Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,472,339 |
(C)6→7 |
coding (95/861 nt) |
ydbC → |
putative dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,472,333 | 1 | . | C | 98.6%
| 440.8
/ ‑1.0
| 140 | coding (89/861 nt) | ydbC | putative dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base C (65/73); total (65/75) |
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 |
Only 100 of 167 total aligned reads displayed.
TGCGATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑CCCCCCACGAGATCGCCACGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTA > NC_000913/1472241‑1472420
|
gATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑ccc > 2:1002567/1‑93 (MQ=255)
gATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑ccc > 2:4677888/1‑93 (MQ=255)
aTGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑cccc > 2:6115903/1‑93 (MQ=255)
aTGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTCG‑cccc > 2:806119/1‑93 (MQ=255)
tGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑ccccc > 2:2314851/1‑93 (MQ=255)
agcagcAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑ccccccc < 1:6245057/93‑2 (MQ=255)
agcagcAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑ccccccc > 2:3975697/1‑92 (MQ=255)
gcagcaATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTTGAGTTTTTGG‑ccccccca > 1:6055877/1‑91 (MQ=255)
gcagcaATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑ccccccca > 2:319828/1‑91 (MQ=255)
gcagcaATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑ccccccca > 1:2878488/1‑91 (MQ=255)
cagcaATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑cccccccac < 2:3373431/93‑4 (MQ=255)
agcaATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑cccccccacg < 1:234514/93‑5 (MQ=255)
agcaATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑cccccccacg > 1:4838492/1‑89 (MQ=255)
caATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACgag > 1:3521531/1‑93 (MQ=255)
aaTACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACgaga > 1:2686579/1‑93 (MQ=255)
aTACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGAt > 1:1005899/1‑93 (MQ=255)
aTACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGAt > 2:148983/1‑93 (MQ=255)
aTACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGAt < 2:3026842/93‑1 (MQ=255)
aTACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGAt < 2:2588171/93‑1 (MQ=255)
aTACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGAt < 2:6069680/93‑1 (MQ=255)
cATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGc < 1:2004417/93‑1 (MQ=255)
aTTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGcc > 1:1703225/1‑93 (MQ=255)
aTTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGcc > 1:5595603/1‑93 (MQ=255)
tttACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGccg > 2:485147/1‑92 (MQ=255)
tttACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGccg > 1:2568119/1‑92 (MQ=255)
tttACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGccg < 1:4543175/93‑2 (MQ=255)
aCTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCcgcgc > 2:4302160/1‑92 (MQ=255)
ctctCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTc > 2:667798/1‑93 (MQ=255)
tctcGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCg > 2:422128/1‑93 (MQ=255)
tctcGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCg > 2:1472714/1‑93 (MQ=255)
tcGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCt > 2:3842556/1‑93 (MQ=255)
tcGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCt > 2:5866379/1‑93 (MQ=255)
cGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCta < 1:2752817/93‑1 (MQ=255)
cGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCta < 1:2476766/93‑1 (MQ=255)
ggTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCtat > 2:4069966/1‑93 (MQ=255)
ggTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCtat > 1:5308121/1‑93 (MQ=255)
aCAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAAc > 2:506064/1‑93 (MQ=255)
aCAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAAc < 1:1380651/93‑1 (MQ=255)
cAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAAcc < 2:616934/93‑1 (MQ=255)
aaaaTCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCg > 1:680375/1‑93 (MQ=255)
aaaaTCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCg < 1:6113534/93‑1 (MQ=255)
aaaaTCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCg > 2:2318360/1‑93 (MQ=255)
aaTCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGtg > 1:4732056/1‑93 (MQ=255)
tCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGtgct < 1:3446510/93‑1 (MQ=255)
tCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGtgct < 1:3921124/93‑1 (MQ=255)
ccGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGtgctg < 2:1046529/93‑1 (MQ=255)
cGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGtgctgc < 1:2490490/93‑1 (MQ=255)
gTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCg < 2:5626054/93‑1 (MQ=255)
gTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCg < 1:102742/93‑1 (MQ=255)
aaCCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGa > 1:648837/1‑93 (MQ=255)
aaCCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGa < 2:4578497/93‑1 (MQ=255)
aaCCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGa < 2:4205829/93‑1 (MQ=255)
aaCCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCCGCGTGa < 2:5237743/93‑1 (MQ=255)
aCCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAg > 1:2827167/1‑93 (MQ=255)
aCCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAg < 1:3565707/93‑1 (MQ=255)
ccGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAgg > 1:3258831/1‑93 (MQ=255)
cGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGgc > 1:694770/1‑93 (MQ=255)
cGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGgc < 1:1582647/93‑1 (MQ=255)
cGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGgc < 1:3949871/93‑1 (MQ=255)
cTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCt < 1:3508016/93‑1 (MQ=255)
ttGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTg > 2:6256063/1‑93 (MQ=255)
ttGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTg > 2:5441137/1‑93 (MQ=255)
ttGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTg > 2:3268797/1‑93 (MQ=255)
ggTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGc > 1:5276245/1‑93 (MQ=255)
ggTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGc > 2:1210452/1‑93 (MQ=255)
tATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCAtt < 2:1863786/93‑1 (MQ=255)
tATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCAtt < 2:1844908/93‑1 (MQ=255)
tGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTgg > 2:84512/1‑93 (MQ=255)
gcgcGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGc < 1:1548713/93‑1 (MQ=255)
gcgcGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGc > 1:4696298/1‑93 (MQ=255)
aTGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCaa < 1:6294046/93‑1 (MQ=255)
aTGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCaa > 1:3770376/1‑93 (MQ=255)
aTGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCGCGCATTGGTCGTCaa > 1:2402475/1‑93 (MQ=255)
tGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAAt > 2:5200916/1‑93 (MQ=255)
cAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCa < 2:1151514/93‑1 (MQ=255)
cAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCa < 2:5941582/93‑1 (MQ=255)
cAACTGGCAGGCCCTGGAGTTTTTGGCCCCCCCACGAGGTCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCa > 2:238057/1‑93 (MQ=255)
aaCTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCat > 1:2016942/1‑93 (MQ=255)
aCTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCata < 1:4828229/93‑1 (MQ=255)
aCTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCata < 1:4904031/93‑1 (MQ=255)
cTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCatat < 2:4646331/93‑1 (MQ=255)
tGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATAtt < 2:6146569/93‑1 (MQ=255)
gCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGa > 1:5823889/1‑93 (MQ=255)
gCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGa < 1:3281489/93‑1 (MQ=255)
cAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGAt < 1:941992/93‑1 (MQ=255)
gTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATAcc < 2:4688888/93‑1 (MQ=255)
tCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCa > 1:4492920/1‑93 (MQ=255)
tCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCa < 2:5815575/93‑1 (MQ=255)
tCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCa > 2:2628924/1‑93 (MQ=255)
tCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCa < 2:680375/93‑1 (MQ=255)
cTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGc < 2:5313065/93‑1 (MQ=255)
cTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCAGTGGGCGTCAATCATATTGATACCAGc > 1:6304687/1‑93 (MQ=255)
tGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCATTCATATTGATACCAGCg > 2:6058526/1‑93 (MQ=255)
tGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCg > 2:5718016/1‑93 (MQ=255)
ggAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGa > 2:1503227/1‑93 (MQ=255)
ggAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGa > 2:1693068/1‑93 (MQ=255)
gAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGAc < 1:3351764/93‑1 (MQ=255)
gTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACtt < 1:3081316/93‑1 (MQ=255)
gTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACtt > 1:3815186/1‑93 (MQ=255)
tttGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTa < 2:2227021/93‑1 (MQ=255)
|
TGCGATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑CCCCCCACGAGATCGCCACGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTA > NC_000913/1472241‑1472420
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑CCCCCCACGAGATCGCCACGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGT > NC_000913/1472247‑1472432
|
GAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑CCCCCCC > SRR4302533.5374857/1‑94 (MQ=60)
AGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTTGAGTTTTTGG‑CCCCCCca > SRR4302533.6092550/1‑92 (MQ=60)
AGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑CCCCCCca > SRR4302533.2896197/1‑92 (MQ=60)
AGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑CCCCCCca < SRR4302533.6282437/94‑3 (MQ=60)
GCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑CCCCCCcac < SRR4302533.3312861/94‑4 (MQ=60)
CAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACG > SRR4302533.4867819/1‑94 (MQ=60)
AGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGA < SRR4302533.235962/94‑1 (MQ=60)
AGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGGTTTTGGCCCCCCCACGA > SRR4302533.2047184/1‑94 (MQ=60)
GCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAG > SRR4302533.1692499/1‑94 (MQ=60)
GCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAG < SRR4302533.819828/94‑1 (MQ=60)
GCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAG > SRR4302533.3543239/1‑94 (MQ=60)
CAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGA > SRR4302533.2703048/1‑94 (MQ=60)
CAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGA > SRR4302533.3819371/1‑94 (MQ=60)
AATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGAT > SRR4302533.1011782/1‑94 (MQ=60)
CATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCC > SRR4302533.1713543/1‑94 (MQ=60)
CATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCC < SRR4302533.2016762/94‑1 (MQ=60)
CATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCC > SRR4302533.5629415/1‑94 (MQ=60)
CATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCC < SRR4302533.3540002/94‑1 (MQ=60)
CATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCC < SRR4302533.2508751/94‑1 (MQ=60)
ATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCG > SRR4302533.2583923/1‑94 (MQ=60)
TTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGC < SRR4302533.2504846/94‑1 (MQ=60)
TTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGC < SRR4302533.4570688/94‑1 (MQ=60)
TACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGT < SRR4302533.2824873/94‑1 (MQ=60)
TCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGACGCGTCGC > SRR4302533.2737121/1‑94 (MQ=60)
CTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCT > SRR4302533.6093193/1‑94 (MQ=60)
CGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTAT < SRR4302533.2492041/94‑1 (MQ=60)
CGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTAT < SRR4302533.2769697/94‑1 (MQ=60)
CGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTAT > SRR4302533.5339934/1‑94 (MQ=60)
GTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAA > SRR4302533.5734008/1‑94 (MQ=60)
TACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAAC > SRR4302533.4548893/1‑94 (MQ=60)
ACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACC < SRR4302533.5145825/94‑1 (MQ=60)
ACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACC < SRR4302533.1388965/94‑1 (MQ=60)
CAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCG > SRR4302533.684401/1‑94 (MQ=60)
AAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGT < SRR4302533.6150427/94‑1 (MQ=60)
AAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGT < SRR4302533.3234998/94‑1 (MQ=60)
AAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTG > SRR4302533.4760744/1‑94 (MQ=60)
TCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTG < SRR4302533.3467793/94‑1 (MQ=60)
TCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTG < SRR4302533.3945070/94‑1 (MQ=60)
CGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCG < SRR4302533.867193/94‑1 (MQ=60)
CGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCG < SRR4302533.2505830/94‑1 (MQ=60)
GTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGT < SRR4302533.103383/94‑1 (MQ=60)
GTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGT < SRR4302533.4035621/94‑1 (MQ=60)
TAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGA > SRR4302533.652663/1‑94 (MQ=60)
AACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAG > SRR4302533.2844562/1‑94 (MQ=60)
ACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGG > SRR4302533.3278933/1‑94 (MQ=60)
ACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGG < SRR4302533.3587684/94‑1 (MQ=60)
CCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGC > SRR4302533.698877/1‑94 (MQ=60)
CGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCG < SRR4302533.1592182/94‑1 (MQ=60)
CGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCG < SRR4302533.3973955/94‑1 (MQ=60)
CTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTG < SRR4302533.3529648/94‑1 (MQ=60)
TTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGG < SRR4302533.2107591/94‑1 (MQ=60)
TGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGC > SRR4302533.5307878/1‑94 (MQ=60)
GGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGC > SRR4302533.4724764/1‑94 (MQ=60)
GCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCG < SRR4302533.1558046/94‑1 (MQ=60)
GATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAA > SRR4302533.3793492/1‑94 (MQ=60)
GATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCGCGCATTGGTCGTCAA > SRR4302533.2417313/1‑94 (MQ=60)
ATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAAT < SRR4302533.6331567/94‑1 (MQ=60)
TGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATC > SRR4302533.1228935/1‑94 (MQ=60)
GCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCA < SRR4302533.1921523/94‑1 (MQ=60)
CAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCAT > SRR4302533.2029369/1‑94 (MQ=60)
ACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATAT < SRR4302533.4857491/94‑1 (MQ=60)
ACTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATAT < SRR4302533.4933747/94‑1 (MQ=60)
CTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATT < SRR4302533.649767/94‑1 (MQ=60)
CTGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATT > SRR4302533.6338821/1‑94 (MQ=60)
TGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTG > SRR4302533.2405948/1‑94 (MQ=60)
TGGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTG < SRR4302533.6256577/94‑1 (MQ=60)
GGCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGA > SRR4302533.5859068/1‑94 (MQ=60)
GCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGAT > SRR4302533.3463045/1‑94 (MQ=60)
GCAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGAT < SRR4302533.3301748/94‑1 (MQ=60)
CAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATA < SRR4302533.947534/94‑1 (MQ=60)
CAGGTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATA < SRR4302533.4905706/94‑1 (MQ=60)
GTCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCA > SRR4302533.4520131/1‑94 (MQ=60)
TCCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAG < SRR4302533.4725411/94‑1 (MQ=60)
CCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGC < SRR4302533.2935637/94‑1 (MQ=60)
CCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGC < SRR4302533.3866031/94‑1 (MQ=60)
CCTGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCAGTGGGCGTCAATCATATTGATACCAGC > SRR4302533.6342402/1‑94 (MQ=60)
TGGAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGA > SRR4302533.4782340/1‑94 (MQ=60)
GAGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACT < SRR4302533.3372468/94‑1 (MQ=60)
AGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTT > SRR4302533.1449930/1‑94 (MQ=60)
AGTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTT > SRR4302533.3838516/1‑94 (MQ=60)
GTTTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTT < SRR4302533.3100220/94‑1 (MQ=60)
TTTTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTA < SRR4302533.3570893/94‑1 (MQ=60)
TTGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATG < SRR4302533.2060051/94‑1 (MQ=60)
TGGCCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGG < SRR4302533.5715173/94‑1 (MQ=60)
ggcCCCCCCACGAGATCGCCGCGTCGCTATACCCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGT < SRR4302533.4950865/91‑1 (MQ=60)
ggcCCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGT > SRR4302533.1284585/4‑94 (MQ=60)
GC‑CCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTC < SRR4302533.3938060/94‑1 (MQ=60)
GC‑CCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTC < SRR4302533.5174798/94‑1 (MQ=60)
C‑CCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCC < SRR4302533.4663349/94‑1 (MQ=60)
C‑CCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCC < SRR4302533.3627428/94‑1 (MQ=60)
CCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCG < SRR4302533.5686229/94‑1 (MQ=60)
CCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCG < SRR4302533.3557271/94‑1 (MQ=60)
CCCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCG > SRR4302533.3181623/1‑94 (MQ=60)
CCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGC > SRR4302533.5242758/1‑94 (MQ=60)
CCCCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGC > SRR4302533.1025090/1‑94 (MQ=60)
CCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCAC < SRR4302533.4265869/94‑1 (MQ=60)
CCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCAC > SRR4302533.5230227/1‑94 (MQ=60)
CCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCAC > SRR4302533.2764110/1‑94 (MQ=60)
CCCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCAC > SRR4302533.905232/1‑94 (MQ=60)
CCACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACG > SRR4302533.5114116/1‑94 (MQ=60)
CACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGT > SRR4302533.3684404/1‑94 (MQ=60)
CACGAGATCGCCGCGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTCGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGC > SRR4302533.6048801/1‑94 (MQ=60)
|
GAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGG‑CCCCCCACGAGATCGCCACGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGT > NC_000913/1472247‑1472432
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
