Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,482,154 |
T→C |
V357A (GTA→GCA) |
hrpA → |
helicase, ATP‑dependent |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,482,154 | 0 | T | C | 100.0%
| 634.6
/ NA
| 202 | V357A (GTA→GCA) | hrpA | helicase, ATP‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (80/122); total (80/122) |
Only 100 of 207 total aligned reads displayed.
TTCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGTACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAG > NC_000913/1482065‑1482242
|
ttCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCAcc < 2:5793951/93‑1 (MQ=255)
tCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCg < 2:5996071/93‑1 (MQ=255)
cGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCgg < 2:2124483/93‑1 (MQ=255)
cGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCgg > 2:4807054/1‑93 (MQ=255)
gAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCggg > 2:1689537/1‑93 (MQ=255)
gAACAGCGAACAAAATAGGGCATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGACACGTCGCCGACCGCACCggg > 1:3463431/1‑93 (MQ=255)
aaCAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCgggg > 1:2256189/1‑93 (MQ=255)
aaCAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCgggg < 1:145823/93‑1 (MQ=255)
aGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGAtt < 2:2594672/93‑1 (MQ=255)
aGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGAtt < 1:3828442/93‑1 (MQ=255)
gCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTa < 2:2631643/93‑1 (MQ=255)
gAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGGTTaaa > 1:3065872/1‑93 (MQ=255)
gAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTaaa > 2:3640758/1‑93 (MQ=255)
gAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTaaa > 2:683225/1‑93 (MQ=255)
gAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTaaa > 1:6004042/1‑93 (MQ=255)
gAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTaaa < 1:4449916/93‑1 (MQ=255)
gAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTaaa > 2:894081/1‑93 (MQ=255)
aaCAAAATAGGGTATCCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAAt < 1:1298455/93‑1 (MQ=255)
cAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATAc < 2:159279/93‑1 (MQ=255)
aaaaTAGGGTATTCCAGTCGCGCAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACg < 2:1002295/93‑1 (MQ=255)
aaaaTAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACg > 2:5876665/1‑93 (MQ=255)
aaaTAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGt < 1:3520947/93‑1 (MQ=255)
aaaTAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGt < 1:3419278/93‑1 (MQ=255)
tAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTAt < 1:1989036/93‑1 (MQ=255)
tAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTAt < 2:768099/93‑1 (MQ=255)
tAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACAGCACCGGGGATTAAATACGCTAt > 1:1103960/1‑93 (MQ=255)
aGGGTGTTCCAGCCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGAATTAAATACGTTATc < 2:800719/93‑1 (MQ=255)
aGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATc < 2:2493615/93‑1 (MQ=255)
gggTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCg > 1:18017/1‑93 (MQ=255)
gTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAc < 1:2691534/93‑1 (MQ=255)
gTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAc > 1:4650798/1‑93 (MQ=255)
aTTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAccc > 1:2391546/1‑93 (MQ=255)
aTTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAccc > 1:320595/1‑93 (MQ=255)
ttCCAGTCGCACGGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAcccc < 1:5511511/93‑1 (MQ=255)
ttCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAcccc > 1:4581822/1‑93 (MQ=255)
tCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCg < 2:4947181/93‑1 (MQ=255)
ccAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCgg < 2:3012796/93‑1 (MQ=255)
ccAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCgg < 1:2371903/93‑1 (MQ=255)
cAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGt > 1:3339761/1‑93 (MQ=255)
gTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTAc > 2:2648840/1‑93 (MQ=255)
gTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTAc > 2:3093886/1‑93 (MQ=255)
cGCACAGCGGACGGCGCATTGTGCTGGCGAACAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAg < 1:1233517/93‑1 (MQ=255)
gCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAgc < 2:5692127/93‑1 (MQ=255)
cacaGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAgcg > 2:396698/1‑93 (MQ=255)
acaGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAgcgc < 2:3103998/93‑1 (MQ=255)
acaGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAgcgc < 2:2727807/93‑1 (MQ=255)
acaGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAgcgc > 1:4269783/1‑93 (MQ=255)
aGCGGACGGCGCATTGTGCTGGCGACCAGCGTCTCGGAAACGTCGCTGACCGCACCGGGGATTAAACACGTTATCGACCCCGGTTCAGCGCGt < 2:3224006/93‑1 (MQ=255)
aGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGt < 1:5775041/93‑1 (MQ=255)
gCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTa > 1:8273/1‑93 (MQ=255)
gCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTa < 2:5387225/93‑1 (MQ=255)
gACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCa < 1:2842283/93‑1 (MQ=255)
gACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCa < 2:5481650/93‑1 (MQ=255)
gACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCa > 1:4809913/1‑93 (MQ=255)
aCGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAg > 2:5296487/1‑93 (MQ=255)
cGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGc > 2:3352807/1‑93 (MQ=255)
cGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGc < 1:1676271/93‑1 (MQ=255)
ggCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGcc > 2:269512/1‑93 (MQ=255)
gcgcATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCg > 2:4062086/1‑93 (MQ=255)
gcATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCt < 2:2244075/93‑1 (MQ=255)
aTTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTAc < 2:4878504/93‑1 (MQ=255)
ttGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACa > 1:2184540/1‑93 (MQ=255)
ttGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACa < 1:3931532/93‑1 (MQ=255)
ttGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACa > 2:5104113/1‑93 (MQ=255)
ttGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACa < 2:375239/93‑1 (MQ=255)
gtgCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGc < 2:1067356/93‑1 (MQ=255)
cTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTAt > 1:1193151/1‑93 (MQ=255)
tGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATc > 1:3581942/1‑93 (MQ=255)
tGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATc > 2:1411894/1‑93 (MQ=255)
ggCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCg > 1:692387/1‑93 (MQ=255)
cGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCa < 1:4900734/93‑1 (MQ=255)
gACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACACCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCAc > 2:1787072/1‑93 (MQ=255)
aCCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCACAcc > 2:3816800/1‑93 (MQ=255)
ccAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCa > 2:2306212/1‑93 (MQ=255)
cAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCaa > 1:2359081/1‑93 (MQ=255)
cAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCaa > 1:5337903/1‑93 (MQ=255)
cGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGt < 2:626471/93‑1 (MQ=255)
cGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGt < 2:3046671/93‑1 (MQ=255)
gTCGCGGAAATGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTg > 1:4495456/1‑93 (MQ=255)
tCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGc < 2:6069444/93‑1 (MQ=255)
tCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGc < 1:5052014/93‑1 (MQ=255)
cgcgGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGcc > 1:868829/1‑92 (MQ=255)
cgcgGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCa < 2:1527442/93‑1 (MQ=255)
cgcgGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCa > 1:398775/1‑93 (MQ=255)
gcgGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAg < 2:1605104/93‑1 (MQ=255)
gcgGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAg < 2:1323971/93‑1 (MQ=255)
gcgGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAg < 1:504341/93‑1 (MQ=255)
ggAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCg < 1:5100218/93‑1 (MQ=255)
gAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGt > 1:2891172/1‑93 (MQ=255)
gAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGt < 2:4296177/93‑1 (MQ=255)
aaaCGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGtt < 1:4164177/93‑1 (MQ=255)
aaCGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGttt < 1:753306/93‑1 (MQ=255)
aaCGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGttt < 1:3773058/93‑1 (MQ=255)
aCGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTg > 2:5542432/1‑93 (MQ=255)
gTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGcc < 2:4411463/93‑1 (MQ=255)
tCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCg > 2:5026569/1‑93 (MQ=255)
gCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGAt > 1:6031952/1‑93 (MQ=255)
tGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTg > 1:1571154/1‑93 (MQ=255)
tGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTg > 1:3654793/1‑93 (MQ=255)
aCCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAg > 1:5530176/1‑93 (MQ=255)
|
TTCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGTACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAG > NC_000913/1482065‑1482242
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTTTCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGTACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAGCCGAT > NC_000913/1482062‑1482247
|
GCTTTCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCA < SRR4302533.3262106/94‑1 (MQ=60)
TTTCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACC > SRR4302533.5058497/1‑94 (MQ=60)
CTTCGAACAGCGAACAAAATATGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACC < SRR4302533.5723773/94‑1 (MQ=60)
TTCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCG < SRR4302533.5644811/94‑1 (MQ=60)
TTCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCG < SRR4302533.2380054/94‑1 (MQ=60)
CGAACAGCGAACAAAATAGGGCATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGACACGTCGCCGACCGCACCGGG > SRR4302533.3484811/1‑94 (MQ=60)
GAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGG < SRR4302533.2779756/94‑1 (MQ=60)
GAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGG > SRR4302533.2270147/1‑94 (MQ=60)
GAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGG < SRR4302533.6057339/94‑1 (MQ=60)
AACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGA > SRR4302533.5382171/1‑94 (MQ=60)
AACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGA < SRR4302533.146753/94‑1 (MQ=60)
CAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATT < SRR4302533.5124861/94‑1 (MQ=60)
AGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTA < SRR4302533.3851851/94‑1 (MQ=60)
CGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGGTTAAA > SRR4302533.3084702/1‑94 (MQ=60)
CGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAA < SRR4302533.2250131/94‑1 (MQ=60)
CGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAA > SRR4302533.6040420/1‑94 (MQ=60)
CGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAA < SRR4302533.1699772/94‑1 (MQ=60)
GAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAAT < SRR4302533.687705/94‑1 (MQ=60)
GAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAAT < SRR4302533.4476825/94‑1 (MQ=60)
AACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATA < SRR4302533.4418599/94‑1 (MQ=60)
AACAAAATAGGGTATCCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATA < SRR4302533.1306269/94‑1 (MQ=60)
CAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACG < SRR4302533.3735245/94‑1 (MQ=60)
AAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGT < SRR4302533.3856287/94‑1 (MQ=60)
AAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGT < SRR4302533.5700105/94‑1 (MQ=60)
AAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTT < SRR4302533.3440405/94‑1 (MQ=60)
AAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTT < SRR4302533.3542652/94‑1 (MQ=60)
AATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTA > SRR4302533.2956997/1‑94 (MQ=60)
AATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTA < SRR4302533.3378483/94‑1 (MQ=60)
ATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTAT < SRR4302533.4844570/94‑1 (MQ=60)
ATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACAGCACCGGGGATTAAATACGCTAT > SRR4302533.1110499/1‑94 (MQ=60)
TAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATC > SRR4302533.3839086/1‑94 (MQ=60)
TAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATC < SRR4302533.4050275/94‑1 (MQ=60)
TAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATC < SRR4302533.2001206/94‑1 (MQ=60)
AGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCG < SRR4302533.4517330/94‑1 (MQ=60)
AGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCG < SRR4302533.4095274/94‑1 (MQ=60)
AGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCG > SRR4302533.18139/1‑94 (MQ=60)
GGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAC > SRR4302533.4678977/1‑94 (MQ=60)
GTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACC < SRR4302533.2708031/94‑1 (MQ=60)
GTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACC < SRR4302533.2869818/94‑1 (MQ=60)
TATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCC > SRR4302533.2406311/1‑94 (MQ=60)
TATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCC > SRR4302533.322555/1‑94 (MQ=60)
TATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCC < SRR4302533.1666929/94‑1 (MQ=60)
ATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCC > SRR4302533.4609583/1‑94 (MQ=60)
TTCCAGTCGCACGGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCG < SRR4302533.5544786/94‑1 (MQ=60)
TTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCG < SRR4302533.5544787/94‑1 (MQ=60)
TCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGG > SRR4302533.50833/1‑94 (MQ=60)
CCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGT > SRR4302533.3360402/1‑94 (MQ=60)
CCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGT > SRR4302533.2761670/1‑94 (MQ=60)
CCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGT < SRR4302533.2386579/94‑1 (MQ=60)
AGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTAC > SRR4302533.1184156/1‑94 (MQ=60)
TCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAG > SRR4302533.4235478/1‑94 (MQ=60)
CGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGC < SRR4302533.3540727/94‑1 (MQ=60)
CGCACAGCGGACGGCGCATTGTGCTGGCGAACAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGC < SRR4302533.1240897/94‑1 (MQ=60)
GCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCG < SRR4302533.3648331/94‑1 (MQ=60)
CACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGC > SRR4302533.4295486/1‑94 (MQ=60)
ACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCG > SRR4302533.1244804/1‑94 (MQ=60)
AGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTA < SRR4302533.5809917/94‑1 (MQ=60)
AGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTA > SRR4302533.8346/1‑94 (MQ=60)
GCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTAT < SRR4302533.1474781/94‑1 (MQ=60)
GGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCA > SRR4302533.4839066/1‑94 (MQ=60)
GGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCA > SRR4302533.531648/1‑94 (MQ=60)
GACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAG < SRR4302533.71891/94‑1 (MQ=60)
GACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAG < SRR4302533.2859778/94‑1 (MQ=60)
GACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAG > SRR4302533.1210557/1‑94 (MQ=60)
CGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCC < SRR4302533.1686421/94‑1 (MQ=60)
CGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCC < SRR4302533.2281603/94‑1 (MQ=60)
CGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCC < SRR4302533.452820/94‑1 (MQ=60)
GGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCG < SRR4302533.3451546/94‑1 (MQ=60)
GCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTA > SRR4302533.2169979/1‑94 (MQ=60)
ATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACA > SRR4302533.2198006/1‑94 (MQ=60)
TTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAG > SRR4302533.880638/1‑94 (MQ=60)
TTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAG < SRR4302533.3955535/94‑1 (MQ=60)
GCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTAT > SRR4302533.1415734/1‑94 (MQ=60)
GCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTAT > SRR4302533.1200320/1‑94 (MQ=60)
CTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATC > SRR4302533.3604006/1‑94 (MQ=60)
TGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCG > SRR4302533.696476/1‑94 (MQ=60)
TGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCG < SRR4302533.3571548/94‑1 (MQ=60)
GGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACTTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGC < SRR4302533.1915883/94‑1 (MQ=60)
GGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGC > SRR4302533.5916568/1‑94 (MQ=60)
CGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCAC < SRR4302533.4930427/94‑1 (MQ=60)
CCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAA > SRR4302533.2373661/1‑94 (MQ=60)
CCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAA > SRR4302533.5369907/1‑94 (MQ=60)
CGTCGCGGAAATGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTG > SRR4302533.4522678/1‑94 (MQ=60)
CGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTG < SRR4302533.3194255/94‑1 (MQ=60)
GTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGC < SRR4302533.761585/94‑1 (MQ=60)
GTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGC > SRR4302533.3275479/1‑94 (MQ=60)
TCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCC > SRR4302533.873928/1‑94 (MQ=60)
TCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCA < SRR4302533.5082561/94‑1 (MQ=60)
TCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCA > SRR4302533.401184/1‑94 (MQ=60)
GCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGC < SRR4302533.2404783/94‑1 (MQ=60)
GCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGC < SRR4302533.507334/94‑1 (MQ=60)
GGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGT < SRR4302533.5131028/94‑1 (MQ=60)
GGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGT > SRR4302533.2908941/1‑94 (MQ=60)
AAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTT < SRR4302533.4189406/94‑1 (MQ=60)
AACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTG < SRR4302533.3796187/94‑1 (MQ=60)
AACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTG < SRR4302533.757743/94‑1 (MQ=60)
GTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCG < SRR4302533.2484750/94‑1 (MQ=60)
CGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGAT < SRR4302533.3973407/94‑1 (MQ=60)
CGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGAT > SRR4302533.6068509/1‑94 (MQ=60)
CGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGAT < SRR4302533.865208/94‑1 (MQ=60)
GCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATT > SRR4302533.4680056/1‑94 (MQ=60)
CTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTG > SRR4302533.3677260/1‑94 (MQ=60)
CTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTG > SRR4302533.1580619/1‑94 (MQ=60)
TGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGA > SRR4302533.4620433/1‑94 (MQ=60)
GACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAG > SRR4302533.5563559/1‑94 (MQ=60)
CGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAGCCG < SRR4302533.1810787/94‑1 (MQ=60)
CGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAGCCG < SRR4302533.2674121/94‑1 (MQ=60)
CACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAGCCGAT < SRR4302533.76089/94‑1 (MQ=60)
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GCTTTCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGTACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAGCCGAT > NC_000913/1482062‑1482247
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
