Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,483,908 |
A→G |
S942G (AGC→GGC) |
hrpA → |
helicase, ATP‑dependent |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,483,908 | 0 | A | G | 100.0%
| 625.6
/ NA
| 196 | S942G (AGC→GGC) | hrpA | helicase, ATP‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (102/94); total (102/94) |
Only 100 of 203 total aligned reads displayed.
AACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACAGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATT > NC_000913/1483819‑1483997
|
cGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTg < 1:4788163/93‑1 (MQ=255)
ggTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGa > 1:4108898/1‑93 (MQ=255)
ggTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGa < 2:1759071/93‑1 (MQ=255)
gTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAg > 2:1318574/1‑93 (MQ=255)
tACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGTCCTTGAgc < 2:6110236/93‑1 (MQ=255)
tACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTGTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAgc > 1:4427808/1‑93 (MQ=255)
aCGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAgcg > 2:5492409/1‑93 (MQ=255)
cGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAgcgc > 1:3455643/1‑93 (MQ=255)
cGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAg > 1:1298605/1‑93 (MQ=255)
tAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGtt > 1:3191515/1‑93 (MQ=255)
tAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGtt > 2:1643214/1‑93 (MQ=255)
aaTTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGTCTTGAGCGCGATTTa > 2:3328093/1‑93 (MQ=255)
aaTTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTa > 2:4202610/1‑93 (MQ=255)
aaTTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTa > 2:4260173/1‑93 (MQ=255)
aTTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTAc > 2:5766756/1‑93 (MQ=255)
tttGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTAcgg < 1:1472705/93‑1 (MQ=255)
ttGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTAcggc < 2:3866563/93‑1 (MQ=255)
tGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTAcggct < 1:5945164/93‑2 (MQ=255)
tACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGa > 2:723007/1‑93 (MQ=255)
cgcgCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTCGAGCGCGAGTTACGGCGGATGAc < 1:1934302/93‑1 (MQ=255)
gcgcCAAACTATGCCGAAGCGTTTTTAGGCCGTGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGAcc < 2:1424395/93‑1 (MQ=255)
ccgcCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGAcc < 1:1719155/92‑1 (MQ=255)
cgcCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCg < 1:511062/93‑1 (MQ=255)
gcCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGAcccg > 1:1152760/1‑91 (MQ=255)
ccAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGc < 2:3632739/93‑1 (MQ=255)
cAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCg > 1:64805/1‑93 (MQ=255)
aaaCTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGt < 1:6126781/93‑1 (MQ=255)
aaaCTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGt > 2:3089852/1‑93 (MQ=255)
aaaCTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGt < 1:2246364/93‑1 (MQ=255)
aaCTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGtt < 1:383099/93‑1 (MQ=255)
aaCTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGtt > 2:4684211/1‑93 (MQ=255)
aaCTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGtt > 1:4712419/1‑93 (MQ=255)
aaCTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGtt > 1:1534200/1‑93 (MQ=255)
aCTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGGTa > 2:5579576/1‑93 (MQ=255)
aCTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGCTACGGCGGATGACCCGCGGTa > 2:113546/1‑93 (MQ=255)
cTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTAc < 1:5397245/93‑1 (MQ=255)
cTATGCCGAAGCGTTTTTAGGCCGCATCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTAc < 1:502796/93‑1 (MQ=255)
tATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGCTACGGCGGATGCACCGCGTTAcc > 2:3768523/1‑93 (MQ=255)
gCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGtt < 2:5267459/93‑1 (MQ=255)
ccGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTg > 2:5094506/1‑93 (MQ=255)
gAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGAc < 1:2420723/93‑1 (MQ=255)
gAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGAc < 2:2298799/93‑1 (MQ=255)
aaGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGAcc < 1:356763/93‑1 (MQ=255)
aaGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGAcc > 1:748118/1‑93 (MQ=255)
aGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACcg < 2:1157015/93‑1 (MQ=255)
aGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCCGCGTTTCCGTTGACcg > 1:837666/1‑93 (MQ=255)
gCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCCTTGACcgc > 1:970134/1‑93 (MQ=255)
tttttAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGaa > 2:4742557/1‑93 (MQ=255)
tttttAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGaa > 2:5803450/1‑93 (MQ=255)
ttttAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAg < 2:1527054/93‑1 (MQ=255)
ttAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGAc < 2:5686518/93‑1 (MQ=255)
tAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACt < 2:4426929/93‑1 (MQ=255)
aGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTg < 1:3930475/93‑1 (MQ=255)
ggCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTgg < 2:4913889/93‑1 (MQ=255)
ggCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTgg < 1:1607776/93‑1 (MQ=255)
ccGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCa < 1:3669564/93‑1 (MQ=255)
cgcgTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCAc > 2:5970102/1‑93 (MQ=255)
cgcgTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCAc < 2:4031053/93‑1 (MQ=255)
gcgTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACt > 2:2052964/1‑93 (MQ=255)
cgTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTg > 2:1792303/1‑93 (MQ=255)
gTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTgg > 1:1023286/1‑93 (MQ=255)
gTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTgg < 1:2619826/93‑1 (MQ=255)
gTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTgg < 2:4944798/93‑1 (MQ=255)
tCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTggg > 1:2120730/1‑93 (MQ=255)
tCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGGTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTggg > 2:1205079/1‑93 (MQ=255)
cAAGCCGCTGGAGTTGCCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGa < 2:1067378/93‑1 (MQ=255)
cAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGa > 1:2697617/1‑93 (MQ=255)
aaaCCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGAt > 2:3211291/1‑93 (MQ=255)
aaCCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGGTc > 2:4430625/1‑93 (MQ=255)
aaCCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATc > 1:2916615/1‑93 (MQ=255)
aCCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCa > 2:2925478/1‑93 (MQ=255)
ccGCTGTAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGGCCGGCGTTCCCGTTGACCGCGAAGACTGGCACTGGGATCAg < 1:3345621/93‑1 (MQ=255)
ccGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAg < 2:3138899/93‑1 (MQ=255)
cGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGGCTGGCACGGGGATCAgg > 1:4111921/1‑93 (MQ=255)
gCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGt < 2:6045683/93‑1 (MQ=255)
cTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGGCCGGCGTTACCGCTGACCGGGGAGACTGGCAGTGGGATGAGGTg > 2:2775863/1‑93 (MQ=255)
cTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTg < 1:537465/93‑1 (MQ=255)
cTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTg > 2:1930021/1‑93 (MQ=255)
tGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGc > 2:3054141/1‑93 (MQ=255)
tGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTCGCACTGGGATCAGGTGc > 2:2618542/1‑93 (MQ=255)
ggAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACTGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGcc > 1:1242910/1‑93 (MQ=255)
ggAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGcc > 1:4323926/1‑93 (MQ=255)
ggAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGcc > 1:5492148/1‑93 (MQ=255)
gAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGccc < 1:6035249/93‑1 (MQ=255)
ttACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGAt < 2:4634288/93‑1 (MQ=255)
tACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATc < 1:6118661/93‑1 (MQ=255)
cGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCAcc < 1:559679/93‑1 (MQ=255)
cGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCAcc < 2:217719/93‑1 (MQ=255)
cGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCAcc > 1:3304919/1‑93 (MQ=255)
gTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCt > 1:1709170/1‑93 (MQ=255)
gTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCt < 2:2858811/93‑1 (MQ=255)
gTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCt > 1:1391852/1‑93 (MQ=255)
gTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCt > 1:721097/1‑93 (MQ=255)
tGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGa < 2:681132/93‑1 (MQ=255)
tGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGa < 1:4240853/93‑1 (MQ=255)
tCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGaaaa > 1:6223062/1‑93 (MQ=255)
tCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGaaaa > 2:6192678/1‑93 (MQ=255)
cGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAAt < 2:528186/93‑1 (MQ=255)
gACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAAtt > 1:566655/1‑93 (MQ=255)
gACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGGTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAAtt > 2:4559499/1‑93 (MQ=255)
|
AACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACAGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATT > NC_000913/1483819‑1483997
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGAAACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACAGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATTACC > NC_000913/1483815‑1484000
|
CCGAAACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACG > SRR4302533.5241236/1‑94 (MQ=60)
CCGAAACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACG > SRR4302533.1445487/1‑94 (MQ=60)
CGAAACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGG > SRR4302533.571950/1‑94 (MQ=60)
AAACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCC > SRR4302533.5510096/1‑94 (MQ=60)
AACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCT > SRR4302533.6317242/1‑94 (MQ=60)
ACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTT < SRR4302533.1554259/94‑1 (MQ=60)
CGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGA > SRR4302533.4133880/1‑94 (MQ=60)
CGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGA > SRR4302533.4133881/1‑94 (MQ=60)
CGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGA < SRR4302533.4817164/94‑1 (MQ=60)
GGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAG > SRR4302533.5422480/1‑94 (MQ=60)
GTGCGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGC < SRR4302533.2011829/94‑1 (MQ=60)
GTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTGTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGC > SRR4302533.4454573/1‑94 (MQ=60)
ACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGC > SRR4302533.3476970/1‑94 (MQ=60)
GCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGA < SRR4302533.6072173/94‑1 (MQ=60)
CCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAG > SRR4302533.1306421/1‑94 (MQ=60)
CGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGT > SRR4302533.2888645/1‑94 (MQ=60)
CGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGT > SRR4302533.510898/1‑94 (MQ=60)
CGTAATTTTGTACCCGCGCCAAACTATCCCGAAGCGCCTTTAGGCCGCGTCTCACCGCTGGAGTTACCGTTGCTCGACCGCCTTGAGCGGGAGT > SRR4302533.2100370/1‑94 (MQ=60)
GTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTT > SRR4302533.1108319/1‑94 (MQ=60)
GTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTT > SRR4302533.3211148/1‑94 (MQ=60)
AATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTAC < SRR4302533.3675800/94‑1 (MQ=60)
ATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACG > SRR4302533.6212938/1‑94 (MQ=60)
TTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGC < SRR4302533.1481605/94‑1 (MQ=60)
TGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCTG < SRR4302533.5981117/94‑1 (MQ=60)
GTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGG > SRR4302533.81443/1‑94 (MQ=60)
TACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGAT < SRR4302533.2264672/94‑1 (MQ=60)
ACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATG < SRR4302533.2444266/94‑1 (MQ=60)
CGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTCGAGCGCGAGTTACGGCGGATGACC < SRR4302533.1946103/94‑1 (MQ=60)
CCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCG < SRR4302533.1729580/94‑1 (MQ=60)
CGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGG > SRR4302533.6156145/1‑94 (MQ=60)
CGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGG > SRR4302533.920035/1‑94 (MQ=60)
CGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGG < SRR4302533.514100/94‑1 (MQ=60)
CGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCCG > SRR4302533.1159663/1‑94 (MQ=60)
GCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGG > SRR4302533.1711708/1‑94 (MQ=60)
CCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCG > SRR4302533.65225/1‑94 (MQ=60)
AAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTT < SRR4302533.2260245/94‑1 (MQ=60)
AAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTT > SRR4302533.1931743/1‑94 (MQ=60)
AAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTT < SRR4302533.6163709/94‑1 (MQ=60)
AAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTT > SRR4302533.4740980/1‑94 (MQ=60)
AAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTT > SRR4302533.1543416/1‑94 (MQ=60)
AACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTA < SRR4302533.385413/94‑1 (MQ=60)
ACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTAC < SRR4302533.3552950/94‑1 (MQ=60)
CTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACC < SRR4302533.5429678/94‑1 (MQ=60)
CTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACC < SRR4302533.4340684/94‑1 (MQ=60)
CTATGCCGAAGCGTTTTTAGGCCGCATCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACC < SRR4302533.505785/94‑1 (MQ=60)
CGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGAC > SRR4302533.3332630/1‑94 (MQ=60)
GAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACC > SRR4302533.752522/1‑94 (MQ=60)
GAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACC > SRR4302533.4882413/1‑94 (MQ=60)
GAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACC < SRR4302533.2435672/94‑1 (MQ=60)
AAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCG < SRR4302533.358938/94‑1 (MQ=60)
AAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCG > SRR4302533.3084065/1‑94 (MQ=60)
AAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCCGCGTTTCCGTTGACCG > SRR4302533.842574/1‑94 (MQ=60)
AGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCCTTGACCGC > SRR4302533.975824/1‑94 (MQ=60)
acggTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCG < SRR4302533.1527247/90‑1 (MQ=60)
TTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAG > SRR4302533.68888/1‑94 (MQ=60)
TTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGA > SRR4302533.4393751/1‑94 (MQ=60)
AGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGG < SRR4302533.3954469/94‑1 (MQ=60)
AGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGG < SRR4302533.5358795/94‑1 (MQ=60)
GGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGC < SRR4302533.1617531/94‑1 (MQ=60)
GCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCA < SRR4302533.1447267/94‑1 (MQ=60)
CCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCAC < SRR4302533.3692121/94‑1 (MQ=60)
CGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACT < SRR4302533.4000380/94‑1 (MQ=60)
CGCGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACT > SRR4302533.4246651/1‑94 (MQ=60)
CGTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGG > SRR4302533.1029300/1‑94 (MQ=60)
GTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGG > SRR4302533.2133805/1‑94 (MQ=60)
GTCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGG < SRR4302533.2635908/94‑1 (MQ=60)
TCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGA > SRR4302533.2714145/1‑94 (MQ=60)
TCAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGA < SRR4302533.3470925/94‑1 (MQ=60)
CAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGAT > SRR4302533.373994/1‑94 (MQ=60)
CAAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGAT < SRR4302533.5657588/94‑1 (MQ=60)
AAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGCAGACTGGCACTGGGATC > SRR4302533.5400516/1‑94 (MQ=60)
AAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATC < SRR4302533.2183051/94‑1 (MQ=60)
AAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATC > SRR4302533.2934497/1‑94 (MQ=60)
AAACCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGGTACCGGTGACCGCGAAGACTGGCAGTGGGATC > SRR4302533.1172427/1‑94 (MQ=60)
CCGCTGTAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGGCCGGCGTTCCCGTTGACCGCGAAGACTGGCACTGGGATCAGG < SRR4302533.3366291/94‑1 (MQ=60)
CCGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGGCTGGCACGGGGATCAGG > SRR4302533.4136915/1‑94 (MQ=60)
CGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGT < SRR4302533.3872090/94‑1 (MQ=60)
CGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGT < SRR4302533.1300459/94‑1 (MQ=60)
CGCTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGT > SRR4302533.5594663/1‑94 (MQ=60)
CTGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGC < SRR4302533.540662/94‑1 (MQ=60)
TGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACTGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCC > SRR4302533.1250331/1‑94 (MQ=60)
TGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCC > SRR4302533.5525276/1‑94 (MQ=60)
TGGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCC > SRR4302533.4349963/1‑94 (MQ=60)
GGAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCC < SRR4302533.728022/94‑1 (MQ=60)
GAGTTACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCG < SRR4302533.6071823/94‑1 (MQ=60)
TACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCA > SRR4302533.1725559/1‑94 (MQ=60)
TACCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCA < SRR4302533.6155562/94‑1 (MQ=60)
CCGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACC > SRR4302533.3325329/1‑94 (MQ=60)
CGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCT < SRR4302533.563002/94‑1 (MQ=60)
CGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCT > SRR4302533.1719527/1‑94 (MQ=60)
CGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCT > SRR4302533.725351/1‑94 (MQ=60)
CGTTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCT > SRR4302533.1400237/1‑94 (MQ=60)
TTGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGA < SRR4302533.132936/94‑1 (MQ=60)
TGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAA < SRR4302533.4266462/94‑1 (MQ=60)
TGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAA < SRR4302533.3302303/94‑1 (MQ=60)
TGCTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAA > SRR4302533.4808116/1‑94 (MQ=60)
CTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAA > SRR4302533.463855/1‑94 (MQ=60)
CTCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAA > SRR4302533.6260357/1‑94 (MQ=60)
TCGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAAT < SRR4302533.6030441/94‑1 (MQ=60)
CGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGCTCAGGTGCCCGATCACCTGAAAATT > SRR4302533.2681229/1‑94 (MQ=60)
CGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATT > SRR4302533.570010/1‑94 (MQ=60)
CGACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATT > SRR4302533.5729642/1‑94 (MQ=60)
GACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATTA > SRR4302533.280625/1‑94 (MQ=60)
GACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATTA > SRR4302533.2132107/1‑94 (MQ=60)
ACGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATTAC < SRR4302533.3183801/94‑1 (MQ=60)
CGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATTACC < SRR4302533.566097/94‑1 (MQ=60)
CGGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATTACC < SRR4302533.5839063/94‑1 (MQ=60)
|
CCGAAACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACAGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATTACC > NC_000913/1483815‑1484000
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
