Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,479,250 |
T→C |
R106R (CGT→CGC) |
ynbD → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,479,250 | 0 | T | C | 100.0%
| 566.3
/ NA
| 176 | R106R (CGT→CGC) | ynbD | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (77/99); total (77/99) |
Only 100 of 185 total aligned reads displayed.
ACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGTCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTAT > NC_000913/1479160‑1479339
|
aCAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGccc > 2:3898058/1‑93 (MQ=255)
aCAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGccc > 2:4237402/1‑93 (MQ=255)
cgcCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGaa < 2:1451621/93‑1 (MQ=255)
gcCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAag < 1:5083885/93‑1 (MQ=255)
gcCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAag < 1:2564291/93‑1 (MQ=255)
ccGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagt > 1:2202950/1‑93 (MQ=255)
cGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtg > 2:4539611/1‑93 (MQ=255)
aCTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtgag < 2:4672864/93‑1 (MQ=255)
aCTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGATTAGTTTTATACGCCCTGAagtgag > 2:1637818/1‑93 (MQ=255)
gtgctCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtgagt < 1:3388832/89‑1 (MQ=255)
ttGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtgagtg < 1:4916103/93‑1 (MQ=255)
tGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTgg > 1:4289825/1‑93 (MQ=255)
tGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTgg < 2:80958/93‑1 (MQ=255)
ccACCGGCTTATTCTGGCAACGGTAATGTCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGt < 1:2396870/93‑1 (MQ=255)
ccACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCGGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGt < 2:3087088/93‑1 (MQ=255)
ccACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGt < 2:162244/93‑1 (MQ=255)
ccGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGAc > 2:5742159/1‑93 (MQ=255)
cGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACg > 1:5499779/1‑93 (MQ=255)
ggCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACgg > 1:5684588/1‑93 (MQ=255)
ggCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACgg < 1:6074440/93‑1 (MQ=255)
gtttttCCGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGa < 2:209265/89‑1 (MQ=255)
cTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACggta < 2:6033008/93‑3 (MQ=255)
cTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGa < 1:4235779/93‑1 (MQ=255)
ttATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGAt > 1:226684/1‑93 (MQ=255)
tATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATg > 1:812685/1‑93 (MQ=255)
tATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATg < 2:1260560/93‑1 (MQ=255)
tATTCTGGCAACGGTAACGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATg > 1:3316025/1‑93 (MQ=255)
aTTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATgg < 2:1532613/93‑1 (MQ=255)
ttCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGc > 2:4750703/1‑93 (MQ=255)
tGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTAt > 2:5238041/1‑93 (MQ=255)
tGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTAt < 1:387888/93‑1 (MQ=255)
gCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTAttt < 1:918944/93‑1 (MQ=255)
gCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTAttt < 1:2759993/93‑1 (MQ=255)
aaCGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTc < 2:2678515/93‑1 (MQ=255)
aCGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCg > 1:3905166/1‑93 (MQ=255)
ggTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCa > 1:1021198/1‑93 (MQ=255)
tAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCCAc > 1:1357268/1‑93 (MQ=255)
tAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAAc < 2:4163852/93‑1 (MQ=255)
aaTGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACt > 1:1147697/1‑93 (MQ=255)
aaTGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACt > 1:4502077/1‑93 (MQ=255)
aaTGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACt < 1:4802474/93‑1 (MQ=255)
aTGGCGTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACtt < 2:525896/93‑1 (MQ=255)
aTGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACtt < 1:4635341/93‑1 (MQ=255)
tGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTg < 1:3169920/93‑1 (MQ=255)
gcccTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGa < 1:1399755/91‑1 (MQ=255)
gCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGaa > 1:3805000/1‑93 (MQ=255)
gCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGaa < 1:4016837/93‑1 (MQ=255)
ctgctgCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACt < 2:3948878/93‑1 (MQ=255)
ctgctgCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACt > 1:3636363/1‑93 (MQ=255)
ctgctgCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACt > 1:2800943/1‑93 (MQ=255)
ctgctgCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACt > 2:3510596/1‑93 (MQ=255)
tgctgcGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTg > 2:3981282/1‑93 (MQ=255)
gctgcGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGt > 2:2451804/1‑93 (MQ=255)
ctgcGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGtt > 2:1749356/1‑93 (MQ=255)
gcGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTg < 1:2229746/93‑1 (MQ=255)
cGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGa > 1:4937752/1‑93 (MQ=255)
ggTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGAt > 1:5946096/1‑93 (MQ=255)
gTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATc > 2:5692770/1‑93 (MQ=255)
gTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATc > 2:2396855/1‑93 (MQ=255)
ttttttGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCt < 2:3371811/93‑1 (MQ=255)
ttttttGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCt > 1:3673274/1‑93 (MQ=255)
ttttttGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCt < 2:5219541/93‑1 (MQ=255)
tttttGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTg > 2:7339/1‑93 (MQ=255)
tttGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGTCTATTTTCGCAACTTGAACTGTTTGATCTGcc < 1:164830/93‑1 (MQ=255)
tctctATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTta < 2:5499727/92‑1 (MQ=255)
tctATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTtata < 2:2509577/93‑1 (MQ=255)
tctATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTtata < 1:2724124/93‑1 (MQ=255)
tctATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTtata < 1:987607/93‑1 (MQ=255)
ctATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATaa < 1:2072329/93‑1 (MQ=255)
tATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAAc < 1:5297516/93‑1 (MQ=255)
tATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAAc < 2:5310534/93‑1 (MQ=255)
aTCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAAcc > 2:1380086/1‑93 (MQ=255)
tCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCa < 1:59203/93‑1 (MQ=255)
ccGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAg < 2:6090831/93‑1 (MQ=255)
cGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGt < 1:5392992/93‑1 (MQ=255)
cGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGt < 2:788912/93‑1 (MQ=255)
gCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGtc > 1:953461/1‑93 (MQ=255)
gCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGtc > 2:5211674/1‑93 (MQ=255)
gCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGtc < 2:4937202/93‑1 (MQ=255)
gCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGtc < 1:6165253/93‑1 (MQ=255)
gCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCACtc > 2:3400479/1‑93 (MQ=255)
cTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGtct < 2:4736764/93‑1 (MQ=255)
cTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGtct < 2:3168531/93‑1 (MQ=255)
agtttagtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCtt > 2:4701297/1‑93 (MQ=255)
agtttagtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCtt < 2:4366837/93‑1 (MQ=255)
agtttagtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCtt < 1:4573378/93‑1 (MQ=255)
gtttagtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTc < 2:3071886/93‑1 (MQ=255)
gtttagtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTc < 2:1574701/93‑1 (MQ=255)
tttagtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCg > 2:5051096/1‑93 (MQ=255)
tttagtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTACTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCg > 2:2952188/1‑93 (MQ=255)
ttagtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGACTCCTTCGc < 1:4819610/93‑1 (MQ=255)
gtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGc < 1:288046/93‑1 (MQ=255)
tttATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCat < 1:3256502/93‑1 (MQ=255)
ttATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCata < 1:3612088/93‑1 (MQ=255)
tATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCatat < 2:3725153/93‑1 (MQ=255)
tATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCatat < 2:925503/93‑1 (MQ=255)
aTCCGCCGTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAGCCAGTCTCCTTCGCTGCAtatt < 2:2595894/93‑1 (MQ=255)
tCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCAtatta < 2:2202950/93‑1 (MQ=255)
tCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCAtatta < 2:471280/93‑1 (MQ=255)
ccGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCAtattat < 2:3941201/93‑1 (MQ=255)
|
ACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGTCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTAT > NC_000913/1479160‑1479339
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGTCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTATTCTC > NC_000913/1479157‑1479343
|
CGAACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGC < SRR4302533.126929/94‑1 (MQ=60)
AACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCC > SRR4302533.949739/1‑94 (MQ=60)
ACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCT < SRR4302533.5434829/94‑1 (MQ=60)
AGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGA > SRR4302533.855966/1‑94 (MQ=60)
GCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAA > SRR4302533.1466707/1‑94 (MQ=60)
GCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGT > SRR4302533.4431106/1‑94 (MQ=60)
GCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGT < SRR4302533.2580073/94‑1 (MQ=60)
GCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGT < SRR4302533.5114610/94‑1 (MQ=60)
GCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGT > SRR4302533.2216528/1‑94 (MQ=60)
gtgcTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTG < SRR4302533.3409758/90‑1 (MQ=60)
TTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGG > SRR4302533.4315622/1‑94 (MQ=60)
TTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGG < SRR4302533.4945881/94‑1 (MQ=60)
TGTCTACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGG < SRR4302533.3171482/94‑1 (MQ=60)
GTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTAAGTGGGG < SRR4302533.3924309/94‑1 (MQ=60)
CCACCGGCTTATTCTGGCAACGGTAATGTCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTG < SRR4302533.2411666/94‑1 (MQ=60)
CACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGA > SRR4302533.2790029/1‑94 (MQ=60)
CCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACG > SRR4302533.5532956/1‑94 (MQ=60)
CGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGG > SRR4302533.5718924/1‑94 (MQ=60)
GGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGG < SRR4302533.6111184/94‑1 (MQ=60)
CTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGAT < SRR4302533.4261368/94‑1 (MQ=60)
CTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGAT > SRR4302533.228096/1‑94 (MQ=60)
TTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATG > SRR4302533.3805595/1‑94 (MQ=60)
TTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATG > SRR4302533.817444/1‑94 (MQ=60)
TTATTCTGGCAACGGTAACGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATG > SRR4302533.3336500/1‑94 (MQ=60)
TGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATT < SRR4302533.390226/94‑1 (MQ=60)
GGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTT > SRR4302533.3364551/1‑94 (MQ=60)
GCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTT < SRR4302533.924343/94‑1 (MQ=60)
GCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTT < SRR4302533.2776909/94‑1 (MQ=60)
CAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTC > SRR4302533.6187108/1‑94 (MQ=60)
AACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCG < SRR4302533.2761943/94‑1 (MQ=60)
AACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCG > SRR4302533.3929016/1‑94 (MQ=60)
AACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCG < SRR4302533.227953/94‑1 (MQ=60)
ACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGC < SRR4302533.1265242/94‑1 (MQ=60)
CGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCNCCCTGAAGTGAGTGGGNTGACGGGATGGCTNTNTNCNCA > SRR4302533.1395785/1‑94 (MQ=60)
CGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCA > SRR4302533.1027199/1‑94 (MQ=60)
GTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCCAC > SRR4302533.1365425/1‑94 (MQ=60)
TAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACT > SRR4302533.4529350/1‑94 (MQ=60)
TAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACT > SRR4302533.1154547/1‑94 (MQ=60)
AATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTT < SRR4302533.4831562/94‑1 (MQ=60)
AATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTT < SRR4302533.1674123/94‑1 (MQ=60)
ATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTG < SRR4302533.4663427/94‑1 (MQ=60)
TGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGA < SRR4302533.3189431/94‑1 (MQ=60)
GGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAA > SRR4302533.3828284/1‑94 (MQ=60)
GCCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAA < SRR4302533.1408191/94‑1 (MQ=60)
GCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAAC < SRR4302533.4041295/94‑1 (MQ=60)
CCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACT > SRR4302533.3658724/1‑94 (MQ=60)
CCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACT > SRR4302533.2818172/1‑94 (MQ=60)
CTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTG > SRR4302533.2650377/1‑94 (MQ=60)
GCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTT < SRR4302533.4679145/94‑1 (MQ=60)
GCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTT < SRR4302533.5207707/94‑1 (MQ=60)
CTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTT < SRR4302533.5075504/94‑1 (MQ=60)
CTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTT > SRR4302533.3190089/1‑94 (MQ=60)
TGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTG < SRR4302533.6090841/94‑1 (MQ=60)
GCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGA > SRR4302533.4967645/1‑94 (MQ=60)
GCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGA < SRR4302533.2243508/94‑1 (MQ=60)
CGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGAT > SRR4302533.5982055/1‑94 (MQ=60)
GGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATC > SRR4302533.6212826/1‑94 (MQ=60)
GTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCT > SRR4302533.3695848/1‑94 (MQ=60)
TTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGTCTATTTTCGCAACTTGAACTGTTTGATCTGCCT < SRR4302533.165878/94‑1 (MQ=60)
TTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCT > SRR4302533.4574649/1‑94 (MQ=60)
TGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTA > SRR4302533.4645670/1‑94 (MQ=60)
TCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAA > SRR4302533.4899552/1‑94 (MQ=60)
TCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAA < SRR4302533.993386/94‑1 (MQ=60)
TCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAA < SRR4302533.2740840/94‑1 (MQ=60)
CTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATtaa > SRR4302533.5729340/1‑91 (MQ=60)
CTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAAC < SRR4302533.2085094/94‑1 (MQ=60)
TATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACC < SRR4302533.5329246/94‑1 (MQ=60)
ATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCA > SRR4302533.2285416/1‑94 (MQ=60)
TCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAG < SRR4302533.59592/94‑1 (MQ=60)
CCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGT < SRR4302533.341966/94‑1 (MQ=60)
CGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTC > SRR4302533.959062/1‑94 (MQ=60)
CGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTC < SRR4302533.5425392/94‑1 (MQ=60)
GCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCT > SRR4302533.3329052/1‑94 (MQ=60)
GCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCT < SRR4302533.6202314/94‑1 (MQ=60)
TGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCC > SRR4302533.2136751/1‑94 (MQ=60)
GAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGTGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCT < SRR4302533.3898416/94‑1 (MQ=60)
GAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCT < SRR4302533.4179663/94‑1 (MQ=60)
AAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTT < SRR4302533.5566488/94‑1 (MQ=60)
AGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTC < SRR4302533.4601095/94‑1 (MQ=60)
GTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCG > SRR4302533.2438419/1‑94 (MQ=60)
GTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCG < SRR4302533.3651917/94‑1 (MQ=60)
TTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGC > SRR4302533.1389308/1‑94 (MQ=60)
TTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGACTCCTTCGCT < SRR4302533.4848817/94‑1 (MQ=60)
GTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCA < SRR4302533.289805/94‑1 (MQ=60)
TTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATA < SRR4302533.3276583/94‑1 (MQ=60)
TTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATAT < SRR4302533.3634319/94‑1 (MQ=60)
ATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTA > SRR4302533.4010544/1‑94 (MQ=60)
ATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTA > SRR4302533.4845631/1‑94 (MQ=60)
TCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTAT > SRR4302533.5349276/1‑94 (MQ=60)
CGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTATTC < SRR4302533.6013075/94‑1 (MQ=60)
CGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTATTC < SRR4302533.3404195/94‑1 (MQ=60)
CGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTATTC > SRR4302533.4446980/1‑94 (MQ=60)
GCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTATTCT < SRR4302533.1854483/94‑1 (MQ=60)
CCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTATTCTC > SRR4302533.5627522/1‑94 (MQ=60)
CCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTATTCTC > SRR4302533.1218501/1‑94 (MQ=60)
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CGAACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGTCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTATTCTC > NC_000913/1479157‑1479343
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
