Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,405,126 |
T→C |
M252V (ATG→GTG) |
b1341 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,405,126 | 0 | T | C | 100.0%
| 752.9
/ NA
| 231 | M252V (ATG→GTG) | b1341 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (117/114); total (117/114) |
Only 100 of 236 total aligned reads displayed.
GTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAG > NC_000913/1405036‑1405215
|
gTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGa > 2:4604959/1‑93 (MQ=255)
gTAAGCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGa < 2:1987994/93‑1 (MQ=255)
tAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAg > 2:4189123/1‑93 (MQ=255)
tAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAg < 1:5539281/93‑1 (MQ=255)
tAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAg > 1:1867106/1‑93 (MQ=255)
aaTCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGc > 1:3730484/1‑93 (MQ=255)
aTCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCt < 1:2371587/93‑1 (MQ=255)
aTCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCt < 2:2869973/93‑1 (MQ=255)
aTCCGGTCAGCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCt < 1:1400854/93‑1 (MQ=255)
tCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCtt > 1:5997242/1‑93 (MQ=255)
cGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGt > 2:4800812/1‑93 (MQ=255)
ggTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTc < 2:5914494/93‑1 (MQ=255)
cATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGcc > 2:6152419/1‑93 (MQ=255)
cATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGcc > 2:188825/1‑93 (MQ=255)
tCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCAt < 1:2050416/93‑1 (MQ=255)
tCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCAt > 1:2817238/1‑93 (MQ=255)
gcgTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATaa < 1:2912497/93‑1 (MQ=255)
gTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAAt > 1:1026996/1‑93 (MQ=255)
tCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAAtt > 2:1211481/1‑93 (MQ=255)
cATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAAttt > 1:4504587/1‑93 (MQ=255)
cATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAAttt < 2:1863831/93‑1 (MQ=255)
aTGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTc > 2:6288514/1‑93 (MQ=255)
tGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCa < 1:4826/93‑1 (MQ=255)
tGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCa < 1:4595619/93‑1 (MQ=255)
ggTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCaa < 1:6236087/93‑1 (MQ=255)
gTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAAt < 2:4035107/93‑1 (MQ=255)
tGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATc > 1:4881639/1‑93 (MQ=255)
gAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCg < 2:1549870/93‑1 (MQ=255)
agcagcATGTCCGAGCTGCCCTTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCgg < 2:5963764/93‑1 (MQ=255)
cagcaTGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTc > 2:280341/1‑93 (MQ=255)
gcaTGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCg > 1:4998965/1‑93 (MQ=255)
ttCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATa < 1:3433132/93‑1 (MQ=255)
ttCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATa < 2:3648466/93‑1 (MQ=255)
ttCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATa < 1:1714565/93‑1 (MQ=255)
ttCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATa < 2:4346973/93‑1 (MQ=255)
tCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAg < 1:2997658/93‑1 (MQ=255)
ccAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAgg > 2:3390259/1‑93 (MQ=255)
ccAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAgg < 1:391840/93‑1 (MQ=255)
ccAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAgg > 1:1265545/1‑93 (MQ=255)
cAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGt < 2:1130098/93‑1 (MQ=255)
aGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTc < 2:2274584/93‑1 (MQ=255)
aGCTGCTCCCCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTc < 1:1730894/93‑1 (MQ=255)
gctgctCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCt < 2:354581/93‑1 (MQ=255)
tgctCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGc > 1:3811317/1‑93 (MQ=255)
tcctccAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGcaca > 2:5269356/1‑93 (MQ=255)
tcctccAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGcaca > 2:5739074/1‑93 (MQ=255)
ccctccAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGcaca < 1:3130970/92‑1 (MQ=255)
cctccAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACAt < 1:1356041/93‑1 (MQ=255)
cctccAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACAt < 1:1932994/93‑1 (MQ=255)
ctccAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATg < 1:2756977/93‑1 (MQ=255)
tccAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGa > 1:114515/1‑93 (MQ=255)
tccAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGa > 2:3322413/1‑93 (MQ=255)
tccAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGa < 2:4246577/93‑1 (MQ=255)
tccAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGa > 1:4250415/1‑93 (MQ=255)
cAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCTATCGGTCCGGCATAGGTCTGCACATGACg > 2:6189994/1‑93 (MQ=255)
cAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACg < 2:4509030/93‑1 (MQ=255)
gCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAg < 1:5321947/93‑1 (MQ=255)
gCCGTTTTTGCGCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAg < 2:1021859/93‑1 (MQ=255)
gcGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGt < 2:5131923/92‑1 (MQ=255)
ccGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCGTAGGTCTGCACATGACGAGt < 2:5301340/93‑1 (MQ=255)
cGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTc > 1:2260471/1‑93 (MQ=255)
ttttGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGaa < 2:1573554/93‑1 (MQ=255)
tGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCa < 2:5191902/93‑1 (MQ=255)
tGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCa > 2:3184807/1‑93 (MQ=255)
tGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTCCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCa < 2:1232660/93‑1 (MQ=255)
gCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCAt < 1:5259275/93‑1 (MQ=255)
gCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCAt > 2:2917692/1‑93 (MQ=255)
gCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCAt > 2:3207966/1‑93 (MQ=255)
cTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATc < 2:2541093/93‑1 (MQ=255)
cTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATc < 1:3569267/93‑1 (MQ=255)
tCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATcc < 2:3764036/93‑1 (MQ=255)
cAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCg < 2:5651152/93‑1 (MQ=255)
cAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCg < 2:1305227/93‑1 (MQ=255)
cAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGCCTGCACATGACGAGTCGAACCATCCg > 1:1986643/1‑93 (MQ=255)
aGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGc > 2:39723/1‑93 (MQ=255)
gTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGcc > 1:4221360/1‑93 (MQ=255)
gTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGcc > 2:1390405/1‑93 (MQ=255)
gTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATACGcc > 1:245082/1‑93 (MQ=255)
atAATATCATCCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGcc < 1:1422110/92‑1 (MQ=255)
atatCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGt < 1:5967397/93‑1 (MQ=255)
atatCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGt > 1:4028724/1‑93 (MQ=255)
atatCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGt < 2:1782189/93‑1 (MQ=255)
atCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGttt < 1:2656936/93‑1 (MQ=255)
atCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGtct > 1:2518838/1‑91 (MQ=255)
tCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTa < 1:2184979/93‑1 (MQ=255)
cATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTAt < 2:488808/93‑1 (MQ=255)
cATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTAt > 2:6007817/1‑93 (MQ=255)
cATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTAt < 2:729905/93‑1 (MQ=255)
aTGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATg < 1:843800/93‑1 (MQ=255)
cacaATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAAc < 2:3427173/93‑1 (MQ=255)
caATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACaa < 1:5603568/93‑1 (MQ=255)
caATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACaa > 2:2126394/1‑93 (MQ=255)
aaTACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACaaa > 1:5043079/1‑93 (MQ=255)
aTACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACaaaa < 2:1590714/93‑1 (MQ=255)
aTACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACaaaa > 2:2444317/1‑93 (MQ=255)
tACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAAt > 2:2241974/1‑93 (MQ=255)
cATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTc < 2:5524650/93‑1 (MQ=255)
cATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTc > 2:5090107/1‑93 (MQ=255)
aTAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCa > 1:5664800/1‑93 (MQ=255)
acacGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAg < 2:6119461/93‑1 (MQ=255)
|
GTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAG > NC_000913/1405036‑1405215
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTT > NC_000913/1405033‑1405219
|
TCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACAC < SRR4302533.3820200/94‑1 (MQ=60)
TCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACAC < SRR4302533.4566620/94‑1 (MQ=60)
CAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACG > SRR4302533.167332/1‑94 (MQ=60)
CAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACG < SRR4302533.6032886/94‑1 (MQ=60)
AGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGA < SRR4302533.2769684/94‑1 (MQ=60)
GTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAG > SRR4302533.1878490/1‑94 (MQ=60)
GTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAG < SRR4302533.1907893/94‑1 (MQ=60)
TAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGC < SRR4302533.5572730/94‑1 (MQ=60)
TAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGC > SRR4302533.3753367/1‑94 (MQ=60)
ATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTT > SRR4302533.6033564/1‑94 (MQ=60)
ATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTT < SRR4302533.2386260/94‑1 (MQ=60)
ATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTT < SRR4302533.474312/94‑1 (MQ=60)
ATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATAAATAACACGAGCTT > SRR4302533.2236456/1‑94 (MQ=60)
ATCCGGTCAGCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTT < SRR4302533.1409299/94‑1 (MQ=60)
TCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTG > SRR4302533.1377525/1‑94 (MQ=60)
