Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,461,082 |
C→T |
P312S (CCA→TCA) |
b1398 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,461,082 | 0 | C | T | 100.0%
| 806.0
/ NA
| 220 | P312S (CCA→TCA) | b1398 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (129/91); total (129/91) |
Only 100 of 226 total aligned reads displayed.
GGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTACCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCG > NC_000913/1460992‑1461171
|
ggTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCa > 1:5358489/1‑93 (MQ=255)
tGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGCTTTAACCCGACTGTTATCAgg > 1:1209997/1‑93 (MQ=255)
gAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGa > 1:3099436/1‑93 (MQ=255)
aaCATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGaa < 2:1916627/93‑1 (MQ=255)
aaCATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGaa > 1:2989283/1‑93 (MQ=255)
aaCATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGaa < 2:349935/93‑1 (MQ=255)
aaCATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGaa > 2:2879309/1‑93 (MQ=255)
aTGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACgg > 1:531278/1‑93 (MQ=255)
aTGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACgg < 1:1046679/93‑1 (MQ=255)
ggCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGgcg > 2:4433951/1‑93 (MQ=255)
gCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGgcgc > 2:1208249/1‑93 (MQ=255)
gCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGgcgc < 2:1290559/93‑1 (MQ=255)
aCTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGAc > 2:401678/1‑93 (MQ=255)
tGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTa > 2:423538/1‑93 (MQ=255)
tGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTa > 1:4862926/1‑93 (MQ=255)
gTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTAt < 1:3910018/93‑1 (MQ=255)
ttATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATg > 2:3130270/1‑93 (MQ=255)
ttATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATg > 1:1467336/1‑93 (MQ=255)
aTTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGCCTATgcg > 1:1893841/1‑93 (MQ=255)
aTTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATgcg > 1:1854367/1‑93 (MQ=255)
aTTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATgcg > 2:5237305/1‑93 (MQ=255)
ccacGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCa < 1:440036/93‑1 (MQ=255)
gCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGa < 2:3170142/93‑1 (MQ=255)
gCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGa > 2:6036684/1‑93 (MQ=255)
gCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGa < 1:2929462/93‑1 (MQ=255)
gCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGa > 1:2286131/1‑93 (MQ=255)
cTGACCAAAGAAGCATTGCCGGTCATTCGTGACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGAt < 1:661117/93‑1 (MQ=255)
tGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATc > 1:5457972/1‑93 (MQ=255)
gACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCg > 2:2359106/1‑93 (MQ=255)
aCCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGc > 2:4150042/1‑93 (MQ=255)
aCCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGc > 2:4752490/1‑93 (MQ=255)
aCCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGc < 1:5733550/93‑1 (MQ=255)
ccAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCa > 2:4204821/1‑93 (MQ=255)
ccAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCa > 2:5473755/1‑93 (MQ=255)
aaaGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATc > 2:3012444/1‑93 (MQ=255)
aaaGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATc < 1:6013839/93‑1 (MQ=255)
aaaGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATc > 1:2239864/1‑93 (MQ=255)
agaagCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAg < 2:2757039/93‑1 (MQ=255)
agaagCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAg > 2:4103537/1‑93 (MQ=255)
aagCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCg < 1:921540/93‑1 (MQ=255)
aagCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCg < 2:5982205/93‑1 (MQ=255)
agCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCgg > 2:572898/1‑93 (MQ=255)
agCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCgg > 2:5546496/1‑93 (MQ=255)
ttGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGc > 2:85010/1‑93 (MQ=255)
ttGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGc > 2:377921/1‑93 (MQ=255)
tGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCa < 2:2211745/93‑1 (MQ=255)
gCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAg < 2:2791352/93‑1 (MQ=255)
ccGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGc > 1:5812232/1‑93 (MQ=255)
ccGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGc < 1:493849/93‑1 (MQ=255)
cGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCg > 1:4183580/1‑93 (MQ=255)
gTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGAt > 2:5799668/1‑93 (MQ=255)
gTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGAt > 1:3678941/1‑93 (MQ=255)
cATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGa > 1:5571768/1‑93 (MQ=255)
ttCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACa < 1:1378247/93‑1 (MQ=255)
tCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACAt < 2:6107915/93‑1 (MQ=255)
tCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACAt < 2:4959059/93‑1 (MQ=255)
cGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATg < 2:2440226/93‑1 (MQ=255)
gTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGt > 2:3945401/1‑93 (MQ=255)
ttACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGtt > 2:730608/1‑93 (MQ=255)
tACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGtta > 1:3616739/1‑92 (MQ=255)
tACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTg < 2:356573/93‑1 (MQ=255)
tACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTg < 2:680856/93‑1 (MQ=255)
aCCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGa > 2:3331980/1‑93 (MQ=255)
ccGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGat < 2:1567903/93‑1 (MQ=255)
cGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGatt > 2:2084761/1‑93 (MQ=255)
cGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGatt > 1:3786853/1‑93 (MQ=255)
gCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGatta < 1:2803963/93‑1 (MQ=255)
gCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGatta < 2:3299286/93‑1 (MQ=255)
gCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGatta > 2:1455966/1‑93 (MQ=255)
gCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAACGGACGCAGCGATGACATGTTGatta > 2:5090771/1‑93 (MQ=255)
cACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGattat < 1:3284216/93‑1 (MQ=255)
aCGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGattatt > 1:3101036/1‑93 (MQ=255)
aCGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGattatt < 2:4890955/93‑1 (MQ=255)
cgcgTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTc < 1:4763233/93‑1 (MQ=255)
cgcgTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTc < 2:6307198/93‑1 (MQ=255)
cgTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTcgc < 2:2153822/93‑1 (MQ=255)
tGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCgg < 1:1718456/93‑1 (MQ=255)
tGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCgg > 1:2467428/1‑93 (MQ=255)
gATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGgt > 1:1569705/1‑93 (MQ=255)
aTTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGgtg < 1:619047/93‑1 (MQ=255)
tttAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGgtgt > 1:2374956/1‑93 (MQ=255)
tAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTaa < 2:1103507/93‑1 (MQ=255)
aaCCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTaaa > 2:793858/1‑93 (MQ=255)
aCCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGCTCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTaact > 1:675643/1‑91 (MQ=255)
aCCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAAt > 1:1581610/1‑93 (MQ=255)
aCCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAAt < 2:2038596/93‑1 (MQ=255)
ccGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAATTGt < 1:2891131/93‑1 (MQ=255)
ccGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGt > 2:1020977/1‑93 (MQ=255)
ccGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGCACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGt > 1:1068228/1‑93 (MQ=255)
cGACTGTTATCAGGAACGGCTCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTc < 1:1136075/93‑1 (MQ=255)
cGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTc < 1:5870404/93‑1 (MQ=255)
cGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTc > 2:4782783/1‑93 (MQ=255)
gACTGTTATCAGGAACGGCGCGTACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCt < 1:967237/93‑1 (MQ=255)
gACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCt < 2:1151353/93‑1 (MQ=255)
cTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCttt < 1:1995008/93‑1 (MQ=255)
tGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTc > 1:6260730/1‑93 (MQ=255)
tGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTc < 1:715140/93‑1 (MQ=255)
gTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTcc > 1:4305823/1‑93 (MQ=255)
gTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTcc > 2:1710719/1‑93 (MQ=255)
ttATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCg > 1:3192840/1‑93 (MQ=255)
|
GGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTACCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCG > NC_000913/1460992‑1461171
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATGGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTACCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCGTCAC > NC_000913/1460989‑1461175
|
GATGGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTAT > SRR4302533.1725554/1‑94 (MQ=60)
GATGGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTAT > SRR4302533.5143731/1‑94 (MQ=60)
ATGGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATC < SRR4302533.4482141/94‑1 (MQ=60)
TGGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCA > SRR4302533.6103514/1‑94 (MQ=60)
TGGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCA < SRR4302533.4517883/94‑1 (MQ=60)
TGGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCA > SRR4302533.5390656/1‑94 (MQ=60)
GGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAG > SRR4302533.2846233/1‑94 (MQ=60)
GTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGCTTTAACCCGACTGTTATCAGG > SRR4302533.1217263/1‑94 (MQ=60)
GTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGG > SRR4302533.626191/1‑94 (MQ=60)
TGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGA < SRR4302533.2081980/94‑1 (MQ=60)
TGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGA > SRR4302533.3118491/1‑94 (MQ=60)
GAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAA > SRR4302533.3007569/1‑94 (MQ=60)
AACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAAC > SRR4302533.1892148/1‑94 (MQ=60)
AACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAAC < SRR4302533.848502/94‑1 (MQ=60)
CATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGG > SRR4302533.534438/1‑94 (MQ=60)
CATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGG < SRR4302533.3734679/94‑1 (MQ=60)
ATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGC < SRR4302533.3212007/94‑1 (MQ=60)
ATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGC < SRR4302533.1052829/94‑1 (MQ=60)
TGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCG < SRR4302533.5634113/94‑1 (MQ=60)
CGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGG > SRR4302533.2771962/1‑94 (MQ=60)
GAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGA > SRR4302533.3119841/1‑94 (MQ=60)
CTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTA > SRR4302533.4892398/1‑94 (MQ=60)
TGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTAT < SRR4302533.2015120/94‑1 (MQ=60)
GTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATG < SRR4302533.3933897/94‑1 (MQ=60)
GTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATG > SRR4302533.1476184/1‑94 (MQ=60)
TATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGCCTATGCG > SRR4302533.1905403/1‑94 (MQ=60)
TATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCG > SRR4302533.1865674/1‑94 (MQ=60)
TCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCG > SRR4302533.1596113/1‑94 (MQ=60)
CCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCAT < SRR4302533.6341663/94‑1 (MQ=60)
CCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCAT < SRR4302533.4438683/94‑1 (MQ=60)
CCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCAT < SRR4302533.442662/94‑1 (MQ=60)
CACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATG > SRR4302533.3282589/1‑94 (MQ=60)
CACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATG > SRR4302533.5779047/1‑94 (MQ=60)
CGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGA > SRR4302533.2300280/1‑94 (MQ=60)
GCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGAT < SRR4302533.2947384/94‑1 (MQ=60)
CTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATC > SRR4302533.5490853/1‑94 (MQ=60)
CTGACCAAAGAAGCATTGCCGGTCATTCGTGACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATC < SRR4302533.665018/94‑1 (MQ=60)
GACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGC > SRR4302533.2277986/1‑94 (MQ=60)
ACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCA < SRR4302533.5768166/94‑1 (MQ=60)
CCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCAT < SRR4302533.1311916/94‑1 (MQ=60)
CAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATC < SRR4302533.3477421/94‑1 (MQ=60)
CAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATC > SRR4302533.1583829/1‑94 (MQ=60)
CAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATC > SRR4302533.959789/1‑94 (MQ=60)
CAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATC > SRR4302533.2253706/1‑94 (MQ=60)
AAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCA < SRR4302533.6050282/94‑1 (MQ=60)
AAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCA > SRR4302533.1931569/1‑94 (MQ=60)
AGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGC > SRR4302533.3007521/1‑94 (MQ=60)
AAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGG < SRR4302533.926950/94‑1 (MQ=60)
GCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGCCTGATATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCACCGGAC > SRR4302533.2704953/1‑94 (MQ=60)
GCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGC > SRR4302533.5847335/1‑94 (MQ=60)
CCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCG < SRR4302533.496795/94‑1 (MQ=60)
CCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCG > SRR4302533.4208914/1‑94 (MQ=60)
CGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGA > SRR4302533.1421353/1‑94 (MQ=60)
GGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGAT > SRR4302533.3701555/1‑94 (MQ=60)
GGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGAT > SRR4302533.3011445/1‑94 (MQ=60)
GGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGAT < SRR4302533.671928/94‑1 (MQ=60)
TCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGA < SRR4302533.1574059/94‑1 (MQ=60)
TCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGA > SRR4302533.713918/1‑94 (MQ=60)
TCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGA > SRR4302533.1204275/1‑94 (MQ=60)
TCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGA > SRR4302533.5333985/1‑94 (MQ=60)
TCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGA > SRR4302533.5605442/1‑94 (MQ=60)
CATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGAC > SRR4302533.6001610/1‑94 (MQ=60)
ATTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACA > SRR4302533.5822517/1‑94 (MQ=60)
TTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACAT < SRR4302533.1386540/94‑1 (MQ=60)
TTCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACAT < SRR4302533.2449009/94‑1 (MQ=60)
TCGTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATG < SRR4302533.1055710/94‑1 (MQ=60)
GTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTT > SRR4302533.1621225/1‑94 (MQ=60)
GTTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTT > SRR4302533.5345360/1‑94 (MQ=60)
TTACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTA > SRR4302533.3638989/1‑94 (MQ=60)
ACCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGAT > SRR4302533.3050359/1‑94 (MQ=60)
CCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATT > SRR4302533.3810041/1‑94 (MQ=60)
CCGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATT < SRR4302533.2934605/94‑1 (MQ=60)
CGCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTA > SRR4302533.4268130/1‑94 (MQ=60)
GCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTAT < SRR4302533.1782758/94‑1 (MQ=60)
GCACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTAT < SRR4302533.2821218/94‑1 (MQ=60)
CACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATT < SRR4302533.3304489/94‑1 (MQ=60)
CACGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATT > SRR4302533.3120098/1‑94 (MQ=60)
CGCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCG < SRR4302533.4792121/94‑1 (MQ=60)
GCGTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGC > SRR4302533.5415773/1‑94 (MQ=60)
GTGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGG > SRR4302533.2482647/1‑94 (MQ=60)
TGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGT > SRR4302533.1579161/1‑94 (MQ=60)
TGATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGT < SRR4302533.1728873/94‑1 (MQ=60)
GATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTG < SRR4302533.3423758/94‑1 (MQ=60)
ATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGT < SRR4302533.622683/94‑1 (MQ=60)
ATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGT < SRR4302533.2327571/94‑1 (MQ=60)
ATTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGT > SRR4302533.2389652/1‑94 (MQ=60)
TTTAACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTA > SRR4302533.5878841/1‑94 (MQ=60)
AACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGCTCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAACT > SRR4302533.679635/1‑94 (MQ=60)
AACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAAT > SRR4302533.1591137/1‑94 (MQ=60)
ACCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATG < SRR4302533.3921428/94‑1 (MQ=60)
CCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGT < SRR4302533.4933232/94‑1 (MQ=60)
CCCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGCACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGT > SRR4302533.1074514/1‑94 (MQ=60)
CCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAATTGTC < SRR4302533.2908900/94‑1 (MQ=60)
CCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTC < SRR4302533.5599788/94‑1 (MQ=60)
CCGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTC > SRR4302533.1107233/1‑94 (MQ=60)
CGACTGTTATCAGGAACGGCTCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCT < SRR4302533.1142829/94‑1 (MQ=60)
CGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCT > SRR4302533.3661059/1‑94 (MQ=60)
CGACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCT < SRR4302533.5905887/94‑1 (MQ=60)
GACTGTTATCAGGAGCGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTT < SRR4302533.4399262/94‑1 (MQ=60)
GACTGTTATCAGGAACGGCGCGTACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTT < SRR4302533.972910/94‑1 (MQ=60)
GACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTT > SRR4302533.6248152/1‑94 (MQ=60)
ACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTT < SRR4302533.769411/94‑1 (MQ=60)
ACTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTT > SRR4302533.4828199/1‑94 (MQ=60)
CTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTC < SRR4302533.2007251/94‑1 (MQ=60)
CTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTC > SRR4302533.6298160/1‑94 (MQ=60)
CTGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTC > SRR4302533.4762996/1‑94 (MQ=60)
TGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCC < SRR4302533.719359/94‑1 (MQ=60)
TGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCC < SRR4302533.3998707/94‑1 (MQ=60)
TGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCC < SRR4302533.1376091/94‑1 (MQ=60)
TGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCC > SRR4302533.4331732/1‑94 (MQ=60)
TGTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCC < SRR4302533.3927661/94‑1 (MQ=60)
GTTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCG > SRR4302533.3212480/1‑94 (MQ=60)
TTATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCGT < SRR4302533.5370048/94‑1 (MQ=60)
TATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCGTC > SRR4302533.2495416/1‑94 (MQ=60)
ATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCGTCA < SRR4302533.1153630/94‑1 (MQ=60)
ATCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCGTCA < SRR4302533.2897025/94‑1 (MQ=60)
TCAGGAACGGCGCGGACTATGCGCCGCATGTATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCGTCAC < SRR4302533.299652/94‑1 (MQ=60)
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GATGGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTACCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCGTCAC > NC_000913/1460989‑1461175
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
