Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,399,041 |
T→C |
T255A (ACA→GCA) |
ydaH ← |
putative pump protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,399,041 | 0 | T | C | 99.5%
| 640.0
/ NA
| 197 | T255A (ACA→GCA) | ydaH | putative pump protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (105/91); minor base G (1/0); total (106/91) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 202 total aligned reads displayed.
GCGGGATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTA > NC_000913/1398951‑1399130
|
gCGGGATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCt < 2:4887655/93‑1 (MQ=255)
cGGGATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTg < 1:3463491/93‑1 (MQ=255)
ggATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCa > 1:5072074/1‑93 (MQ=255)
ggATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCa < 2:2278535/93‑1 (MQ=255)
cccATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTtc < 1:1825833/92‑1 (MQ=255)
aCCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTtc < 2:5058910/93‑1 (MQ=255)
ccATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTtct < 1:1605965/93‑1 (MQ=255)
tCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCAt > 2:3970431/1‑93 (MQ=255)
tCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCAt > 2:5822836/1‑93 (MQ=255)
tCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCAt < 1:6194411/93‑1 (MQ=255)
tCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCAt < 1:5852516/93‑1 (MQ=255)
tCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCAt > 2:6272888/1‑93 (MQ=255)
cAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATc < 1:1753757/93‑1 (MQ=255)
gcgcAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGc < 2:5466185/93‑1 (MQ=255)
gcgcAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGc > 2:5592563/1‑93 (MQ=255)
cgcAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCt > 2:3205804/1‑93 (MQ=255)
aaTCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGtt > 2:5344509/1‑93 (MQ=255)
aaTCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGtt > 2:5187856/1‑93 (MQ=255)
aaTCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGtt > 1:6024815/1‑93 (MQ=255)
cGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTcc > 1:1084832/1‑93 (MQ=255)
cagcaATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCt > 2:729917/1‑93 (MQ=255)
cagcaATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCt < 2:4210670/93‑1 (MQ=255)
agcaATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTg > 2:3492707/1‑93 (MQ=255)
agcaATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTg > 1:1895181/1‑93 (MQ=255)
gcaATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGc < 2:4398058/93‑1 (MQ=255)
aaTAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCa > 1:4718309/1‑93 (MQ=255)
agaaaGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTg > 2:1365466/3‑93 (MQ=255)
aaaaGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGa > 1:249667/1‑93 (MQ=255)
aaaGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGAc < 1:5672356/93‑1 (MQ=255)
aGTAGCGATACGACACCTGCTATGCGTAACCCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCt < 2:2352199/93‑1 (MQ=255)
tAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTaa > 1:808105/1‑93 (MQ=255)
cGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCg < 1:1393664/93‑1 (MQ=255)
gATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGt < 2:4652844/93‑1 (MQ=255)
gATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGt < 1:4899758/93‑1 (MQ=255)
gATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGt < 1:2556545/93‑1 (MQ=255)
gATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGt > 1:2108333/1‑93 (MQ=255)
gATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGt > 2:1225238/1‑93 (MQ=255)
gATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGt < 1:3886953/93‑1 (MQ=255)
gATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGt < 1:3746054/93‑1 (MQ=255)
gATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGt > 2:5725023/1‑93 (MQ=255)
aTACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTg > 2:2819994/1‑93 (MQ=255)
tACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTgg > 2:6183962/1‑93 (MQ=255)
aCGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGc < 2:3391557/93‑1 (MQ=255)
gACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTc > 2:5295412/1‑93 (MQ=255)
gACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTc < 1:411165/93‑1 (MQ=255)
caccccTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTc < 2:2327817/89‑1 (MQ=255)
acacCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCg > 1:2734824/1‑93 (MQ=255)
cacCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCga < 2:3098092/93‑1 (MQ=255)
cccTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCgat < 2:428141/92‑1 (MQ=255)
acCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCgat > 2:2135142/1‑93 (MQ=255)
acCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCgat < 1:1921586/93‑1 (MQ=255)
ccTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCgatg < 2:2492173/93‑1 (MQ=255)
ccTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCgatg > 2:5890053/1‑93 (MQ=255)
cTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCgatga > 1:3738368/1‑93 (MQ=255)
cTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCgatga < 1:2251469/93‑1 (MQ=255)
cTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCgatga > 2:1562413/1‑93 (MQ=255)
cTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCACCGCTGTTTCCCTGCCATTGACCTAACCGAGGCTCgatga < 2:185114/93‑1 (MQ=255)
gCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGAtt < 1:1705125/93‑1 (MQ=255)
gCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGAtt > 2:4764217/1‑93 (MQ=255)
gCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGAtt > 1:3317722/1‑93 (MQ=255)
tATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGAtttt > 1:473476/1‑93 (MQ=255)
tATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGAtttt < 1:5332152/93‑1 (MQ=255)
tATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGAtttt < 1:5122932/93‑1 (MQ=255)
tGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGt > 1:4074739/1‑93 (MQ=255)
tGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGt > 1:489106/1‑93 (MQ=255)
gTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCgg < 2:5086763/93‑1 (MQ=255)
tAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGt > 2:4050812/1‑93 (MQ=255)
tAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGt > 2:1677779/1‑93 (MQ=255)
aaaCCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGtt > 1:103426/1‑93 (MQ=255)
aaaCCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGtt > 1:5420395/1‑93 (MQ=255)
aaCCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTa > 1:1590063/1‑93 (MQ=255)
aCCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTAt > 1:4442737/1‑93 (MQ=255)
aCCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTAt > 1:4776458/1‑93 (MQ=255)
ccAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATc < 1:4949666/93‑1 (MQ=255)
ccAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATc < 1:2579876/93‑1 (MQ=255)
cAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCa < 1:1291851/93‑1 (MQ=255)
cAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCa < 1:3644331/93‑1 (MQ=255)
aaaCGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAgg > 2:1958198/1‑93 (MQ=255)
aaCGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGgc < 1:902335/93‑1 (MQ=255)
aaCGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCCATGATTTTGTCGGTTATCAGgc > 2:4668232/1‑93 (MQ=255)
gCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGgccgc > 2:2616510/1‑93 (MQ=255)
gCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGgccgc < 1:3817345/93‑1 (MQ=255)
gCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGgccgc < 2:3588876/93‑1 (MQ=255)
cTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGgccgcc > 1:5252698/1‑93 (MQ=255)
tGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCca > 1:3425713/1‑93 (MQ=255)
gACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCcaa > 2:1491682/1‑93 (MQ=255)
gACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCcaa < 1:2329876/93‑1 (MQ=255)
gACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCcaa > 1:3523558/1‑93 (MQ=255)
cTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCcaaca > 2:2872022/1‑93 (MQ=255)
cGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCg > 1:2809527/1‑93 (MQ=255)
cGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCg > 2:2829234/1‑93 (MQ=255)
tCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCa > 1:2038459/1‑93 (MQ=255)
tCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCa < 2:2166963/93‑1 (MQ=255)
cAATGGCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCTATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAg < 1:3205309/93‑1 (MQ=255)
cAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAg < 2:1882070/93‑1 (MQ=255)
aaTGGCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGGCAgg > 2:1009749/1‑92 (MQ=255)
aaTGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGt < 2:3021885/93‑1 (MQ=255)
aaTGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGt > 1:1189180/1‑93 (MQ=255)
aTGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTa < 1:4315750/93‑1 (MQ=255)
aTGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTa > 2:5683834/1‑93 (MQ=255)
|
GCGGGATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTA > NC_000913/1398951‑1399130
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCGGGATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTACGAC > NC_000913/1398950‑1399134
|
TGCGGGATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCT < SRR4302533.6102383/94‑1 (MQ=60)
CGGGATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGC < SRR4302533.3484871/94‑1 (MQ=60)
GGGATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCA < SRR4302533.1086059/94‑1 (MQ=60)
GGGATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCA > SRR4302533.5102731/1‑94 (MQ=60)
GGGATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCA > SRR4302533.5287898/1‑94 (MQ=60)
TCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTT > SRR4302533.346948/1‑94 (MQ=60)
TCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTT > SRR4302533.2527931/1‑94 (MQ=60)
CCCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCT < SRR4302533.1836985/94‑1 (MQ=60)
ACCATCAGCGCTATCGCAGCACTAACAAGTAGCGATACGACACCTGCTATGCGTAAACCTAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCT < SRR4302533.6335174/94‑1 (MQ=60)
CCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTC < SRR4302533.1615688/94‑1 (MQ=60)
ATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCAT > SRR4302533.1613509/1‑94 (MQ=60)
ATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCAT < SRR4302533.3801288/94‑1 (MQ=60)
TCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATC < SRR4302533.6231579/94‑1 (MQ=60)
TCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATC < SRR4302533.5887898/94‑1 (MQ=60)
CAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCG < SRR4302533.1764441/94‑1 (MQ=60)
CAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCG > SRR4302533.6016758/1‑94 (MQ=60)
GCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCT < SRR4302533.1886138/94‑1 (MQ=60)
CGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGATG < SRR4302533.3528529/94‑1 (MQ=60)
CAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTT > SRR4302533.6061324/1‑94 (MQ=60)
CAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTT < SRR4302533.4120401/94‑1 (MQ=60)
AATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTT > SRR4302533.2249236/1‑94 (MQ=60)
ATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTC < SRR4302533.82177/94‑1 (MQ=60)
TCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCC < SRR4302533.1183784/94‑1 (MQ=60)
TCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCC > SRR4302533.1091230/1‑94 (MQ=60)
GCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCT < SRR4302533.1919471/94‑1 (MQ=60)
GCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCT > SRR4302533.5748481/1‑94 (MQ=60)
CAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTG > SRR4302533.1906749/1‑94 (MQ=60)
CAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCA > SRR4302533.4746922/1‑94 (MQ=60)
AATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCAT > SRR4302533.2844266/1‑94 (MQ=60)
TAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTG > SRR4302533.1784078/1‑94 (MQ=60)
AAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGA > SRR4302533.251208/1‑94 (MQ=60)
AAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGAC > SRR4302533.5081245/1‑94 (MQ=60)
AAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACC < SRR4302533.5706614/94‑1 (MQ=60)
GTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAA > SRR4302533.812854/1‑94 (MQ=60)
GTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAA > SRR4302533.1534472/1‑94 (MQ=60)
GTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAA < SRR4302533.4554414/94‑1 (MQ=60)
AGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACC > SRR4302533.6140500/1‑94 (MQ=60)
CGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGT < SRR4302533.1402061/94‑1 (MQ=60)
CGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGT > SRR4302533.2121336/1‑94 (MQ=60)
GATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTCACCGTG > SRR4302533.2417224/1‑94 (MQ=60)
GATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTG > SRR4302533.4775750/1‑94 (MQ=60)
GATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTG < SRR4302533.4875532/94‑1 (MQ=60)
GATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTG < SRR4302533.2572268/94‑1 (MQ=60)
GATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTG < SRR4302533.4929443/94‑1 (MQ=60)
GATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTG < SRR4302533.3910666/94‑1 (MQ=60)
GATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTG < SRR4302533.4929444/94‑1 (MQ=60)
GATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTG < SRR4302533.3769023/94‑1 (MQ=60)
GATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTG < SRR4302533.3693853/94‑1 (MQ=60)
GATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTG > SRR4302533.2069945/1‑94 (MQ=60)
CGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTC < SRR4302533.4433003/94‑1 (MQ=60)
GACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCG < SRR4302533.413630/94‑1 (MQ=60)
GACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCG < SRR4302533.3551334/94‑1 (MQ=60)
GACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCG > SRR4302533.2751600/1‑94 (MQ=60)
ACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATG < SRR4302533.1933315/94‑1 (MQ=60)
ACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATG > SRR4302533.1222971/1‑94 (MQ=60)
CCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGA > SRR4302533.3761295/1‑94 (MQ=60)
CTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGAT < SRR4302533.2704532/94‑1 (MQ=60)
CTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGAT < SRR4302533.2265388/94‑1 (MQ=60)
TGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATT > SRR4302533.3338214/1‑94 (MQ=60)
GCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTT < SRR4302533.1715451/94‑1 (MQ=60)
CTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTT > SRR4302533.476305/1‑94 (MQ=60)
CTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTT < SRR4302533.5375913/94‑1 (MQ=60)
TATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTG < SRR4302533.5364109/94‑1 (MQ=60)
TATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTG < SRR4302533.5153885/94‑1 (MQ=60)
ATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGT < SRR4302533.3900401/94‑1 (MQ=60)
ATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGT > SRR4302533.492031/1‑94 (MQ=60)
ATGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGT > SRR4302533.4099546/1‑94 (MQ=60)
TGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTC > SRR4302533.2799323/1‑94 (MQ=60)
TGCGTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTC < SRR4302533.1340384/94‑1 (MQ=60)
GTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGT < SRR4302533.5250756/94‑1 (MQ=60)
GTAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGT < SRR4302533.495870/94‑1 (MQ=60)
TAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTT > SRR4302533.5453013/1‑94 (MQ=60)
TAAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTT > SRR4302533.104074/1‑94 (MQ=60)
AAACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTA > SRR4302533.1599681/1‑94 (MQ=60)
AACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTAT > SRR4302533.4805395/1‑94 (MQ=60)
AACCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTAT > SRR4302533.4469601/1‑94 (MQ=60)
CCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCA < SRR4302533.2595752/94‑1 (MQ=60)
CCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCA < SRR4302533.1735750/94‑1 (MQ=60)
CCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCA > SRR4302533.1944366/1‑94 (MQ=60)
CCAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCA < SRR4302533.4979643/94‑1 (MQ=60)
CAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAG < SRR4302533.3666736/94‑1 (MQ=60)
CAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAG < SRR4302533.1299634/94‑1 (MQ=60)
CAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAG < SRR4302533.332312/94‑1 (MQ=60)
CAAAACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAG > SRR4302533.3914434/1‑94 (MQ=60)
AACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCGATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCC < SRR4302533.3409455/94‑1 (MQ=60)
AACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCC < SRR4302533.907627/94‑1 (MQ=60)
AACGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCC < SRR4302533.168002/94‑1 (MQ=60)
CGCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGC > SRR4302533.3767903/1‑94 (MQ=60)
GCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCC > SRR4302533.4756196/1‑94 (MQ=60)
GCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCC < SRR4302533.3840686/94‑1 (MQ=60)
GCTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCC > SRR4302533.5284258/1‑94 (MQ=60)
CTGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCA > SRR4302533.3446873/1‑94 (MQ=60)
TGACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAA > SRR4302533.3545276/1‑94 (MQ=60)
GACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAAC < SRR4302533.2344300/94‑1 (MQ=60)
GACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAAC > SRR4302533.2279863/1‑94 (MQ=60)
ACTTTCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACA > SRR4302533.4245521/1‑94 (MQ=60)
TCGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCG > SRR4302533.2826814/1‑94 (MQ=60)
CGGTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGT > SRR4302533.5114691/1‑94 (MQ=60)
GGTCAATGCCTGCATTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTC < SRR4302533.719171/94‑1 (MQ=60)
GTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCA > SRR4302533.2051032/1‑94 (MQ=60)
GTCAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCA > SRR4302533.2580759/1‑94 (MQ=60)
CAATGGCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCTATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGT < SRR4302533.3225042/94‑1 (MQ=60)
CAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGT > SRR4302533.1196318/1‑94 (MQ=60)
CAATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGT > SRR4302533.924663/1‑94 (MQ=60)
ATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTAC < SRR4302533.5637966/94‑1 (MQ=60)
ATGCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTAC < SRR4302533.4341737/94‑1 (MQ=60)
GCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTACGA > SRR4302533.6002935/1‑94 (MQ=60)
GCCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTACGA > SRR4302533.1869574/1‑94 (MQ=60)
CCTGCAGTTTCTCATCGCTGTTTGCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTACGAC > SRR4302533.3126971/1‑94 (MQ=60)
CCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTACGAC < SRR4302533.250841/94‑1 (MQ=60)
CCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTACGAC > SRR4302533.3286466/1‑94 (MQ=60)
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TGCGGGATCACCATCAGCGCAATCGCAGCAATAAAAAGTAGCGATACGACACCTGCTATGCGTAAACCAAAACGCTGACTTTCGGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTATCAGGCCGCCAACAATCGTCAGTACGAC > NC_000913/1398950‑1399134
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
