Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,451,383 |
T→C |
D95G (GAC→GGC) |
maoC ← |
putative aldehyde dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,451,383 | 0 | T | C | 99.5%
| 607.6
/ ‑5.1
| 192 | D95G (GAC→GGC) | maoC | putative aldehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (88/103); total (88/104) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 |
Only 100 of 205 total aligned reads displayed.
GGCCACAGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGTCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATCGCC > NC_000913/1451293‑1451472
|
gCCACAGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTg > 2:5422040/1‑93 (MQ=255)
gCCACAGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTg > 2:4673338/1‑93 (MQ=255)
gCCACAGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTg < 2:5881731/93‑1 (MQ=255)
ccACAGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAActgcctgc < 1:1820548/93‑1 (MQ=255)
cacaGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACtgcctgcc > 1:5527491/1‑93 (MQ=255)
cacaGCATATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACtgcctgcc < 2:1346081/93‑1 (MQ=255)
acaGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGccc > 2:871066/1‑93 (MQ=255)
caGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCcg > 1:2952639/1‑93 (MQ=255)
aGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCcgc < 1:3096480/93‑1 (MQ=255)
gCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCcgcg > 2:898104/1‑93 (MQ=255)
gCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCcgcg > 2:1312616/1‑93 (MQ=255)
cGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGt < 2:1585485/93‑1 (MQ=255)
gTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGtt < 1:224516/93‑1 (MQ=255)
aTCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTgc < 2:5136694/93‑1 (MQ=255)
tCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTgcg > 1:2899301/1‑93 (MQ=255)
tCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTgcg > 1:179622/1‑93 (MQ=255)
tCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCt > 2:5503832/1‑93 (MQ=255)
aGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTTCGCCTGt > 1:733138/1‑93 (MQ=255)
aGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGt < 1:3674192/93‑1 (MQ=255)
aGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGt < 1:3903444/93‑1 (MQ=255)
ggCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGtt > 1:1556204/1‑93 (MQ=255)
cAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTg < 2:3866181/93‑1 (MQ=255)
cgCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTgc < 2:4511066/92‑1 (MQ=255)
cccGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAg > 1:2386905/1‑93 (MQ=255)
ccGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGa < 1:566660/93‑1 (MQ=255)
cGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGaa > 2:3971041/1‑93 (MQ=255)
ggCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGaaa < 1:5550380/93‑1 (MQ=255)
ggCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGaaa < 2:5823648/93‑1 (MQ=255)
cTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAaga > 2:4423008/1‑93 (MQ=255)
tACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAagag < 2:2442126/93‑1 (MQ=255)
tACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAagag < 2:236267/93‑1 (MQ=255)
gAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATa > 2:6031532/1‑93 (MQ=255)
gAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATa < 2:669158/93‑1 (MQ=255)
gCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGaa < 1:1880354/93‑1 (MQ=255)
cTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGaaa < 1:6189653/93‑1 (MQ=255)
tGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAAc > 2:3151036/1‑93 (MQ=255)
gtaagtaaATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGctc > 1:786017/1‑93 (MQ=255)
gtaagtaaATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGctc < 2:3142087/93‑1 (MQ=255)
taagtaaATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGctct < 1:3549481/93‑1 (MQ=255)
gtaaATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGACAGAGCATAGAAACGCTCtttt > 1:4012786/1‑93 (MQ=255)
gtaaATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCtttt < 2:3787156/93‑1 (MQ=255)
gtaaATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCtttt < 2:4258531/93‑1 (MQ=255)
gtaaATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCtttt > 1:1413717/1‑93 (MQ=255)
taaATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCttttt < 2:3898741/93‑1 (MQ=255)
taaATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCttttt < 2:1570693/93‑1 (MQ=255)
taaATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCttttt < 1:1336815/93‑1 (MQ=255)
taaATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCttttt < 2:1843781/93‑1 (MQ=255)
aaaTAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTc < 2:5279517/93‑1 (MQ=255)
aTAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCAc < 1:5341580/93‑1 (MQ=255)
aaCGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTc > 2:213569/1‑93 (MQ=255)
aaCGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTc < 2:3280615/93‑1 (MQ=255)
aaCGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTc < 2:2831410/93‑1 (MQ=255)
aaCGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTc > 1:4192426/1‑93 (MQ=255)
aaCGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTc < 2:5955747/93‑1 (MQ=255)
gTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTcagc > 2:417676/1‑93 (MQ=255)
gTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTcagc > 1:2756436/1‑93 (MQ=255)
tCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTcagca > 1:5067809/1‑93 (MQ=255)
tCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTcagca > 2:2855976/1‑93 (MQ=255)
tCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTATTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTcagca < 1:3377345/93‑1 (MQ=255)
cccAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTcagcag > 2:4565036/1‑93 (MQ=255)
cccAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTcagcag < 1:1184292/93‑1 (MQ=255)
cccAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTcagcag < 1:4454362/93‑1 (MQ=255)
ccAATGCCACCTTCAATATCAACCCATCTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCCCTCAGCAGa < 1:1222698/93‑1 (MQ=255)
ccAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGa < 1:2014617/93‑1 (MQ=255)
ccAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGa < 2:4862398/93‑1 (MQ=255)
cAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGAt < 2:5377630/93‑1 (MQ=255)
aaTGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATg > 2:2595539/1‑93 (MQ=255)
aaTGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATg < 1:4846287/93‑1 (MQ=255)
aaTGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATg > 2:4635275/1‑93 (MQ=255)
aaTGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATg < 2:1647597/93‑1 (MQ=255)
aTGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGt < 1:1083323/93‑1 (MQ=255)
tGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGtt < 1:1987691/93‑1 (MQ=255)
tGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGtt < 2:359617/93‑1 (MQ=255)
ccACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTa < 1:5843883/93‑1 (MQ=255)
cACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAg > 2:3339462/1‑93 (MQ=255)
aCCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGc > 1:2125725/1‑93 (MQ=255)
aCCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGc > 2:3522009/1‑93 (MQ=255)
aCCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGc < 1:5182394/93‑1 (MQ=255)
tCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGAcc < 2:1495932/93‑1 (MQ=255)
tCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGAcc > 2:3716546/1‑93 (MQ=255)
tCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGAcc < 2:4321246/93‑1 (MQ=255)
cAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGACAGAGCATAGAAACGCTCTTTTACACTCAGCAGATGTTTAGCGACCg < 2:6309801/93‑1 (MQ=255)
cAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCg > 2:1180946/1‑93 (MQ=255)
atatCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCt > 1:1917516/1‑93 (MQ=255)
tatCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCtt < 1:3990799/93‑1 (MQ=255)
atCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCttt < 2:2585353/93‑1 (MQ=255)
cAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTaa < 1:5881857/93‑1 (MQ=255)
aCCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGc > 1:5913102/1‑93 (MQ=255)
aCCCAACTCCCTGCCCGCGTTGCGCCTGTTTGCGCAGCAAGAGCATAGTAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTGAGc > 2:4928623/1‑93 (MQ=255)
ccAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCAt < 2:2710207/93‑1 (MQ=255)
ccAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCAt < 2:760651/93‑1 (MQ=255)
ccAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCAt > 2:1952336/1‑93 (MQ=255)
cAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATc > 1:3309322/1‑93 (MQ=255)
cAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATc > 2:4711672/1‑93 (MQ=255)
cAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATc > 1:5681574/1‑93 (MQ=255)
aCTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATcgc < 1:5591495/93‑1 (MQ=255)
aCTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATcgc > 2:6250857/1‑93 (MQ=255)
aCTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATcgc > 1:369835/1‑93 (MQ=255)
ctgcctgcCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATcgcc < 2:3032643/93‑1 (MQ=255)
ctgcctgcCCGCGTGGCGCCTGTTTGCGCAGAAACAGCATAGAACCGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATcgcc < 2:2427589/93‑1 (MQ=255)
