920/1‑93 (MQ=255)
ggAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACgg > 1:362169/1‑93 (MQ=255)
gAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGc < 1:6263791/93‑1 (MQ=255)
gCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAt > 1:5568017/1‑93 (MQ=255)
cAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAtt < 1:4081503/93‑1 (MQ=255)
cAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAtt < 1:784265/93‑1 (MQ=255)
gTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATTCACGGCAttgt > 1:3694975/1‑93 (MQ=255)
gTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAttgt < 1:5302791/93‑1 (MQ=255)
gTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAttgt > 1:1684561/1‑93 (MQ=255)
gTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAttgt > 2:561485/1‑93 (MQ=255)
ttCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAttgtt < 1:6135255/93‑1 (MQ=255)
ttCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAttgtt > 2:259061/1‑93 (MQ=255)
tctcAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAttgttg > 1:3747630/1‑93 (MQ=255)
tcAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGcc < 2:524275/93‑1 (MQ=255)
aGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGc < 1:5910887/93‑1 (MQ=255)
aGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGc < 2:1849169/93‑1 (MQ=255)
cGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCAc < 2:2430145/93‑1 (MQ=255)
gCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGc < 2:4778140/93‑1 (MQ=255)
gCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGc < 1:5645893/93‑1 (MQ=255)
cATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCt > 2:3170956/1‑93 (MQ=255)
aTCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCtg < 1:1583617/93‑1 (MQ=255)
aTCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCtg < 2:6253672/93‑1 (MQ=255)
tCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCtgt < 2:2090032/93‑1 (MQ=255)
tCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCtgt < 1:2699140/93‑1 (MQ=255)
cGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCtgtg > 1:733891/1‑93 (MQ=255)
tgtCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGc > 2:2282040/1‑93 (MQ=255)
tgtCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGc > 2:695506/1‑93 (MQ=255)
tttttGCAATTCTGCAATTTTATGACCCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGcc < 2:5895455/90‑1 (MQ=255)
gtCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGcc < 2:1556043/93‑1 (MQ=255)
tCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCct > 2:4534702/1‑93 (MQ=255)
tCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCct < 2:239007/93‑1 (MQ=255)
cTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCctg > 1:2506220/1‑93 (MQ=255)
ttGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCctgc < 2:4091982/93‑1 (MQ=255)
tGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCctgct < 1:2249667/93‑1 (MQ=255)
tGCAAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCctgct > 2:6059413/1‑93 (MQ=255)
cAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGAc > 1:2072998/1‑93 (MQ=255)
aaTCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGAcc > 1:4885837/1‑93 (MQ=255)
tCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCa > 1:1046098/1‑93 (MQ=255)
tGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCaaa > 2:3379299/1‑93 (MQ=255)
tGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCaaa > 1:1985186/1‑93 (MQ=255)
gCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAg < 2:1482571/93‑1 (MQ=255)
aaTTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGtt < 2:4336737/93‑1 (MQ=255)
ttttATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTAt > 2:4935091/1‑93 (MQ=255)
tttATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATc < 2:1916144/93‑1 (MQ=255)
ttATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCa < 1:932737/93‑1 (MQ=255)
ttATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCa < 2:1931866/93‑1 (MQ=255)
ttATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCa < 2:2103688/93‑1 (MQ=255)
tATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGGCCCAAAGCTATCAg > 1:393584/1‑93 (MQ=255)
tGACCCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGtt < 1:3127465/93‑1 (MQ=255)
gAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTc < 2:1681984/93‑1 (MQ=255)
aaCCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCt < 1:755198/93‑1 (MQ=255)
aaCCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCt > 1:1549971/1‑93 (MQ=255)
aCCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTg < 2:5658525/93‑1 (MQ=255)
ccGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTgg < 2:1361347/93‑1 (MQ=255)
ccGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTgg < 1:5953628/93‑1 (MQ=255)
cgcaCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGgc > 2:4205486/1‑93 (MQ=255)
cgcaCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGgc > 1:5730911/1‑93 (MQ=255)
cgcaCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGgc < 1:1229837/93‑1 (MQ=255)
|
AACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCGCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGC > NC_000913/1377625‑1377804
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCAAACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCGCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCGC > NC_000913/1377622‑1377806
|
TCAAACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCA < SRR4302533.5520489/94‑1 (MQ=60)
AACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCACTCTGCAATTTTATGAACCGCACAC < SRR4302533.185184/94‑1 (MQ=60)
AACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACAC < SRR4302533.3706552/94‑1 (MQ=60)
ACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACT < SRR4302533.2955440/94‑1 (MQ=60)
AAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTAT > SRR4302533.3885485/1‑94 (MQ=60)
AGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATT < SRR4302533.131402/94‑1 (MQ=60)
GCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTC < SRR4302533.6219235/94‑1 (MQ=60)
CTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCA < SRR4302533.1905189/94‑1 (MQ=60)
TGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCAC < SRR4302533.5819616/94‑1 (MQ=60)
GATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACG < SRR4302533.4525102/94‑1 (MQ=60)
GATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACG < SRR4302533.1668990/94‑1 (MQ=60)
TGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGAC < SRR4302533.3828685/94‑1 (MQ=60)
GTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACT < SRR4302533.3846370/94‑1 (MQ=60)
GATGCTCAATTGCATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCCCGACTCGTCA < SRR4302533.1375133/94‑1 (MQ=60)
TCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAG > SRR4302533.3628521/1‑94 (MQ=60)
CAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGT > SRR4302533.5620153/1‑94 (MQ=60)
CAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGT < SRR4302533.2766738/94‑1 (MQ=60)
AATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTA > SRR4302533.1645927/1‑94 (MQ=60)
AATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTA < SRR4302533.4070585/94‑1 (MQ=60)
AATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTA < SRR4302533.5878036/94‑1 (MQ=60)
ATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAA > SRR4302533.2046048/1‑94 (MQ=60)
TTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAA < SRR4302533.522042/94‑1 (MQ=60)
TACATGCTGCCGGAGCAGTTCTCAGCGGCATCGGGTCTTGCCAATTTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAG > SRR4302533.5245190/1‑94 (MQ=60)
ACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGA > SRR4302533.5217818/1‑94 (MQ=60)
CATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCA < SRR4302533.997283/94‑1 (MQ=60)
TGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAAT < SRR4302533.283406/94‑1 (MQ=60)
GCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATC < SRR4302533.222085/94‑1 (MQ=60)
GCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATC < SRR4302533.2829371/94‑1 (MQ=60)
CTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCC > SRR4302533.6056468/1‑94 (MQ=60)
CTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCC > SRR4302533.6293135/1‑94 (MQ=60)
CTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCC > SRR4302533.6281500/1‑94 (MQ=60)
GCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCAC < SRR4302533.946577/94‑1 (MQ=60)
GCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCAC > SRR4302533.3501532/1‑94 (MQ=60)
CCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACG < SRR4302533.4864599/94‑1 (MQ=60)
CCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACG > SRR4302533.1275509/1‑94 (MQ=60)
CCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACG > SRR4302533.2589753/1‑94 (MQ=60)
CCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACG > SRR4302533.2540497/1‑94 (MQ=60)
CGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGG < SRR4302533.638819/94‑1 (MQ=60)
CGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGG < SRR4302533.5935526/94‑1 (MQ=60)
CGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGG > SRR4302533.1513310/1‑94 (MQ=60)
CGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGG > SRR4302533.364372/1‑94 (MQ=60)
CGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGG > SRR4302533.5946427/1‑94 (MQ=60)
GAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCA < SRR4302533.6301230/94‑1 (MQ=60)
AGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAT > SRR4302533.5601673/1‑94 (MQ=60)
GCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATT < SRR4302533.3017018/94‑1 (MQ=60)
CAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTG < SRR4302533.4106349/94‑1 (MQ=60)
CAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTG < SRR4302533.788879/94‑1 (MQ=60)
AGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATTCACGGCATTGT > SRR4302533.3717670/1‑94 (MQ=60)
AGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGT > SRR4302533.1694767/1‑94 (MQ=60)
AGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGT > SRR4302533.1694766/1‑94 (MQ=60)
AGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGT > SRR4302533.3642321/1‑94 (MQ=60)
GTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTT < SRR4302533.5334560/94‑1 (MQ=60)
GTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTT > SRR4302533.5698622/1‑94 (MQ=60)
TTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTG < SRR4302533.6172222/94‑1 (MQ=60)
TTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTG > SRR4302533.3770606/1‑94 (MQ=60)
TTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTG < SRR4302533.5906651/94‑1 (MQ=60)
TTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTG < SRR4302533.283066/94‑1 (MQ=60)
TCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGC < SRR4302533.2234345/94‑1 (MQ=60)
TCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCG < SRR4302533.6177649/94‑1 (MQ=60)
CAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTACCGC > SRR4302533.4104240/1‑94 (MQ=60)
AGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCA < SRR4302533.5946600/94‑1 (MQ=60)
AGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCA > SRR4302533.749448/1‑94 (MQ=60)
GCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCAC < SRR4302533.4021054/94‑1 (MQ=60)
CGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACG > SRR4302533.4826957/1‑94 (MQ=60)
GCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCT < SRR4302533.5680025/94‑1 (MQ=60)
ATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGT > SRR4302533.184290/1‑94 (MQ=60)
ATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGT < SRR4302533.1593161/94‑1 (MQ=60)
TCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTG < SRR4302533.2715696/94‑1 (MQ=60)
TCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTG < SRR4302533.5977788/94‑1 (MQ=60)
TCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTG > SRR4302533.738209/1‑94 (MQ=60)
CGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGG < SRR4302533.4519743/94‑1 (MQ=60)
TGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCC > SRR4302533.1326457/1‑94 (MQ=60)
TGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCC < SRR4302533.5608631/94‑1 (MQ=60)
TGTCTTGCCAATCTGCAATTTNATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCC < SRR4302533.2363268/94‑1 (MQ=60)
TCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTG > SRR4302533.2521671/1‑94 (MQ=60)
TGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTG < SRR4302533.2263571/94‑1 (MQ=60)
CCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGAC > SRR4302533.2085767/1‑94 (MQ=60)
CAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACC > SRR4302533.4915437/1‑94 (MQ=60)
AATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCC > SRR4302533.5643909/1‑94 (MQ=60)
ATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCA > SRR4302533.1052246/1‑94 (MQ=60)
ATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCA > SRR4302533.3720032/1‑94 (MQ=60)
CTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAA > SRR4302533.1997331/1‑94 (MQ=60)
CTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAA < SRR4302533.846827/94‑1 (MQ=60)
CAATTTTATGAACCGCACACTATTCACGGCTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTT < SRR4302533.1073488/94‑1 (MQ=60)
CAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTT > SRR4302533.1584274/1‑94 (MQ=60)
CAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTT > SRR4302533.2134349/1‑94 (MQ=60)
AATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTA > SRR4302533.6113075/1‑94 (MQ=60)
AATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTA > SRR4302533.3896425/1‑94 (MQ=60)
TTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGGCCCAAAGCTATCAG > SRR4302533.395971/1‑94 (MQ=60)
TTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAG < SRR4302533.2891675/94‑1 (MQ=60)
TTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAG < SRR4302533.938211/94‑1 (MQ=60)
TTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAG > SRR4302533.3879618/1‑94 (MQ=60)
ATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTT > SRR4302533.622271/1‑94 (MQ=60)
TGACCCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTC < SRR4302533.3146689/94‑1 (MQ=60)
GAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCT < SRR4302533.525934/94‑1 (MQ=60)
GAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCT < SRR4302533.5443276/94‑1 (MQ=60)
GAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCT < SRR4302533.6012423/94‑1 (MQ=60)
GAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCT > SRR4302533.1559310/1‑94 (MQ=60)
AACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTG < SRR4302533.759642/94‑1 (MQ=60)
AACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTG < SRR4302533.2638011/94‑1 (MQ=60)
CCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGC < SRR4302533.4893132/94‑1 (MQ=60)
CCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGC < SRR4302533.5989641/94‑1 (MQ=60)
CCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGC > SRR4302533.5765513/1‑94 (MQ=60)
CCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGC > SRR4302533.2747795/1‑94 (MQ=60)
CGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCG > SRR4302533.5239087/1‑94 (MQ=60)
CGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCG > SRR4302533.2384621/1‑94 (MQ=60)
CGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCG < SRR4302533.1237199/94‑1 (MQ=60)
GCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCGC > SRR4302533.4104959/1‑94 (MQ=60)
GCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCGC < SRR4302533.4483774/94‑1 (MQ=60)
GCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCGC > SRR4302533.4911511/1‑94 (MQ=60)
GCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCGC < SRR4302533.5785779/94‑1 (MQ=60)
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TCAAACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCGCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCGC > NC_000913/1377622‑1377806
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
