Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,419,658 |
C→T |
P172P (CCC→CCT) |
ydaU → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,419,658 | 0 | C | T | 100.0%
| 731.0
/ NA
| 198 | P172P (CCC→CCT) | ydaU | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (100/98); total (100/98) |
Only 100 of 209 total aligned reads displayed.
TGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTG > NC_000913/1419568‑1419747
|
tgtTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGAtcctcc < 1:1781017/93‑1 (MQ=255)
cAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTa > 1:845703/1‑93 (MQ=255)
aaCAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTaaa > 2:4965137/1‑93 (MQ=255)
aaCAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTaaa > 2:3439769/1‑93 (MQ=255)
aGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATcc > 2:5832249/1‑93 (MQ=255)
aGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATcc < 1:1580168/93‑1 (MQ=255)
gATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATccc > 2:2266627/1‑93 (MQ=255)
aTGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATcccc > 1:1796732/1‑93 (MQ=255)
aTGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATcccc > 1:2652100/1‑93 (MQ=255)
aTGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATcccc < 2:4344831/93‑1 (MQ=255)
gTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATctcccc > 2:4177624/1‑93 (MQ=255)
gTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATcccccc < 2:909308/93‑1 (MQ=255)
aaGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCggg < 1:3564180/93‑1 (MQ=255)
gtggtgTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCggggg > 1:5394864/1‑93 (MQ=255)
ggtgTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGac > 2:5525411/1‑92 (MQ=255)
ggtgTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGaa < 1:3594919/93‑1 (MQ=255)
ggtgTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGaa > 1:388799/1‑93 (MQ=255)
ggtgTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGaa < 1:4293400/93‑1 (MQ=255)
ggtgTGTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAAGCCCCCCCGGGGGaa < 2:1961776/93‑1 (MQ=255)
gtgtTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAAt < 1:1378576/93‑1 (MQ=255)
tgtTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATc > 1:4954112/1‑93 (MQ=255)
tgtTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATc < 1:387151/93‑1 (MQ=255)
tttGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGa > 1:4093402/1‑93 (MQ=255)
tttGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGa < 1:5716816/93‑1 (MQ=255)
tGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAgg < 1:286132/93‑1 (MQ=255)
tGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAgg < 1:5214775/93‑1 (MQ=255)
aaCATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGgtg < 2:1013728/93‑1 (MQ=255)
cATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGGGTc > 1:3999273/1‑93 (MQ=255)
atgatgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCa < 2:673975/93‑1 (MQ=255)
atgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCaaaa > 2:1203203/1‑93 (MQ=255)
tgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCaaaaa < 2:367737/93‑1 (MQ=255)
tgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCaaaaa > 2:35682/1‑93 (MQ=255)
tgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCaaaaa < 1:2007954/93‑1 (MQ=255)
tgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCaaaaa > 1:2132803/1‑93 (MQ=255)
cAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGtt > 1:3374187/1‑93 (MQ=255)
aaCACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGttt > 1:5629674/1‑93 (MQ=255)
acacAAAGGCAACTAATAAAGATAGAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTg < 1:5041188/93‑1 (MQ=255)
acacAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTg > 2:6237010/1‑93 (MQ=255)
acaAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGAc > 1:3705941/1‑93 (MQ=255)
acaAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGAc < 1:2539614/93‑1 (MQ=255)
acaAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGAc < 2:184271/93‑1 (MQ=255)
caAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGAcc < 2:3059329/93‑1 (MQ=255)
caAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGAcc < 2:842394/93‑1 (MQ=255)
cAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTgg > 2:2832612/1‑93 (MQ=255)
cAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTgg < 1:693518/93‑1 (MQ=255)
aaCTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGa > 2:379121/1‑93 (MQ=255)
aaCTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGa < 2:4264954/93‑1 (MQ=255)
aaCTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGa < 1:3818188/93‑1 (MQ=255)
aCTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGat > 2:5375811/1‑93 (MQ=255)
taataaAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGatat < 1:5351329/93‑1 (MQ=255)
aataaAGATACGGATAAAAATCTAAAAACAAATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATAtt < 2:1903077/93‑1 (MQ=255)
aataaAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATAtt < 1:126424/93‑1 (MQ=255)
taaAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTAc > 2:2604947/1‑93 (MQ=255)
taaAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTAc > 1:4170891/1‑93 (MQ=255)
taaAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTAc > 2:2470763/1‑93 (MQ=255)
aaaaGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTAc < 2:4545281/92‑1 (MQ=255)
aaaGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTCCt > 2:1627435/1‑93 (MQ=255)
aaaGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACt < 1:822854/93‑1 (MQ=255)
aaaGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACt > 1:1802700/1‑93 (MQ=255)
aaaGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACt < 2:1466668/93‑1 (MQ=255)
aaaGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACt < 2:4560020/93‑1 (MQ=255)
aaGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACtt < 1:1586906/93‑1 (MQ=255)
aaGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACtt < 1:1870119/93‑1 (MQ=255)
aGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACttt < 1:2350859/93‑1 (MQ=255)
aGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACttt < 2:612909/93‑1 (MQ=255)
gATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCTCCCCCGGGGGAATCGAGGTGTCAACAAGTTTGACCCTCTGGATATTACTTTg > 2:5135439/1‑93 (MQ=255)
gATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTg < 2:5475761/93‑1 (MQ=255)
gATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTg < 1:1298823/93‑1 (MQ=255)
gATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTg > 1:1493414/1‑93 (MQ=255)
gATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTg > 1:3112690/1‑93 (MQ=255)
gATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCACCCCCGGGGGAATCGAGGAGTCACAAAGTTTGAACCTCTGGATATTACTTTg > 2:3262582/1‑93 (MQ=255)
tACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGcc < 2:5325912/93‑1 (MQ=255)
tACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGcc > 2:4002977/1‑93 (MQ=255)
tACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGcc < 1:5477418/93‑1 (MQ=255)
cAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGa > 1:2938642/1‑93 (MQ=255)
gATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAAc < 2:4195442/93‑1 (MQ=255)
gATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAAc < 1:2782774/93‑1 (MQ=255)
tAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTg < 2:4112846/93‑1 (MQ=255)
tAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTg > 1:552885/1‑93 (MQ=255)
tAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTg < 1:4575883/93‑1 (MQ=255)
tAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTg < 2:631272/93‑1 (MQ=255)
aaaGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTgg < 2:2191377/93‑1 (MQ=255)
aaaGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTgg > 2:294524/1‑93 (MQ=255)
aaaGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTgg < 2:3494469/93‑1 (MQ=255)
aaGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGa > 2:1043624/1‑93 (MQ=255)
aaGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGa > 2:5107143/1‑93 (MQ=255)
aaGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGATGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGa > 1:2400013/1‑93 (MQ=255)
aGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGAt < 2:520124/93‑1 (MQ=255)
aGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGAt < 2:3939306/93‑1 (MQ=255)
tCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAATTGGATTTc > 1:1068616/1‑93 (MQ=255)
tCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTc > 1:6088138/1‑93 (MQ=255)
tAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTg > 2:4685159/1‑93 (MQ=255)
tAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTg > 2:4614989/1‑93 (MQ=255)
tAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTg > 2:1417154/1‑93 (MQ=255)
tAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTg < 1:1222588/93‑1 (MQ=255)
aaaCAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGCAGTTCTGtct > 1:4709202/1‑93 (MQ=255)
cAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGc < 2:5144471/93‑1 (MQ=255)
gATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCtt < 1:5922082/93‑1 (MQ=255)
tcctccCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTg > 2:4363683/1‑93 (MQ=255)
tcctccCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTg > 1:2506196/1‑93 (MQ=255)
|
TGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTG > NC_000913/1419568‑1419747
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTG > NC_000913/1419565‑1419747
|
AGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCT < SRR4302533.673262/94‑1 (MQ=60)
AGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCT > SRR4302533.2827268/1‑94 (MQ=60)
GTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCC < SRR4302533.1359666/94‑1 (MQ=60)
GTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCC < SRR4302533.4758931/94‑1 (MQ=60)
TGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCC < SRR4302533.1791856/94‑1 (MQ=60)
TTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCT > SRR4302533.875811/1‑94 (MQ=60)
TTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCT > SRR4302533.5999422/1‑94 (MQ=60)
TCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTA > SRR4302533.850651/1‑94 (MQ=60)
TCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTA < SRR4302533.3745743/94‑1 (MQ=60)
CAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAA > SRR4302533.344099/1‑94 (MQ=60)
AACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAAT < SRR4302533.1999068/94‑1 (MQ=60)
AACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAAT > SRR4302533.3856049/1‑94 (MQ=60)
AGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCC < SRR4302533.1589686/94‑1 (MQ=60)
GATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCC > SRR4302533.390778/1‑94 (MQ=60)
GATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCC > SRR4302533.1807666/1‑94 (MQ=60)
GATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCC > SRR4302533.5739099/1‑94 (MQ=60)
GATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCC > SRR4302533.2668395/1‑94 (MQ=60)
TGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCC < SRR4302533.238884/94‑1 (MQ=60)
TTGAAGTCGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCG < SRR4302533.1259318/94‑1 (MQ=60)
AAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGG > SRR4302533.4271899/1‑94 (MQ=60)
AAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGG < SRR4302533.3586144/94‑1 (MQ=60)
AGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGG > SRR4302533.5427283/1‑94 (MQ=60)
TGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAA > SRR4302533.391146/1‑94 (MQ=60)
GGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAAT < SRR4302533.3617037/94‑1 (MQ=60)
GGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAAT < SRR4302533.4319223/94‑1 (MQ=60)
GGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAAT < SRR4302533.364550/94‑1 (MQ=60)
GGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAAT < SRR4302533.1832694/94‑1 (MQ=60)
GTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATC < SRR4302533.1386870/94‑1 (MQ=60)
GTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATC > SRR4302533.4984122/1‑94 (MQ=60)
TGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCG < SRR4302533.389486/94‑1 (MQ=60)
TGTTTCAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCG > SRR4302533.2865076/1‑94 (MQ=60)
GTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGA > SRR4302533.4118319/1‑94 (MQ=60)
TTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAG < SRR4302533.5851911/94‑1 (MQ=60)
TTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAG < SRR4302533.730117/94‑1 (MQ=60)
TTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAG < SRR4302533.5751342/94‑1 (MQ=60)
TGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGT < SRR4302533.5246176/94‑1 (MQ=60)
TGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGT < SRR4302533.287882/94‑1 (MQ=60)
GAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTG > SRR4302533.3986436/1‑94 (MQ=60)
AACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGT > SRR4302533.55919/1‑94 (MQ=60)
ACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTC < SRR4302533.3023009/94‑1 (MQ=60)
ACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGGGTC > SRR4302533.4023624/1‑94 (MQ=60)
ATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCACCCGGGGGAATCGAGGTGTCAA > SRR4302533.5789355/1‑94 (MQ=60)
ATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAA > SRR4302533.2145958/1‑94 (MQ=60)
TGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAG < SRR4302533.2020324/94‑1 (MQ=60)
TCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTT > SRR4302533.3395024/1‑94 (MQ=60)
TCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGAGGAATCGCGGTTTCAAAAAGTT > SRR4302533.2007755/1‑94 (MQ=60)
CAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTT > SRR4302533.5663718/1‑94 (MQ=60)
CAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTT < SRR4302533.2549098/94‑1 (MQ=60)
ACACAAAGGCAACTAATAAAGATAGAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGA < SRR4302533.5071699/94‑1 (MQ=60)
ACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGA > SRR4302533.4517646/1‑94 (MQ=60)
CACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGAC > SRR4302533.3728706/1‑94 (MQ=60)
ACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACC < SRR4302533.6135455/94‑1 (MQ=60)
ACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACC < SRR4302533.2555246/94‑1 (MQ=60)
CAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCC > SRR4302533.3192464/1‑94 (MQ=60)
CAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCC > SRR4302533.2463908/1‑94 (MQ=60)
AAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCT < SRR4302533.2571565/94‑1 (MQ=60)
AGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCT < SRR4302533.3588726/94‑1 (MQ=60)
GCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGG > SRR4302533.5337369/1‑94 (MQ=60)
CAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGA < SRR4302533.697617/94‑1 (MQ=60)
AACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGTATCGAGGTGTCAAAAAGTTTGACCCTCTGGAT > SRR4302533.4547367/1‑94 (MQ=60)
AACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGAT < SRR4302533.3841535/94‑1 (MQ=60)
CTAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATAT < SRR4302533.841845/94‑1 (MQ=60)
TAATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATT < SRR4302533.5383439/94‑1 (MQ=60)
AATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTA < SRR4302533.127213/94‑1 (MQ=60)
ATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTAC < SRR4302533.128479/94‑1 (MQ=60)
ATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTAC > SRR4302533.4037662/1‑94 (MQ=60)
ATAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTAC > SRR4302533.4196162/1‑94 (MQ=60)
TAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACT < SRR4302533.2951967/94‑1 (MQ=60)
TAAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACT > SRR4302533.1813672/1‑94 (MQ=60)
AAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTT < SRR4302533.827682/94‑1 (MQ=60)
AAAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTT < SRR4302533.181230/94‑1 (MQ=60)
AAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTT < SRR4302533.1881522/94‑1 (MQ=60)
AAGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTT < SRR4302533.1596473/94‑1 (MQ=60)
AGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTG < SRR4302533.2365403/94‑1 (MQ=60)
AGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTG > SRR4302533.1502418/1‑94 (MQ=60)
AGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTG < SRR4302533.3236441/94‑1 (MQ=60)
AGATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTG > SRR4302533.3131831/1‑94 (MQ=60)
GATACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGC < SRR4302533.1306639/94‑1 (MQ=60)
TACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCG < SRR4302533.5510433/94‑1 (MQ=60)
ACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGA > SRR4302533.2956597/1‑94 (MQ=60)
ACAGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGA < SRR4302533.4680234/94‑1 (MQ=60)
AGATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAAC < SRR4302533.1793863/94‑1 (MQ=60)
GATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTTTGGATATTACTTTGCCGAACT > SRR4302533.1502095/1‑94 (MQ=60)
GATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACT < SRR4302533.2799870/94‑1 (MQ=60)
GATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACT > SRR4302533.5492661/1‑94 (MQ=60)
ATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTG > SRR4302533.5528517/1‑94 (MQ=60)
ATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTG > SRR4302533.556161/1‑94 (MQ=60)
ATAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTG > SRR4302533.2259798/1‑94 (MQ=60)
TAAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGG < SRR4302533.4603611/94‑1 (MQ=60)
AAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGA < SRR4302533.1595214/94‑1 (MQ=60)
AAAGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGATGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGA > SRR4302533.2414833/1‑94 (MQ=60)
AGATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATT > SRR4302533.2778581/1‑94 (MQ=60)
ATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAATTGGATTTC > SRR4302533.1074908/1‑94 (MQ=60)
ATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGCTTTC > SRR4302533.505505/1‑94 (MQ=60)
ATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTC > SRR4302533.6124940/1‑94 (MQ=60)
ATCTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTC > SRR4302533.1349366/1‑94 (MQ=60)
CTAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTG > SRR4302533.1636118/1‑94 (MQ=60)
TAAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGT < SRR4302533.1229919/94‑1 (MQ=60)
AAAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTC < SRR4302533.4160298/94‑1 (MQ=60)
AAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCT > SRR4302533.2098874/1‑94 (MQ=60)
AAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCT < SRR4302533.5185911/94‑1 (MQ=60)
AAAACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGCAGTTCTGTCT > SRR4302533.4737744/1‑94 (MQ=60)
AACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCG > SRR4302533.5384055/1‑94 (MQ=60)
ACAGATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGC > SRR4302533.1541730/1‑94 (MQ=60)
GATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTT < SRR4302533.5957878/94‑1 (MQ=60)
ATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTG > SRR4302533.4948775/1‑94 (MQ=60)
ATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTG > SRR4302533.2521647/1‑94 (MQ=60)
ATCCTCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTG > SRR4302533.1226200/1‑94 (MQ=60)
|
AGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTG > NC_000913/1419565‑1419747
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
