Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,481,285 |
A→G |
A67A (GCA→GCG) |
hrpA → |
helicase, ATP‑dependent |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,481,285 | 0 | A | G | 100.0%
| 640.2
/ NA
| 199 | A67A (GCA→GCG) | hrpA | helicase, ATP‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (72/127); total (72/127) |
Only 100 of 208 total aligned reads displayed.
TAAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTG > NC_000913/1481195‑1481372
|
aaaaaTCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGa < 2:5280995/93‑1 (MQ=255)
aaaTCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGAcc < 2:1136278/93‑1 (MQ=255)
tCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAACGTCCTGCTGGGTGAACCGGCGCGACCGGa > 1:4723780/1‑93 (MQ=255)
tCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGa < 1:3870482/93‑1 (MQ=255)
tCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGa > 2:1217978/1‑93 (MQ=255)
ccTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGaa < 2:5925664/93‑1 (MQ=255)
ccTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGaa < 2:3367371/93‑1 (MQ=255)
ccTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGaa > 2:4258659/1‑93 (MQ=255)
cTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGaaa < 1:4101852/93‑1 (MQ=255)
cTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGaaa < 1:3740444/93‑1 (MQ=255)
cTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGaaa > 1:1761220/1‑93 (MQ=255)
cTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGaaa < 2:4151425/93‑1 (MQ=255)
tGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAAt < 1:900884/93‑1 (MQ=255)
gATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAAtt > 1:1272609/1‑93 (MQ=255)
gATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAAtt > 1:4389571/1‑93 (MQ=255)
aTGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTa > 2:4756681/1‑93 (MQ=255)
tGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTAc > 1:1019781/1‑93 (MQ=255)
gCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACt > 2:4410146/1‑93 (MQ=255)
gCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACt > 2:230429/1‑93 (MQ=255)
cacaACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACtt < 2:3528250/93‑1 (MQ=255)
cacaACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACtt < 2:264981/93‑1 (MQ=255)
acaacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTa > 2:3827714/1‑93 (MQ=255)
acaacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTa < 1:5429720/93‑1 (MQ=255)
acaacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTa < 1:3446912/93‑1 (MQ=255)
aacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATc < 2:2552129/93‑1 (MQ=255)
aacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATc < 2:3223098/93‑1 (MQ=255)
aacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATc > 2:6082468/1‑93 (MQ=255)
acaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGGAATTACTTATcc > 1:2371632/1‑93 (MQ=255)
acaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATcc < 2:1707529/93‑1 (MQ=255)
caGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCt < 1:4343772/93‑1 (MQ=255)
caGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCt > 1:2934273/1‑93 (MQ=255)
aGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTg > 1:480751/1‑93 (MQ=255)
ggCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGa < 1:2800985/93‑1 (MQ=255)
ggCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGa > 2:1588080/1‑93 (MQ=255)
ggCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGa < 2:1471947/93‑1 (MQ=255)
gCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGAc > 1:3386238/1‑93 (MQ=255)
gCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGAc < 1:4842591/93‑1 (MQ=255)
gCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGAc > 2:4853218/1‑93 (MQ=255)
ccATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACa < 2:2227239/93‑1 (MQ=255)
cATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACaa < 2:5000356/93‑1 (MQ=255)
cATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACaa > 1:2671230/1‑93 (MQ=255)
aTTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAAt > 2:5590741/1‑93 (MQ=255)
aTTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAAt < 1:999233/93‑1 (MQ=255)
tCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCAGATGCGTGAAGCGGAGCGACCGGAAATTACTTATCCTGACAATTTAc > 2:5523525/1‑93 (MQ=255)
ccAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTAcc < 1:4570956/93‑1 (MQ=255)
ccAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTAcc > 2:2027972/1‑93 (MQ=255)
ggAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGt > 2:3998523/1‑93 (MQ=255)
gagaTGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGtt < 2:5790292/93‑1 (MQ=255)
gaTGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAg < 2:565597/93‑1 (MQ=255)
gaTGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAg > 1:6058759/1‑93 (MQ=255)
aTGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGt > 1:5754062/1‑93 (MQ=255)
ggCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCa < 2:1876010/93‑1 (MQ=255)
ggCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCa > 2:4543521/1‑93 (MQ=255)
cGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGa < 1:1602094/93‑1 (MQ=255)
aaaGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGaaa > 1:5055437/1‑93 (MQ=255)
aaGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGaaaa > 1:4928064/1‑93 (MQ=255)
aaGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGaaaa < 1:4021125/93‑1 (MQ=255)
aaGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGaaaa > 2:5311022/1‑93 (MQ=255)
aaGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGaaaa < 1:1666581/93‑1 (MQ=255)
agagATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGaaaaa < 1:5353606/93‑1 (MQ=255)
gaTTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACa < 2:3724952/93‑1 (MQ=255)
aTTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAg > 2:857182/1‑93 (MQ=255)
aTTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAg < 1:2066797/93‑1 (MQ=255)
ttGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAgg < 2:1796532/93‑1 (MQ=255)
tGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGa < 2:2212171/93‑1 (MQ=255)
tGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGa < 1:2279897/93‑1 (MQ=255)
gACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGAc < 1:5231488/93‑1 (MQ=255)
aCCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTGAGTCAGAAAATACAGGACa < 2:6136627/93‑1 (MQ=255)
cAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACAtt > 2:4346271/1‑93 (MQ=255)
aGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATtc < 1:3100459/93‑1 (MQ=255)
aGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATtc < 1:3318766/93‑1 (MQ=255)
gcggcAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATtctc < 2:5077045/93‑1 (MQ=255)
gcggcAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATtctc > 2:534223/1‑93 (MQ=255)
gcggcAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATtctc < 1:2099687/93‑1 (MQ=255)
gcggcAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATtctc > 2:5739445/1‑93 (MQ=255)
ggcAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGa < 2:1981458/93‑1 (MQ=255)
gcAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGaa < 1:6253662/93‑1 (MQ=255)
gcAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGaa < 2:1296416/93‑1 (MQ=255)
aGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGc < 1:5947631/93‑1 (MQ=255)
ggAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGa > 2:510082/1‑93 (MQ=255)
ggAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGa > 2:2465222/1‑93 (MQ=255)
ggAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGa > 2:5421681/1‑93 (MQ=255)
ggAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGa < 1:2902215/93‑1 (MQ=255)
gAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGAt < 1:421862/93‑1 (MQ=255)
aaGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTc < 1:1236613/93‑1 (MQ=255)
aaGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTc > 1:3923701/1‑93 (MQ=255)
aaGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTc < 2:3588052/93‑1 (MQ=255)
aGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCg < 2:5156514/93‑1 (MQ=255)
ccTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGa < 1:5578447/93‑1 (MQ=255)
ctgctgCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGGAGCGATTCGTGAt > 2:2945654/1‑93 (MQ=255)
ctgctgCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGAt > 1:3184439/1‑93 (MQ=255)
tgctgcGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATc > 1:1316301/1‑93 (MQ=255)
gctgcGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCa > 2:4979986/1‑93 (MQ=255)
ctgcGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCAc > 1:714231/1‑93 (MQ=255)
tgcGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCAcc > 2:4692865/1‑93 (MQ=255)
gcGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCa > 1:1984519/1‑93 (MQ=255)
cGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAg < 1:958266/93‑1 (MQ=255)
cGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAg < 2:2147772/93‑1 (MQ=255)
tGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAggt < 2:2438168/93‑1 (MQ=255)
aaGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAggtgg < 2:451292/93‑1 (MQ=255)
|
TAAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTG > NC_000913/1481195‑1481372
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTTAAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTC > NC_000913/1481192‑1481378
|
GGTTAAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCG < SRR4302533.1055027/94‑1 (MQ=60)
GGTTAAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCG > SRR4302533.2161001/1‑94 (MQ=60)
GGTTAAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCG < SRR4302533.1997858/94‑1 (MQ=60)
GTTAAAAATCCTGATGCACAACATGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCTGCAGGGGAAGTCCTGCTGCGTGAAGCGGCGC > SRR4302533.2803486/1‑94 (MQ=60)
TTAAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCG > SRR4302533.438646/1‑94 (MQ=60)
AAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGAC < SRR4302533.924788/94‑1 (MQ=60)
AAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACC > SRR4302533.1490975/1‑94 (MQ=60)
AAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACC < SRR4302533.2095325/94‑1 (MQ=60)
AAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGAGACC < SRR4302533.998902/94‑1 (MQ=60)
AAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCG > SRR4302533.2931669/1‑94 (MQ=60)
ATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAACGTCCTGCTGGGTGAACCGGCGCGACCGGA > SRR4302533.4752423/1‑94 (MQ=60)
TCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAA < SRR4302533.3894109/94‑1 (MQ=60)
CCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAA > SRR4302533.1771952/1‑94 (MQ=60)
CTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAAT < SRR4302533.4126812/94‑1 (MQ=60)
CTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAAT < SRR4302533.3763384/94‑1 (MQ=60)
TGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATT < SRR4302533.906166/94‑1 (MQ=60)
TGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATT > SRR4302533.4416074/1‑94 (MQ=60)
TGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATT > SRR4302533.1280225/1‑94 (MQ=60)
ATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTAC > SRR4302533.1025774/1‑94 (MQ=60)
ATGCACAACAGCCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGCGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTAC > SRR4302533.5866204/1‑94 (MQ=60)
GCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTT > SRR4302533.6223521/1‑94 (MQ=60)
GCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTT < SRR4302533.5990452/94‑1 (MQ=60)
GCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTT < SRR4302533.3365792/94‑1 (MQ=60)
CACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTA < SRR4302533.1766571/94‑1 (MQ=60)
ACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTAT < SRR4302533.5462421/94‑1 (MQ=60)
ACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTAT < SRR4302533.5576776/94‑1 (MQ=60)
ACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTAT < SRR4302533.890881/94‑1 (MQ=60)
ACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTAT < SRR4302533.1658782/94‑1 (MQ=60)
ACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTAT < SRR4302533.3468196/94‑1 (MQ=60)
CAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATC > SRR4302533.2816243/1‑94 (MQ=60)
CAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATC > SRR4302533.2816244/1‑94 (MQ=60)
AACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGGAATTACTTATCC > SRR4302533.2386306/1‑94 (MQ=60)
ACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCT > SRR4302533.2952214/1‑94 (MQ=60)
CAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTG < SRR4302533.4369949/94‑1 (MQ=60)
CAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTG > SRR4302533.483626/1‑94 (MQ=60)
AGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGA < SRR4302533.5115704/94‑1 (MQ=60)
GGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGAC < SRR4302533.5327739/94‑1 (MQ=60)
GGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGAC > SRR4302533.3407146/1‑94 (MQ=60)
GGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGAC < SRR4302533.2818214/94‑1 (MQ=60)
GGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGAC > SRR4302533.4861025/1‑94 (MQ=60)
GGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGAC < SRR4302533.2648135/94‑1 (MQ=60)
GCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACA < SRR4302533.4871941/94‑1 (MQ=60)
GCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACA < SRR4302533.5585521/94‑1 (MQ=60)
CCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAA > SRR4302533.2687613/1‑94 (MQ=60)
CATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAAT < SRR4302533.2031645/94‑1 (MQ=60)
ATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATT < SRR4302533.1005065/94‑1 (MQ=60)
CCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCG < SRR4302533.4598659/94‑1 (MQ=60)
AGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGT > SRR4302533.5007139/1‑94 (MQ=60)
AGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAG > SRR4302533.6095439/1‑94 (MQ=60)
AGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAG < SRR4302533.1861267/94‑1 (MQ=60)
GATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGT > SRR4302533.5788778/1‑94 (MQ=60)
CGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAA < SRR4302533.1611797/94‑1 (MQ=60)
GAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAA > SRR4302533.5085997/1‑94 (MQ=60)
AAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAA > SRR4302533.4957907/1‑94 (MQ=60)
AAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAA < SRR4302533.1676652/94‑1 (MQ=60)
AAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAA < SRR4302533.4045611/94‑1 (MQ=60)
AGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAA < SRR4302533.5385737/94‑1 (MQ=60)
GAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAAC < SRR4302533.4093371/94‑1 (MQ=60)
AGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACA > SRR4302533.4502954/1‑94 (MQ=60)
GATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAG > SRR4302533.1253840/1‑94 (MQ=60)
ATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGG < SRR4302533.3182974/94‑1 (MQ=60)
ATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGG < SRR4302533.4216950/94‑1 (MQ=60)
ATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGG < SRR4302533.2079532/94‑1 (MQ=60)
ATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGG < SRR4302533.3266954/94‑1 (MQ=60)
TGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGAC < SRR4302533.2294015/94‑1 (MQ=60)
GACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACA < SRR4302533.5262954/94‑1 (MQ=60)
GACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACA < SRR4302533.981585/94‑1 (MQ=60)
CCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATT < SRR4302533.3848250/94‑1 (MQ=60)
AGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCT < SRR4302533.4609677/94‑1 (MQ=60)
AGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCT < SRR4302533.4777993/94‑1 (MQ=60)
AGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCT < SRR4302533.3912022/94‑1 (MQ=60)
AGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCT < SRR4302533.3339266/94‑1 (MQ=60)
AGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCT < SRR4302533.3415824/94‑1 (MQ=60)
AGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCT < SRR4302533.3119519/94‑1 (MQ=60)
GCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCG < SRR4302533.2112639/94‑1 (MQ=60)
GCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAG < SRR4302533.6291066/94‑1 (MQ=60)
CAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGC > SRR4302533.2907661/1‑94 (MQ=60)
AGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCG < SRR4302533.4072829/94‑1 (MQ=60)
AGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCG < SRR4302533.5983604/94‑1 (MQ=60)
GGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGAT < SRR4302533.2920043/94‑1 (MQ=60)
GAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATT < SRR4302533.424386/94‑1 (MQ=60)
AAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTC < SRR4302533.5704764/94‑1 (MQ=60)
AAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTC < SRR4302533.4284669/94‑1 (MQ=60)
AAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTC > SRR4302533.3947657/1‑94 (MQ=60)
AGGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCG < SRR4302533.3749639/94‑1 (MQ=60)
AAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCG < SRR4302533.1244003/94‑1 (MQ=60)
AGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGT < SRR4302533.4023923/94‑1 (MQ=60)
GTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTG < SRR4302533.2258329/94‑1 (MQ=60)
CCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGAT < SRR4302533.5612161/94‑1 (MQ=60)
CCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGAT > SRR4302533.3204026/1‑94 (MQ=60)
CCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGAT < SRR4302533.1290646/94‑1 (MQ=60)
CTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATC < SRR4302533.2337455/94‑1 (MQ=60)
CTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATC > SRR4302533.1324196/1‑94 (MQ=60)
CTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATC < SRR4302533.2988590/94‑1 (MQ=60)
CTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATC < SRR4302533.1052619/94‑1 (MQ=60)
TGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCA > SRR4302533.4925177/1‑94 (MQ=60)
GCTGCGTGAAGCGTCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGAATCGTGATCAC < SRR4302533.715450/94‑1 (MQ=60)
GCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCAC > SRR4302533.718447/1‑94 (MQ=60)
TGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCA > SRR4302533.1996660/1‑94 (MQ=60)
CGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGG < SRR4302533.963901/94‑1 (MQ=60)
GCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGA < SRR4302533.5461277/94‑1 (MQ=60)
CGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGT > SRR4302533.4421599/1‑94 (MQ=60)
GCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTC > SRR4302533.2510768/1‑94 (MQ=60)
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GGTTAAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTC > NC_000913/1481192‑1481378
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