|
GGCCACAGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGTCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATCGCC > NC_000913/1451293‑1451472
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGCCACAGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGTCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATCGCCGCAC > NC_000913/1451292‑1451476
|
CGGCCACAGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCT < SRR4302533.2180356/94‑1 (MQ=60)
CCACAGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCC < SRR4302533.1831669/94‑1 (MQ=60)
CCACAGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCC > SRR4302533.5560861/1‑94 (MQ=60)
ACAGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCG > SRR4302533.2970694/1‑94 (MQ=60)
AGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCG < SRR4302533.3115513/94‑1 (MQ=60)
GTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTG > SRR4302533.362418/1‑94 (MQ=60)
GTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTG < SRR4302533.3093134/94‑1 (MQ=60)
GTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTG < SRR4302533.225919/94‑1 (MQ=60)
ATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCG > SRR4302533.2917118/1‑94 (MQ=60)
ATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCG > SRR4302533.180746/1‑94 (MQ=60)
TCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTG < SRR4302533.4489632/94‑1 (MQ=60)
TCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTG < SRR4302533.5659922/94‑1 (MQ=60)
CAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTTCGCCTGT > SRR4302533.737449/1‑94 (MQ=60)
AGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTT < SRR4302533.3927285/94‑1 (MQ=60)
AGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTT < SRR4302533.3696775/94‑1 (MQ=60)
AGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTT > SRR4302533.1565571/1‑94 (MQ=60)
CAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGC < SRR4302533.1109914/94‑1 (MQ=60)
CTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCA > SRR4302533.5751815/1‑94 (MQ=60)
TCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAG < SRR4302533.3929739/94‑1 (MQ=60)
TCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAG > SRR4302533.2401653/1‑94 (MQ=60)
CCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGA > SRR4302533.1240764/1‑94 (MQ=60)
CCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAA < SRR4302533.570015/94‑1 (MQ=60)
GGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGTCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAG < SRR4302533.5943511/94‑1 (MQ=60)
GGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAG < SRR4302533.5583899/94‑1 (MQ=60)
CTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAG < SRR4302533.4910357/94‑1 (MQ=60)
TACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGC > SRR4302533.1976449/1‑94 (MQ=60)
TACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGC > SRR4302533.2918080/1‑94 (MQ=60)
TACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGC < SRR4302533.2251368/94‑1 (MQ=60)
TACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGC < SRR4302533.2306588/94‑1 (MQ=60)
GAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAG < SRR4302533.1902122/94‑1 (MQ=60)
GAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAG < SRR4302533.743643/94‑1 (MQ=60)
GGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAA > SRR4302533.5930097/1‑94 (MQ=60)
GCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAA < SRR4302533.1891807/94‑1 (MQ=60)
CTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAAC < SRR4302533.6226796/94‑1 (MQ=60)
CGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTC > SRR4302533.790637/1‑94 (MQ=60)
TAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGCACCGCTCTT > SRR4302533.2836165/1‑94 (MQ=60)
TAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTT < SRR4302533.3571350/94‑1 (MQ=60)
AAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTT > SRR4302533.1388309/1‑94 (MQ=60)
AGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGACAGAGCATAGAAACGCTCTTTT > SRR4302533.4037219/1‑94 (MQ=60)
AGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTT > SRR4302533.1422267/1‑94 (MQ=60)
AGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTT > SRR4302533.1870865/1‑94 (MQ=60)
ATAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTT < SRR4302533.3378320/94‑1 (MQ=60)
TAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTC < SRR4302533.1344836/94‑1 (MQ=60)
ATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACT < SRR4302533.5373613/94‑1 (MQ=60)
ATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACT > SRR4302533.5962635/1‑94 (MQ=60)
TAACGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTC > SRR4302533.4217801/1‑94 (MQ=60)
CGTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGC > SRR4302533.2773341/1‑94 (MQ=60)
GTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCA < SRR4302533.3710607/94‑1 (MQ=60)
GTCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCA > SRR4302533.5098414/1‑94 (MQ=60)
TCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAG < SRR4302533.640071/94‑1 (MQ=60)
TCCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTATTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAG < SRR4302533.3398196/94‑1 (MQ=60)
CCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGA < SRR4302533.1191401/94‑1 (MQ=60)
CCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGA > SRR4302533.1589096/1‑94 (MQ=60)
CCCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGA < SRR4302533.4481294/94‑1 (MQ=60)
CCAATGCCACCTTCAATATCAACCCATCTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCCCTCAGCAGAT < SRR4302533.1230029/94‑1 (MQ=60)
CCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGAT < SRR4302533.5530737/94‑1 (MQ=60)
CCAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGAT < SRR4302533.2027028/94‑1 (MQ=60)
CAATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATG < SRR4302533.4024753/94‑1 (MQ=60)
CATGCCACCTTCAATATCAGCCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGT < SRR4302533.86036/94‑1 (MQ=60)
AATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGT < SRR4302533.4875658/94‑1 (MQ=60)
ATGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTT < SRR4302533.1089713/94‑1 (MQ=60)
TGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTT < SRR4302533.1999849/94‑1 (MQ=60)
TGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTT > SRR4302533.428191/1‑94 (MQ=60)
TGCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTT > SRR4302533.1196395/1‑94 (MQ=60)
GCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTA < SRR4302533.2002942/94‑1 (MQ=60)
GCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTA < SRR4302533.5702119/94‑1 (MQ=60)
GCCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTA < SRR4302533.3374382/94‑1 (MQ=60)
CCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAG < SRR4302533.5879215/94‑1 (MQ=60)
CCACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAG < SRR4302533.3300071/94‑1 (MQ=60)
CACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGC > SRR4302533.14760/1‑94 (MQ=60)
CACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGC > SRR4302533.2138831/1‑94 (MQ=60)
ACCTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCG < SRR4302533.5213685/94‑1 (MQ=60)
CTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGAC > SRR4302533.5203541/1‑94 (MQ=60)
CTTCAATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGAC > SRR4302533.260011/1‑94 (MQ=60)
AATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCT > SRR4302533.1929224/1‑94 (MQ=60)
AATATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCT > SRR4302533.1818998/1‑94 (MQ=60)
TATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTT < SRR4302533.4015103/94‑1 (MQ=60)
ATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTA > SRR4302533.556994/1‑94 (MQ=60)
ATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTA > SRR4302533.3787279/1‑94 (MQ=60)
ATCAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTA > SRR4302533.2069137/1‑94 (MQ=60)
CAACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAG < SRR4302533.5917405/94‑1 (MQ=60)
AACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGC > SRR4302533.5948833/1‑94 (MQ=60)
ACCCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCA < SRR4302533.5611279/94‑1 (MQ=60)
CCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGATCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATC < SRR4302533.5330666/94‑1 (MQ=60)
CCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATC > SRR4302533.5715891/1‑94 (MQ=60)
CCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATC > SRR4302533.3329758/1‑94 (MQ=60)
CCAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATC < SRR4302533.4045640/94‑1 (MQ=60)
CAACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATCG > SRR4302533.351980/1‑94 (MQ=60)
AACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATCGC > SRR4302533.372068/1‑94 (MQ=60)
ACTGCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATCGCC < SRR4302533.5625273/94‑1 (MQ=60)
GCCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATCGCCGCA > SRR4302533.1635276/1‑94 (MQ=60)
CCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATCGCCGCAC < SRR4302533.5724242/94‑1 (MQ=60)
|
CGGCCACAGCGTATCGTCAGGCAGCTCCCGGCTACCGAGGCTGGCGTAAGTAAATAACGTCCCAATGCCACCTTCAATATCAACCCAACTGTCTGCCCGCGTTGCGCCTGTTTGCGCAGAAAGAGCATAGAAACGCTCTTTTTCACTCAGCAGATGTTTAGCGACCGCTTTAAGCATCGCCGCAC > NC_000913/1451292‑1451476
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
