Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate | Predicted Mutations | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
|---|---|---|---|---|---|---|
| A1 F1 I2 R1 | 1624 | 250.6 | 12620048 | 98.0% | 12367647 | 93.0 |
Breseq alignment
| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,512,790 | A→G | A312A (GCA→GCG) H2R (CAC→CGC) |
b1442 → b1443 → |
putative transport system permease protein putative transport system permease protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,512,790 | 0 | A | G | 100.0% | 657.5 / NA | 201 | A312A (GCA→GCG) H2R (CAC→CGC) | b1442 b1443 | putative transport system permease protein putative transport system permease protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (87/114); total (87/114) | |||||||||||
Only 100 of 207 total aligned reads displayed.
TATGCCGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCACTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATG > NC_000913/1512700‑1512879 | tatGCCGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGct > 2:5476473/1‑93 (MQ=255) gCCGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTg < 1:1269160/93‑1 (MQ=255) ccGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGa > 1:3696625/1‑93 (MQ=255) cGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGaa < 2:1744561/93‑1 (MQ=255) cGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGaa < 1:2238285/93‑1 (MQ=255) gATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAAc > 2:798711/1‑93 (MQ=255) gATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAAc < 2:4723170/93‑1 (MQ=255) gcggcATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCAcc > 1:5580962/1‑93 (MQ=255) gcggcATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCAcc > 1:638533/1‑93 (MQ=255) gcggcATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCAcc < 2:30107/93‑1 (MQ=255) aTTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGtttt > 2:3880293/1‑93 (MQ=255) ttCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGttttt > 1:2934416/1‑93 (MQ=255) tCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTc < 1:5397667/93‑1 (MQ=255) tCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTc > 1:5171979/1‑93 (MQ=255) tCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTc < 2:5235278/93‑1 (MQ=255) cACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTcc < 2:3138807/93‑1 (MQ=255) ccccTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCt < 2:2898300/92‑1 (MQ=255) cccTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTc < 2:2586008/93‑1 (MQ=255) tGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCaaa > 1:5081393/1‑93 (MQ=255) gTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACt < 1:2834180/93‑1 (MQ=255) tGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTg > 2:3439050/1‑93 (MQ=255) gCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTgg < 2:4247768/93‑1 (MQ=255) gCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTgg > 2:3172231/1‑93 (MQ=255) gCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTgg < 1:3486445/93‑1 (MQ=255) gCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTgg > 1:165186/1‑93 (MQ=255) cGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCAGCGTTTTTCCTCAAACTggcg < 2:3938301/93‑1 (MQ=255) cGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTggcg < 2:1563608/93‑1 (MQ=255) cGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTggcg < 2:6160996/93‑1 (MQ=255) gATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTggcgg < 2:3945070/93‑1 (MQ=255) ttattCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGcc < 2:4618462/93‑1 (MQ=255) tattCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCt > 1:1078199/1‑93 (MQ=255) tattCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCt > 2:3641739/1‑93 (MQ=255) attCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTg < 2:1517922/93‑1 (MQ=255) attCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTg < 2:1319814/93‑1 (MQ=255) ttCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTgg > 1:3773178/1‑93 (MQ=255) tctcATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTggg < 1:5192723/93‑1 (MQ=255) tctcATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTggg > 2:5714443/1‑93 (MQ=255) ctcATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTgggg < 1:897900/93‑1 (MQ=255) ctcATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTgggg < 2:1295760/93‑1 (MQ=255) acATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGggc > 1:5941950/2‑93 (MQ=255) cATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGggcg < 1:1725840/93‑1 (MQ=255) cATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGggcg > 1:1993329/1‑93 (MQ=255) cATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGggcg < 2:3757761/93‑1 (MQ=255) aTCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGggcgg < 2:3592519/93‑1 (MQ=255) aTCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGggcgg > 1:1020167/1‑93 (MQ=255) aTCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGggcgg > 2:2506308/1‑93 (MQ=255) tCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGggcggc < 1:1503644/93‑1 (MQ=255) gCACTGTCCCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCgt < 1:6221267/93‑1 (MQ=255) cACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCgtt > 1:2038070/1‑93 (MQ=255) cACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCgtt < 2:3285225/93‑1 (MQ=255) tACCTGGCGTTCGTTAAACGGCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCATCAAACTGGCGGCCTGGGGCGGCGTTGtttt < 2:524970/93‑1 (MQ=255) tACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGtttt < 1:5023834/93‑1 (MQ=255) aCCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTc < 1:1867939/93‑1 (MQ=255) aCCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTc > 2:3859843/1‑93 (MQ=255) ccTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTcc > 2:1523748/1‑93 (MQ=255) tGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGTGGCCTGGGGCGGCGTTGGTTTGCtc > 1:2369636/1‑92 (MQ=255) tGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTTCTa > 2:2556121/1‑93 (MQ=255) tGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTa < 1:2225827/93‑1 (MQ=255) tGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTa < 2:6254531/93‑1 (MQ=255) tGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGGTGTTTTCCTa > 1:5454782/1‑93 (MQ=255) ggCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTAc < 1:4539198/93‑1 (MQ=255) ggCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTAc > 2:5831193/1‑93 (MQ=255) ggCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTAc < 1:3508005/93‑1 (MQ=255) gCGTTCGTGAAACGTCTGGGCGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTAct > 1:5716635/1‑92 (MQ=255) cGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACAt < 1:3029938/93‑1 (MQ=255) gTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACAtt < 2:2223066/93‑1 (MQ=255) gTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACAtt > 2:411588/1‑93 (MQ=255) ttCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACAttt > 2:4458544/1‑93 (MQ=255) tCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACAtttt > 2:4411141/1‑93 (MQ=255) tCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACAtttt > 2:5947805/1‑93 (MQ=255) cGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTc < 2:513289/93‑1 (MQ=255) gTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTCCCTACATTTTcc < 2:5042330/93‑1 (MQ=255) tGAAACGTCTGGGAGCGTTCGATGCGCTCTGCACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTccc > 2:5289902/1‑93 (MQ=255) tGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTccc < 1:488262/93‑1 (MQ=255) gAAACGTCTGGGAGCGGTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCa > 2:722993/1‑93 (MQ=255) aCGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATcc > 1:2672689/1‑93 (MQ=255) cGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCt < 2:4632933/93‑1 (MQ=255) gTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTg > 1:386505/1‑93 (MQ=255) tCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGa < 1:1348784/93‑1 (MQ=255) tCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGa < 2:2486500/93‑1 (MQ=255) tGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATa > 1:5870096/1‑93 (MQ=255) tGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATa < 1:5737805/93‑1 (MQ=255) tGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATa > 1:4427780/1‑93 (MQ=255) gggAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATaa > 2:5272509/1‑93 (MQ=255) ggAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAAt < 1:3648254/93‑1 (MQ=255) gAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATc > 1:1604778/1‑93 (MQ=255) aGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATcg < 1:6196290/93‑1 (MQ=255) gCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATcgc < 2:43486/93‑1 (MQ=255) gCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATcgc < 1:3144063/93‑1 (MQ=255) gCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATcgc < 2:2949274/93‑1 (MQ=255) gCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCATGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATcgc < 2:2086346/93‑1 (MQ=255) cGTTCGATGCGCTCTGACCGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATcgcc < 1:4442753/93‑1 (MQ=255) cGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATcgcc < 1:1062122/93‑1 (MQ=255) cGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATcgcc < 1:17845/93‑1 (MQ=255) gTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATcgccg > 2:4005412/1‑93 (MQ=255) ttCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATcgccgc > 1:2478806/1‑93 (MQ=255) gATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTa < 2:4535997/93‑1 (MQ=255) tGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATg < 2:1024839/93‑1 (MQ=255) tGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATg < 1:3532611/93‑1 (MQ=255) tGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATg > 1:429606/1‑93 (MQ=255) | TATGCCGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCACTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATG > NC_000913/1512700‑1512879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
ATGCCGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCACTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATGCGTT > NC_000913/1512701‑1512883 | ATGCCGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCT > SRR4302533.1065345/1‑94 (MQ=60)ATGCCGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCT < SRR4302533.1074067/94‑1 (MQ=60) GCCGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGA > SRR4302533.3719332/1‑94 (MQ=60) GCCGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGA < SRR4302533.1276756/94‑1 (MQ=60) CGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAAC > SRR4302533.6257300/1‑94 (MQ=60) CGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAAC > SRR4302533.3295568/1‑94 (MQ=60) CGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAAC < SRR4302533.2252117/94‑1 (MQ=60) GATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACG > SRR4302533.16563/1‑94 (MQ=60) GATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACG < SRR4302533.750994/94‑1 (MQ=60) ATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGC < SRR4302533.1801676/94‑1 (MQ=60) CGGCGTCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCAC < SRR4302533.5759034/94‑1 (MQ=60) GGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACC > SRR4302533.642288/1‑94 (MQ=60) GGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACC > SRR4302533.5614688/1‑94 (MQ=60) CGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAAagagcatcgt > SRR4302533.5909065/1‑84 (MQ=60) ATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTT > SRR4302533.2952358/1‑94 (MQ=60) TTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTC > SRR4302533.5203187/1‑94 (MQ=60) TCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCC < SRR4302533.5430102/94‑1 (MQ=60) CACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCT > SRR4302533.2245615/1‑94 (MQ=60) CCCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTC < SRR4302533.628051/94‑1 (MQ=60) CCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAA > SRR4302533.5530516/1‑94 (MQ=60) CCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAA < SRR4302533.3113288/94‑1 (MQ=60) CCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAA > SRR4302533.2456084/1‑94 (MQ=60) CTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAA > SRR4302533.5112104/1‑94 (MQ=60) CTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAA > SRR4302533.1344133/1‑94 (MQ=60) GGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACT < SRR4302533.588940/94‑1 (MQ=60) GTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTG < SRR4302533.2851627/94‑1 (MQ=60) GTGCCGATTATTCTCACCGCACTGTACCTGCCGTTCGTGAACCGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTG < SRR4302533.262308/94‑1 (MQ=60) TGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGG > SRR4302533.166234/1‑94 (MQ=60) TGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGG < SRR4302533.2322592/94‑1 (MQ=60) GCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGTGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGC < SRR4302533.4458112/94‑1 (MQ=60) GCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGC < SRR4302533.3565100/94‑1 (MQ=60) GCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGC < SRR4302533.3507946/94‑1 (MQ=60) CGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGG < SRR4302533.5480129/94‑1 (MQ=60) TTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCT > SRR4302533.1084553/1‑94 (MQ=60) ATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGG > SRR4302533.3796307/1‑94 (MQ=60) TTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGG < SRR4302533.1500496/94‑1 (MQ=60) TTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGG < SRR4302533.5699681/94‑1 (MQ=60) TCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGG < SRR4302533.5224045/94‑1 (MQ=60) TCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGG < SRR4302533.4505219/94‑1 (MQ=60) CTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGC < SRR4302533.903170/94‑1 (MQ=60) CTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGC > SRR4302533.1266205/1‑94 (MQ=60) CTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGC > SRR4302533.3686493/1‑94 (MQ=60) CACATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGC > SRR4302533.5977886/1‑94 (MQ=60) TCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCG > SRR4302533.2005555/1‑94 (MQ=60) TCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCG > SRR4302533.3537872/1‑94 (MQ=60) CATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGG < SRR4302533.1736313/94‑1 (MQ=60) CATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGG > SRR4302533.1026161/1‑94 (MQ=60) CATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGG < SRR4302533.3872596/94‑1 (MQ=60) ATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGC > SRR4302533.4595818/1‑94 (MQ=60) TCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCG < SRR4302533.1512710/94‑1 (MQ=60) GCACTGTCCCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTT < SRR4302533.6258558/94‑1 (MQ=60) GCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTT > SRR4302533.2050639/1‑94 (MQ=60) CACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTG > SRR4302533.5270520/1‑94 (MQ=60) CACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTG > SRR4302533.4408843/1‑94 (MQ=60) ACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGT > SRR4302533.286671/1‑94 (MQ=60) TACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTC < SRR4302533.5054257/94‑1 (MQ=60) ACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCC < SRR4302533.1879326/94‑1 (MQ=60) CTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGTGGCCTGGGGCGGCGTTGgtttgctc > SRR4302533.2384296/1‑86 (MQ=60) CTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGGTGTTTTCCTA > SRR4302533.5487645/1‑94 (MQ=60) CTGGCGTTCGTGAAACGTCTGGGAGCGGTCGATGCGCTCTGAACGCGCAGCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTA > SRR4302533.781605/1‑94 (MQ=60) TGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTAC < SRR4302533.2239567/94‑1 (MQ=60) TGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTAC < SRR4302533.5982829/94‑1 (MQ=60) GGCGTTCGTGAAACGTCTGGGCGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACT > SRR4302533.5751160/1‑94 (MQ=60) GGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACA < SRR4302533.3529637/94‑1 (MQ=60) GGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACA < SRR4302533.4566680/94‑1 (MQ=60) CGTTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATT < SRR4302533.3048481/94‑1 (MQ=60) GGTCGTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTT < SRR4302533.521970/94‑1 (MQ=60) GTGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCC > SRR4302533.19870/1‑94 (MQ=60) TGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCA < SRR4302533.173012/94‑1 (MQ=60) TGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCA < SRR4302533.1777426/94‑1 (MQ=60) TGAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCA < SRR4302533.491183/94‑1 (MQ=60) GAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCAT < SRR4302533.3991327/94‑1 (MQ=60) GAAACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCAT > SRR4302533.3730649/1‑94 (MQ=60) AACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCC > SRR4302533.2689084/1‑94 (MQ=60) ACGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCT < SRR4302533.5113908/94‑1 (MQ=60) CGTCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTG > SRR4302533.388838/1‑94 (MQ=60) TCTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGAT < SRR4302533.1356901/94‑1 (MQ=60) CTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATA > SRR4302533.5905576/1‑94 (MQ=60) CTGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATA > SRR4302533.4454545/1‑94 (MQ=60) TGGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAA < SRR4302533.5772436/94‑1 (MQ=60) GGGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAAT > SRR4302533.3128972/1‑94 (MQ=60) GGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATC < SRR4302533.3670687/94‑1 (MQ=60) GGAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATC > SRR4302533.1614491/1‑94 (MQ=60) GAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCG > SRR4302533.2960999/1‑94 (MQ=60) GAGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCG < SRR4302533.5104494/94‑1 (MQ=60) AGCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGC < SRR4302533.6233463/94‑1 (MQ=60) GCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCC < SRR4302533.2729977/94‑1 (MQ=60) GCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCC < SRR4302533.2025719/94‑1 (MQ=60) GCGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCC < SRR4302533.3163393/94‑1 (MQ=60) CGTTCGATGCGCTCTGACCGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCG < SRR4302533.4469618/94‑1 (MQ=60) CGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCG < SRR4302533.1068362/94‑1 (MQ=60) CGTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCG < SRR4302533.17967/94‑1 (MQ=60) GTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGCTAATCGCCGC > SRR4302533.3516115/1‑94 (MQ=60) GTTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGC > SRR4302533.2494094/1‑94 (MQ=60) TTCGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCC < SRR4302533.5804990/94‑1 (MQ=60) CGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTA > SRR4302533.2078938/1‑94 (MQ=60) CGATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTA > SRR4302533.2254651/1‑94 (MQ=60) GATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTAT < SRR4302533.4123072/94‑1 (MQ=60) ATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATG < SRR4302533.1613657/94‑1 (MQ=60) ATGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATG > SRR4302533.432167/1‑94 (MQ=60) TGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATGC < SRR4302533.4994789/94‑1 (MQ=60) TGCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATGC < SRR4302533.3554380/94‑1 (MQ=60) GCGCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATGCG < SRR4302533.2170105/94‑1 (MQ=60) GCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATGCGTT > SRR4302533.4086725/1‑94 (MQ=60) GCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATGCGTT < SRR4302533.281345/94‑1 (MQ=60) GCTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATGCGTT < SRR4302533.5436287/94‑1 (MQ=60) | ATGCCGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCACTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATGCGTT > NC_000913/1512701‑1512883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |