Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,497,599 |
T→C |
H292R (CAC→CGC) |
b1428 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,497,599 | 0 | T | C | 100.0%
| 704.3
/ NA
| 219 | H292R (CAC→CGC) | b1428 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (101/118); total (101/118) |
Only 100 of 230 total aligned reads displayed.
AGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGTGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCAGAA > NC_000913/1497509‑1497686
|
gcggcgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGt < 1:3824102/93‑1 (MQ=255)
gcggcgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGt < 2:2665906/93‑1 (MQ=255)
gcggcgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGt < 1:1685515/93‑1 (MQ=255)
cggcgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTc < 2:3717340/93‑1 (MQ=255)
cggcgTTCGCGTAATGCGCTCCTCGCCGGTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTAACAGACGGCGCGGtg > 2:729264/1‑92 (MQ=255)
ggcgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCg < 1:5880550/93‑1 (MQ=255)
ggcgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCg < 2:1244111/93‑1 (MQ=255)
ggcgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCg > 1:5045683/1‑93 (MQ=255)
ggcgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCg > 2:4533978/1‑93 (MQ=255)
ggcgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCg < 2:6202213/93‑1 (MQ=255)
gcgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCgg > 1:5281596/1‑93 (MQ=255)
gcgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCgg > 1:2497451/1‑93 (MQ=255)
cgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGcggtcggt < 1:2865007/93‑1 (MQ=255)
cgTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGcggtcggt < 1:3144473/93‑1 (MQ=255)
gTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGtt < 2:1384044/93‑1 (MQ=255)
gTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGtt > 2:4929472/1‑93 (MQ=255)
gTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGtt > 1:3302019/1‑93 (MQ=255)
ttCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTa > 2:4152591/1‑93 (MQ=255)
cgcgTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAAc < 2:640173/93‑1 (MQ=255)
cgTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGAGCGGTCGGTTAACTc > 1:3654855/1‑93 (MQ=255)
gTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTcc > 2:4239128/1‑93 (MQ=255)
tAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCca > 2:2325296/1‑93 (MQ=255)
aaTGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCcac > 2:331994/1‑93 (MQ=255)
aaTGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCcac > 2:1785821/1‑93 (MQ=255)
aTGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCcaca > 2:3726436/1‑93 (MQ=255)
aTGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCcaca < 1:734454/93‑1 (MQ=255)
tGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACAt < 1:1521979/93‑1 (MQ=255)
gcTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGt < 1:3942481/93‑1 (MQ=255)
gcTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGt < 2:2267379/93‑1 (MQ=255)
gcTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGt > 2:3872173/1‑93 (MQ=255)
gcTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGt < 2:4821459/93‑1 (MQ=255)
ctcctcGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGtt < 1:4566576/93‑1 (MQ=255)
tcctcGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGttt > 2:4988124/1‑93 (MQ=255)
cctcGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGtttt > 2:3030966/1‑93 (MQ=255)
ctcGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTc < 2:1351449/93‑1 (MQ=255)
tcGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCa > 2:1457155/1‑93 (MQ=255)
cGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTa < 2:4613763/93‑1 (MQ=255)
cGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTa < 1:1639314/93‑1 (MQ=255)
cGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTa < 1:1225132/93‑1 (MQ=255)
cGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTa < 2:5933659/93‑1 (MQ=255)
cGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCAATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTa < 1:5004252/93‑1 (MQ=255)
ttAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATc < 2:2931346/93‑1 (MQ=255)
tAATGACTTTTGGACCACGGGCATTAACCGTGTCGCCATCCAAGGGTTCAAAGACGGCGCGGTCGGGTAAATCCACATGGGTTTCACTTATcc > 2:4835180/1‑92 (MQ=255)
tAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCa < 1:4071490/93‑1 (MQ=255)
tAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCa < 2:321541/93‑1 (MQ=255)
aaTGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCAc < 1:5147380/93‑1 (MQ=255)
aaTGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCAc < 2:3382226/93‑1 (MQ=255)
aaTGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCAc < 1:478960/93‑1 (MQ=255)
aaTGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGGTAACTCCACATGGTTTTCAATTATCAc > 2:5461991/1‑93 (MQ=255)
aaTGACTTTGGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCAc < 2:2960559/93‑1 (MQ=255)
aTGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCAcc < 1:1926576/93‑1 (MQ=255)
tGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCg > 2:4363901/1‑93 (MQ=255)
gACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGc > 2:2776390/1‑93 (MQ=255)
cTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCAc < 2:2184199/93‑1 (MQ=255)
tttGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCt > 2:4108643/1‑93 (MQ=255)
ggACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTa < 2:3524728/93‑1 (MQ=255)
ccACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATa < 1:411788/93‑1 (MQ=255)
ccACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATa < 1:5967167/93‑1 (MQ=255)
ccACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATa < 1:5580166/93‑1 (MQ=255)
ccACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATa < 1:1129283/93‑1 (MQ=255)
aCGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACg < 2:662375/93‑1 (MQ=255)
cGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACgg < 2:3143094/93‑1 (MQ=255)
gACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGct > 2:1922464/1‑93 (MQ=255)
gACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGct > 1:1734602/1‑93 (MQ=255)
gACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGct > 1:212231/1‑93 (MQ=255)
aTGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCtctc > 1:78500/1‑93 (MQ=255)
aTGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCtctc > 1:1057812/1‑93 (MQ=255)
tGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCa < 1:2646055/93‑1 (MQ=255)
gAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCAc < 2:5640684/93‑1 (MQ=255)
gAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCAc > 2:5597526/1‑93 (MQ=255)
aCCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCt > 1:634619/1‑93 (MQ=255)
aCCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCt > 2:1085415/1‑93 (MQ=255)
ccGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCtt > 1:1210345/1‑93 (MQ=255)
ccGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCtt > 2:2115416/1‑93 (MQ=255)
gtgtCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGt > 1:1429417/1‑93 (MQ=255)
tgtCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTa < 1:905000/93‑1 (MQ=255)
tgtCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGCCTCTCACCTTGTa < 1:561642/93‑1 (MQ=255)
gtCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTCTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTAt < 1:5824586/93‑1 (MQ=255)
tCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATg < 2:5377479/93‑1 (MQ=255)
tCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATg < 2:2428025/93‑1 (MQ=255)
ccATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACa > 2:5069259/1‑93 (MQ=255)
cATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACaa > 1:5323913/1‑93 (MQ=255)
cATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACaa > 1:2746983/1‑93 (MQ=255)
cATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACaa < 1:1308241/93‑1 (MQ=255)
aTCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAAc > 1:2047138/1‑93 (MQ=255)
cAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGt > 1:5254941/1‑93 (MQ=255)
aaGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGc > 1:6119095/1‑93 (MQ=255)
aaGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGc < 2:2517513/93‑1 (MQ=255)
aGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCt > 2:5006171/1‑93 (MQ=255)
gCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCtcg < 2:459973/93‑1 (MQ=255)
cTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCtcgt > 1:2189941/1‑93 (MQ=255)
tgcAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCtcgtc < 1:2309742/91‑1 (MQ=255)
tCAACGACGGCGCGGTCTGTTAACTCCACATTGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCtcgtcg < 2:3649089/93‑1 (MQ=255)
cAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTTTCACCTTGTATGACACCGTGCTCGTCGa < 2:3110801/93‑1 (MQ=255)
cAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGa > 2:2609528/1‑93 (MQ=255)
acgacgGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGc < 2:1726411/93‑1 (MQ=255)
acgacgGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGc < 2:6077329/93‑1 (MQ=255)
acgacgGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGc < 1:960891/93‑1 (MQ=255)
gacgGCGCGGTCTGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCAg > 1:3404332/1‑93 (MQ=255)
acgGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCAGa < 2:2746579/93‑1 (MQ=255)
|
AGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGTGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCAGAA > NC_000913/1497509‑1497686
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCAGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGTGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCAGAATCGGTC > NC_000913/1497506‑1497692
|
GCCAGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGC > SRR4302533.3131801/1‑94 (MQ=60)
CCAGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCG < SRR4302533.6022876/94‑1 (MQ=60)
AGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGT > SRR4302533.3351922/1‑94 (MQ=60)
AGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGT > SRR4302533.2123384/1‑94 (MQ=60)
GCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTC < SRR4302533.5925950/94‑1 (MQ=60)
GCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTC < SRR4302533.3847481/94‑1 (MQ=60)
GCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTC < SRR4302533.2746014/94‑1 (MQ=60)
GCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTC < SRR4302533.1695729/94‑1 (MQ=60)
CGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCG > SRR4302533.5076210/1‑94 (MQ=60)
GGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGG < SRR4302533.5916086/94‑1 (MQ=60)
GGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGG > SRR4302533.2512858/1‑94 (MQ=60)
GGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGG > SRR4302533.2014458/1‑94 (MQ=60)
GGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGG > SRR4302533.5313243/1‑94 (MQ=60)
CGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTT > SRR4302533.3322407/1‑94 (MQ=60)
CGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTT < SRR4302533.3163805/94‑1 (MQ=60)
CGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTT < SRR4302533.2882633/94‑1 (MQ=60)
GTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTA < SRR4302533.926510/94‑1 (MQ=60)
TCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGAACACGGACATGAACCGCGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGCTAAC > SRR4302533.2165800/1‑94 (MQ=60)
CGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACT > SRR4302533.66445/1‑94 (MQ=60)
CGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACT < SRR4302533.4104351/94‑1 (MQ=60)
CGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACT > SRR4302533.448516/1‑94 (MQ=60)
GCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGAGCGGTCGGTTAACTC > SRR4302533.3677323/1‑94 (MQ=60)
CGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCC > SRR4302533.5351417/1‑94 (MQ=60)
CGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCC > SRR4302533.5678779/1‑94 (MQ=60)
TAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCAC > SRR4302533.1470762/1‑94 (MQ=60)
TAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCAC > SRR4302533.3560457/1‑94 (MQ=60)
AATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACA < SRR4302533.5068874/94‑1 (MQ=60)
AATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACA > SRR4302533.5882563/1‑94 (MQ=60)
AATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACA > SRR4302533.3900829/1‑94 (MQ=60)
AATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACA < SRR4302533.1164477/94‑1 (MQ=60)
ATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACAT < SRR4302533.738776/94‑1 (MQ=60)
TGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATG < SRR4302533.1531141/94‑1 (MQ=60)
TGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATG < SRR4302533.1558789/94‑1 (MQ=60)
GCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGG < SRR4302533.1120217/94‑1 (MQ=60)
GCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTT > SRR4302533.122277/1‑94 (MQ=60)
GCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTT < SRR4302533.3966537/94‑1 (MQ=60)
GCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCAGTCGGTTAACTCCACATGGTT > SRR4302533.1724777/1‑94 (MQ=60)
CTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTT < SRR4302533.4594261/94‑1 (MQ=60)
TCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTT > SRR4302533.1266475/1‑94 (MQ=60)
CTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCA > SRR4302533.4318833/1‑94 (MQ=60)
CTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCA < SRR4302533.5649750/94‑1 (MQ=60)
CTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGCTCGGTTAACTCCACATGGTTTTCA < SRR4302533.3171061/94‑1 (MQ=60)
CCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTA > SRR4302533.765437/1‑94 (MQ=60)
CCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTA > SRR4302533.4878208/1‑94 (MQ=60)
CGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTAT < SRR4302533.1232475/94‑1 (MQ=60)
CGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTAT < SRR4302533.1649240/94‑1 (MQ=60)
CGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCAATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTAT < SRR4302533.5034580/94‑1 (MQ=60)
TTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCA > SRR4302533.2730889/1‑94 (MQ=60)
TAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCAC < SRR4302533.3971580/94‑1 (MQ=60)
TAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCAC < SRR4302533.4096277/94‑1 (MQ=60)
TAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCAC < SRR4302533.6120575/94‑1 (MQ=60)
AATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACC < SRR4302533.5178484/94‑1 (MQ=60)
AATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACC < SRR4302533.481822/94‑1 (MQ=60)
ATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCG < SRR4302533.1938333/94‑1 (MQ=60)
TTTTGGACCACGGACATGAGCCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCT < SRR4302533.6280340/94‑1 (MQ=60)
TGGCCCACGGACAGGATCCTTGTCGCCATCAAAGGCTGCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTA < SRR4302533.4204807/94‑1 (MQ=60)
GGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAA > SRR4302533.1834716/1‑94 (MQ=60)
GACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAAT < SRR4302533.2766992/94‑1 (MQ=60)
CCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTGATAC > SRR4302533.842071/1‑94 (MQ=60)
CCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATAC < SRR4302533.6003289/94‑1 (MQ=60)
CCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATAC < SRR4302533.1135994/94‑1 (MQ=60)
CCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATAC > SRR4302533.38943/1‑94 (MQ=60)
CCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATAC < SRR4302533.5548168/94‑1 (MQ=60)
CCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATAC < SRR4302533.5613889/94‑1 (MQ=60)
CCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATAC < SRR4302533.414260/94‑1 (MQ=60)
CACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACG < SRR4302533.2555906/94‑1 (MQ=60)
CGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGC < SRR4302533.1315079/94‑1 (MQ=60)
CGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGC > SRR4302533.5315262/1‑94 (MQ=60)
GGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCT > SRR4302533.213567/1‑94 (MQ=60)
GGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCT > SRR4302533.1745127/1‑94 (MQ=60)
GGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCT > SRR4302533.2449210/1‑94 (MQ=60)
GACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTC < SRR4302533.5306972/94‑1 (MQ=60)
CATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTC > SRR4302533.1064034/1‑94 (MQ=60)
CATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTC > SRR4302533.79003/1‑94 (MQ=60)
TGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCAC < SRR4302533.2662315/94‑1 (MQ=60)
TGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCAC < SRR4302533.3189506/94‑1 (MQ=60)
AACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCT > SRR4302533.638351/1‑94 (MQ=60)
AACCGTGTCACCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCT < SRR4302533.1359319/94‑1 (MQ=60)
ACCGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTT > SRR4302533.1217613/1‑94 (MQ=60)
CGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGT > SRR4302533.5075268/1‑94 (MQ=60)
CGTGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGT > SRR4302533.1438059/1‑94 (MQ=60)
TGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTAT < SRR4302533.910305/94‑1 (MQ=60)
TGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTAT < SRR4302533.6046420/94‑1 (MQ=60)
TGTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGCCTCTCACCTTGTAT < SRR4302533.564974/94‑1 (MQ=60)
GTCGCCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTCTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATG < SRR4302533.5859771/94‑1 (MQ=60)
TCGCCATCAAAGGCTTGAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGA < SRR4302533.4712037/94‑1 (MQ=60)
CCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAA > SRR4302533.2763824/1‑94 (MQ=60)
CCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAA > SRR4302533.5355819/1‑94 (MQ=60)
CCATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAA > SRR4302533.1657739/1‑94 (MQ=60)
CATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAAC > SRR4302533.2059762/1‑94 (MQ=60)
CATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAAC < SRR4302533.1316095/94‑1 (MQ=60)
ATCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACG < SRR4302533.5791278/94‑1 (MQ=60)
TCAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGT > SRR4302533.5286508/1‑94 (MQ=60)
CAAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTG < SRR4302533.2206287/94‑1 (MQ=60)
AAAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGC > SRR4302533.6155998/1‑94 (MQ=60)
AAGGCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCT < SRR4302533.5152024/94‑1 (MQ=60)
GCTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGT > SRR4302533.2203433/1‑94 (MQ=60)
CTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTC > SRR4302533.3771379/1‑94 (MQ=60)
CTTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTC > SRR4302533.5187158/1‑94 (MQ=60)
TTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCG < SRR4302533.3154709/94‑1 (MQ=60)
TTCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCG > SRR4302533.1577576/1‑94 (MQ=60)
TGCAACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCG < SRR4302533.2324049/94‑1 (MQ=60)
AACGACGGCGCGGTCGGTTTACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGC > SRR4302533.906799/1‑94 (MQ=60)
ACGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCA < SRR4302533.966537/94‑1 (MQ=60)
CGACGGCGCGGTCTGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCAG > SRR4302533.3425354/1‑94 (MQ=60)
CGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCAG < SRR4302533.2287495/94‑1 (MQ=60)
CGACGGCGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCAG > SRR4302533.1858779/1‑94 (MQ=60)
CGCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCAGAATCGG > SRR4302533.267304/1‑94 (MQ=60)
GCGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCAGAATCGGT > SRR4302533.2951750/1‑94 (MQ=60)
CGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCAGAATCGGTC < SRR4302533.1847034/94‑1 (MQ=60)
|
GCCAGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGTGGTCGGTTAACTCCACATGGTTTTCAATTATCACCGCACCTGTAATACGGCTCTCACCTTGTATGACAACGTGCTCGTCGAGCAGAATCGGTC > NC_000913/1497506‑1497692
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