CGGTCATCGCGTCATGGTGAGCAGCATGTTCCACCTGCCCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTC < SRR4302533.129602/94‑1 (MQ=60)
ggccagcggaTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCG < SRR4302533.5599437/84‑1 (MQ=60)
GTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCAGAATACATAACACGAGCTTGTCGC > SRR4302533.1288774/1‑94 (MQ=60)
CATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCA > SRR4302533.436516/1‑94 (MQ=60)
CATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCA > SRR4302533.3873661/1‑94 (MQ=60)
ATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCAT > SRR4302533.2834579/1‑94 (MQ=60)
TCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATA < SRR4302533.2063066/94‑1 (MQ=60)
GCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAA < SRR4302533.2930372/94‑1 (MQ=60)
CGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAAT > SRR4302533.1033027/1‑94 (MQ=60)
GTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATT > SRR4302533.2834633/1‑94 (MQ=60)
TCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTT > SRR4302533.1701421/1‑94 (MQ=60)
TCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTT > SRR4302533.4531874/1‑94 (MQ=60)
TCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTT > SRR4302533.4975844/1‑94 (MQ=60)
TCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTT > SRR4302533.3275564/1‑94 (MQ=60)
CATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTC > SRR4302533.5860324/1‑94 (MQ=60)
CATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTC > SRR4302533.6279487/1‑94 (MQ=60)
CATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTC < SRR4302533.2481887/94‑1 (MQ=60)
CATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTC > SRR4302533.1424737/1‑94 (MQ=60)
CATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGGAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTC > SRR4302533.5055182/1‑94 (MQ=60)
TGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAA < SRR4302533.4623460/94‑1 (MQ=60)
TGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAA < SRR4302533.4872/94‑1 (MQ=60)
GGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAAT < SRR4302533.6273430/94‑1 (MQ=60)
GGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAAT > SRR4302533.5694911/1‑94 (MQ=60)
GTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATC > SRR4302533.4911214/1‑94 (MQ=60)
GTGAGCAGCATGTTCCAGCTGCTCATCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATC < SRR4302533.2355221/94‑1 (MQ=60)
TGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCG > SRR4302533.2134681/1‑94 (MQ=60)
GCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTC < SRR4302533.4077559/94‑1 (MQ=60)
AGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCG > SRR4302533.5029269/1‑94 (MQ=60)
CATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGC > SRR4302533.2037183/1‑94 (MQ=60)
CATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGC > SRR4302533.5223086/1‑94 (MQ=60)
ttacaaaatcctcccCCAGCCATTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATA < SRR4302533.151575/79‑1 (MQ=60)
GTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATA < SRR4302533.2340962/94‑1 (MQ=60)
TTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAG < SRR4302533.3454341/94‑1 (MQ=60)
TTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAG < SRR4302533.1724959/94‑1 (MQ=60)
TCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGG > SRR4302533.1273117/1‑94 (MQ=60)
TCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGG < SRR4302533.3015987/94‑1 (MQ=60)
TCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGG > SRR4302533.4540553/1‑94 (MQ=60)
CCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGT < SRR4302533.394213/94‑1 (MQ=60)
CAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTC > SRR4302533.60273/1‑94 (MQ=60)
AGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCT < SRR4302533.5446028/94‑1 (MQ=60)
AGCTGCTCCCCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCT < SRR4302533.1741389/94‑1 (MQ=60)
AGCTGCCCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCT < SRR4302533.1741388/94‑1 (MQ=60)
GCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTG > SRR4302533.1926639/1‑94 (MQ=60)
CTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGC > SRR4302533.3834627/1‑94 (MQ=60)
TGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCA > SRR4302533.5344031/1‑94 (MQ=60)
TGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCA > SRR4302533.5948798/1‑94 (MQ=60)
CTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACA > SRR4302533.2648048/1‑94 (MQ=60)
TCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACAT > SRR4302533.2138926/1‑94 (MQ=60)
CCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACAT < SRR4302533.3150221/94‑1 (MQ=60)
CCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATG < SRR4302533.1364193/94‑1 (MQ=60)
CCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATG < SRR4302533.1944787/94‑1 (MQ=60)
CCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATG > SRR4302533.798038/1‑94 (MQ=60)
CTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGA < SRR4302533.2773883/94‑1 (MQ=60)
CTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGA > SRR4302533.115242/1‑94 (MQ=60)
CTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGA > SRR4302533.4276061/1‑94 (MQ=60)
TCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGAC > SRR4302533.355951/1‑94 (MQ=60)
TCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGAC < SRR4302533.1004428/94‑1 (MQ=60)
AGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAG > SRR4302533.5596738/1‑94 (MQ=60)
AGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGACGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAG < SRR4302533.4333534/94‑1 (MQ=60)
GCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGT < SRR4302533.4864548/94‑1 (MQ=60)
GCCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGT < SRR4302533.5353840/94‑1 (MQ=60)
CCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGCGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTC > SRR4302533.1155753/1‑94 (MQ=60)
CCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTC > SRR4302533.2274453/1‑94 (MQ=60)
CCGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCCTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTC < SRR4302533.3635563/94‑1 (MQ=60)
CGTTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCG > SRR4302533.4050814/1‑94 (MQ=60)
TTTTTGCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAA > SRR4302533.3289258/1‑94 (MQ=60)
GCTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATC < SRR4302533.5290853/94‑1 (MQ=60)
CTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCC < SRR4302533.3591266/94‑1 (MQ=60)
CTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCC < SRR4302533.1860069/94‑1 (MQ=60)
CTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCC > SRR4302533.1597685/1‑94 (MQ=60)
CTCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCC < SRR4302533.2729857/94‑1 (MQ=60)
TCAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGCCTGCACATGACGAGTCGAACCATCCG > SRR4302533.1998797/1‑94 (MQ=60)
CAGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGC > SRR4302533.2950285/1‑94 (MQ=60)
AGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCGCATGACGAGTCGAACCATCCGCC < SRR4302533.2401791/94‑1 (MQ=60)
AGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCC > SRR4302533.4246887/1‑94 (MQ=60)
AGTAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATACGCC > SRR4302533.246600/1‑94 (MQ=60)
ATAATATCATCCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCA < SRR4302533.1430708/94‑1 (MQ=60)
TAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAG < SRR4302533.4882081/94‑1 (MQ=60)
TAATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAG > SRR4302533.3689884/1‑94 (MQ=60)
AATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGT > SRR4302533.4053246/1‑94 (MQ=60)
ATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTT < SRR4302533.6003522/94‑1 (MQ=60)
ATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTT > SRR4302533.4253031/1‑94 (MQ=60)
ATATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTT > SRR4302533.5417785/1‑94 (MQ=60)
TATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTT < SRR4302533.290989/94‑1 (MQ=60)
TATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTT < SRR4302533.1083464/94‑1 (MQ=60)
TATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTT > SRR4302533.3810162/1‑94 (MQ=60)
TATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTCT > SRR4302533.2534359/1‑94 (MQ=60)
ATCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTA < SRR4302533.2673258/94‑1 (MQ=60)
TCATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTAT < SRR4302533.2198448/94‑1 (MQ=60)
ATGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGA < SRR4302533.848733/94‑1 (MQ=60)
TGCACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAA > SRR4302533.2657516/1‑94 (MQ=60)
CACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACA > SRR4302533.1973791/1‑94 (MQ=60)
ACAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAA > SRR4302533.3143049/1‑94 (MQ=60)
CAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAA > SRR4302533.5073600/1‑94 (MQ=60)
CAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAA < SRR4302533.5637424/94‑1 (MQ=60)
CAATACATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAA > SRR4302533.5073599/1‑94 (MQ=60)
CATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCA < SRR4302533.3989161/94‑1 (MQ=60)
CATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCA > SRR4302533.5699026/1‑94 (MQ=60)
ATAACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAA > SRR4302533.6257388/1‑94 (MQ=60)
AACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAG < SRR4302533.2821063/94‑1 (MQ=60)
ACACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGG > SRR4302533.4893370/1‑94 (MQ=60)
CACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGT > SRR4302533.1778283/1‑94 (MQ=60)
CACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGT < SRR4302533.6233379/94‑1 (MQ=60)
CACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGT < SRR4302533.4866539/94‑1 (MQ=60)
ACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTT < SRR4302533.5725009/94‑1 (MQ=60)
ACGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTT < SRR4302533.5339623/94‑1 (MQ=60)
CGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTT < SRR4302533.1311743/94‑1 (MQ=60)
CGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTT < SRR4302533.1154148/94‑1 (MQ=60)
CGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTT > SRR4302533.5342892/1‑94 (MQ=60)
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TCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTT > NC_000913/1405033‑1405219
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
