Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,533,519 |
T→C |
T122A (ACG→GCG) |
yddE ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,533,519 | 0 | T | C | 100.0%
| 750.1
/ NA
| 233 | T122A (ACG→GCG) | yddE | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (111/122); total (111/122) |
Only 100 of 239 total aligned reads displayed.
AGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGTACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGC > NC_000913/1533429‑1533608
|
aGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCAc < 1:4852770/93‑1 (MQ=255)
aGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCAc > 1:3706638/1‑93 (MQ=255)
gCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCAcc > 1:2787589/1‑93 (MQ=255)
gCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCAcc > 1:4848721/1‑93 (MQ=255)
ccTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCt < 1:3018395/93‑1 (MQ=255)
ccTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCt < 1:5336449/93‑1 (MQ=255)
cTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCtt > 2:4122344/1‑93 (MQ=255)
cTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCtt > 2:700872/1‑93 (MQ=255)
ggCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGt < 1:1474931/93‑1 (MQ=255)
gCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGtt > 2:542594/1‑93 (MQ=255)
cAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTc > 2:1757466/1‑93 (MQ=255)
aGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTcc < 2:5355692/93‑1 (MQ=255)
gAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCa > 2:1469572/1‑93 (MQ=255)
gAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCa < 2:940741/93‑1 (MQ=255)
aaTATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAg > 1:4767007/1‑93 (MQ=255)
atatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGc > 2:1361604/1‑93 (MQ=255)
atatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGc < 1:5738322/93‑1 (MQ=255)
atatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGc > 2:5265512/1‑93 (MQ=255)
tatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCg > 1:3531376/1‑93 (MQ=255)
tatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCg < 2:1709259/93‑1 (MQ=255)
tatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCg > 2:26244/1‑93 (MQ=255)
tatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCg > 2:1257262/1‑93 (MQ=255)
atCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGa < 1:720453/93‑1 (MQ=255)
tCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGaa > 1:4103851/1‑93 (MQ=255)
cGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGaaa > 2:5214660/1‑93 (MQ=255)
gTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAAt < 1:5583532/93‑1 (MQ=255)
cgccTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAAt < 2:5078967/91‑1 (MQ=255)
tCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATa > 1:2589683/1‑93 (MQ=255)
tCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATa < 1:4356069/93‑1 (MQ=255)
ccTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATAc > 1:4621244/1‑93 (MQ=255)
aGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATa < 1:940742/93‑1 (MQ=255)
tGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAat < 2:204204/93‑1 (MQ=255)
agaTGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAatca < 1:4012638/93‑1 (MQ=255)
gaTGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAatcat > 1:4384996/1‑93 (MQ=255)
gaTGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAatcat > 2:2020269/1‑93 (MQ=255)
gaTGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAatcat > 1:357284/1‑93 (MQ=255)
aTGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAatcatc < 2:3502775/93‑1 (MQ=255)
aTGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAatcatc < 2:4534935/93‑1 (MQ=255)
tGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCg > 2:569251/1‑93 (MQ=255)
gAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGt < 2:2309052/93‑1 (MQ=255)
gAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGt > 1:4177616/1‑93 (MQ=255)
aaGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGtt < 1:3182335/93‑1 (MQ=255)
aaGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGtt < 2:4745870/93‑1 (MQ=255)
gcgcGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTtgt < 1:2154704/93‑1 (MQ=255)
gcgcGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTtgt > 2:6208846/1‑93 (MQ=255)
cgcgTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTtgtg > 2:3658690/1‑93 (MQ=255)
gcgTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTtgtgt > 1:1214402/1‑92 (MQ=255)
gcgTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGc < 2:1836778/93‑1 (MQ=255)
cgTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCt < 1:3682952/93‑1 (MQ=255)
ttGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCttt < 1:5257420/93‑1 (MQ=255)
ttGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCttt > 1:2864043/1‑93 (MQ=255)
gATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTc < 2:42037/93‑1 (MQ=255)
gATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTc < 1:5304651/93‑1 (MQ=255)
gATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTc > 1:4476653/1‑93 (MQ=255)
gATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTc > 1:3490062/1‑93 (MQ=255)
gATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTc < 2:5888137/93‑1 (MQ=255)
aaTCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGAt < 1:1564439/93‑1 (MQ=255)
aaTCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGAt > 1:5608654/1‑93 (MQ=255)
aTCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATa > 2:3249334/1‑93 (MQ=255)
aTCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATa < 2:256101/93‑1 (MQ=255)
tCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAg < 2:49162/93‑1 (MQ=255)
cccgcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAgcc < 1:1776859/92‑3 (MQ=255)
ccgcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCa < 2:4428031/93‑1 (MQ=255)
ccgcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCa < 2:1648784/93‑1 (MQ=255)
ccgcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCa < 1:1015770/93‑1 (MQ=255)
cgcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAc < 2:243565/93‑1 (MQ=255)
gcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcg < 2:2870387/93‑1 (MQ=255)
gcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcg > 2:838171/1‑93 (MQ=255)
cACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcgc < 2:2249231/93‑1 (MQ=255)
cACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcgc < 2:6272209/93‑1 (MQ=255)
cACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcgc > 2:4260450/1‑93 (MQ=255)
aCGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcgcg > 2:2693603/1‑93 (MQ=255)
aCGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcgcg > 2:3547083/1‑93 (MQ=255)
gtgtTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGAt > 2:4087932/1‑93 (MQ=255)
tgtTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATg > 1:6137422/1‑93 (MQ=255)
tgtTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATg > 1:5988386/1‑93 (MQ=255)
gtTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCCATGt > 2:5734441/1‑93 (MQ=255)
cACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTc < 1:1105117/93‑1 (MQ=255)
aCCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTcc > 1:1321304/1‑93 (MQ=255)
aCCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTcc > 2:5791338/1‑93 (MQ=255)
ttCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGc < 2:18574/93‑1 (MQ=255)
cAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAg > 2:1073588/1‑93 (MQ=255)
gCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCg > 2:610182/1‑93 (MQ=255)
ggTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGAt < 1:1112456/93‑1 (MQ=255)
ggTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGAt < 1:1289465/93‑1 (MQ=255)
tGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGt < 1:2925950/93‑1 (MQ=255)
tGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGt > 2:3092491/1‑93 (MQ=255)
ggCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGtt < 1:4522820/93‑1 (MQ=255)
tCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGc > 1:2322096/1‑93 (MQ=255)
tCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGc < 1:20391/93‑1 (MQ=255)
cAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGcc > 1:1622350/1‑93 (MQ=255)
aaaGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCa < 1:2879411/93‑1 (MQ=255)
aaaGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCa > 1:634404/1‑93 (MQ=255)
aaaGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCa < 2:4741756/93‑1 (MQ=255)
aGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGa < 1:4289942/93‑1 (MQ=255)
aGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGa < 1:4045678/93‑1 (MQ=255)
gCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGAt < 2:4193177/93‑1 (MQ=255)
gCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGAt < 1:2460201/93‑1 (MQ=255)
gCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGAt < 2:1118864/93‑1 (MQ=255)
gcgcACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGc < 2:2983053/93‑1 (MQ=255)
|
AGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGTACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGC > NC_000913/1533429‑1533608
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGTACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGCAATT > NC_000913/1533427‑1533612
|
CAAGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCA > SRR4302533.765644/1‑94 (MQ=60)
CAAGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCA > SRR4302533.5985550/1‑94 (MQ=60)
CAAGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCA > SRR4302533.5832701/1‑94 (MQ=60)
AAGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCAC > SRR4302533.4322119/1‑94 (MQ=60)
AAGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCAC > SRR4302533.3729404/1‑94 (MQ=60)
AGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACC > SRR4302533.4878104/1‑94 (MQ=60)
AGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACC > SRR4302533.2804718/1‑94 (MQ=60)
AGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACC > SRR4302533.4878105/1‑94 (MQ=60)
AGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACC < SRR4302533.4882179/94‑1 (MQ=60)
GCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCT < SRR4302533.4199589/94‑1 (MQ=60)
CCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTT < SRR4302533.3561871/94‑1 (MQ=60)
CCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTT < SRR4302533.5368438/94‑1 (MQ=60)
CCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTT < SRR4302533.3853459/94‑1 (MQ=60)
CCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTT < SRR4302533.3036855/94‑1 (MQ=60)
CTGGGAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTG < SRR4302533.2862593/94‑1 (MQ=60)
CTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCTTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTG < SRR4302533.2862594/94‑1 (MQ=60)
GGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTT < SRR4302533.1111128/94‑1 (MQ=60)
GGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTT < SRR4302533.1483846/94‑1 (MQ=60)
GGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTT > SRR4302533.5643615/1‑94 (MQ=60)
GGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTT < SRR4302533.682499/94‑1 (MQ=60)
GCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTC > SRR4302533.5359894/1‑94 (MQ=60)
GAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAG > SRR4302533.4795908/1‑94 (MQ=60)
GAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAG < SRR4302533.2693689/94‑1 (MQ=60)
ATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCG < SRR4302533.4182821/94‑1 (MQ=60)
ATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCG < SRR4302533.5772955/94‑1 (MQ=60)
ATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCG > SRR4302533.3553139/1‑94 (MQ=60)
TATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGA < SRR4302533.2109872/94‑1 (MQ=60)
ATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAA < SRR4302533.724702/94‑1 (MQ=60)
ATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAA > SRR4302533.4128815/1‑94 (MQ=60)
CGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAAT < SRR4302533.590314/94‑1 (MQ=60)
GTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATA < SRR4302533.5617269/94‑1 (MQ=60)
GTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATA > SRR4302533.2605599/1‑94 (MQ=60)
TCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATAC > SRR4302533.4649251/1‑94 (MQ=60)
TCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATAC > SRR4302533.2885801/1‑94 (MQ=60)
TCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATAC < SRR4302533.4382363/94‑1 (MQ=60)
CCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACG < SRR4302533.3054393/94‑1 (MQ=60)
CTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGA > SRR4302533.4385434/1‑94 (MQ=60)
AGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAA < SRR4302533.946268/94‑1 (MQ=60)
GTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCATCTTGTTCCAGCGAAATACGATAAT < SRR4302533.4535269/94‑1 (MQ=60)
TGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATC < SRR4302533.1165559/94‑1 (MQ=60)
TGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATC < SRR4302533.4514034/94‑1 (MQ=60)
GAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCA > SRR4302533.5505719/1‑94 (MQ=60)
AGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCAT < SRR4302533.6252289/94‑1 (MQ=60)
AGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCAT > SRR4302533.359460/1‑94 (MQ=60)
AGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCAT < SRR4302533.1603939/94‑1 (MQ=60)
AGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCAT < SRR4302533.4037070/94‑1 (MQ=60)
AGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCAT < SRR4302533.4093245/94‑1 (MQ=60)
AGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCAT > SRR4302533.4411473/1‑94 (MQ=60)
GATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATC > SRR4302533.2234501/1‑94 (MQ=60)
TGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGT > SRR4302533.4479308/1‑94 (MQ=60)
TGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGT > SRR4302533.4202927/1‑94 (MQ=60)
GAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTT < SRR4302533.4005988/94‑1 (MQ=60)
AAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTG < SRR4302533.3201913/94‑1 (MQ=60)
AAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTG < SRR4302533.3630709/94‑1 (MQ=60)
AGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGT > SRR4302533.3459335/1‑94 (MQ=60)
AGCGCGTTGATAATCGCCGCACATGTTTCGCCTGCCAGCGGTGTCTCAAAGCCCGGCCCTCCTTGTTCCAGCGAAATACGATAATCATCGTTGT < SRR4302533.785311/94‑1 (MQ=60)
GCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTG < SRR4302533.2167972/94‑1 (MQ=60)
CGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGT > SRR4302533.1221698/1‑94 (MQ=60)
CGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTT < SRR4302533.3705589/94‑1 (MQ=60)
GTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTT > SRR4302533.2881659/1‑94 (MQ=60)
GTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTT > SRR4302533.367560/1‑94 (MQ=60)
TTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTT < SRR4302533.5288991/94‑1 (MQ=60)
TTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTT > SRR4302533.756505/1‑94 (MQ=60)
TGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTC > SRR4302533.3511586/1‑94 (MQ=60)
TGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTC > SRR4302533.4503730/1‑94 (MQ=60)
TGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTC > SRR4302533.4263305/1‑94 (MQ=60)
GATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCG < SRR4302533.5336438/94‑1 (MQ=60)
TAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGAT > SRR4302533.4060069/1‑94 (MQ=60)
TAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGAT > SRR4302533.5642548/1‑94 (MQ=60)
TAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGAT < SRR4302533.6039693/94‑1 (MQ=60)
AATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATA < SRR4302533.1573855/94‑1 (MQ=60)
AATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATA > SRR4302533.4776458/1‑94 (MQ=60)
AATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATA < SRR4302533.1494276/94‑1 (MQ=60)
AATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATA > SRR4302533.3541840/1‑94 (MQ=60)
ATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAG < SRR4302533.5143037/94‑1 (MQ=60)
GCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCA < SRR4302533.4631437/94‑1 (MQ=60)
CCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGCCA < SRR4302533.1787676/94‑1 (MQ=60)
CCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAC < SRR4302533.1021737/94‑1 (MQ=60)
CGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACG > SRR4302533.1247537/1‑94 (MQ=60)
CGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGACCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACG > SRR4302533.1339016/1‑94 (MQ=60)
CACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCCCCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCG < SRR4302533.4760592/94‑1 (MQ=60)
GTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATG > SRR4302533.6174395/1‑94 (MQ=60)
GTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATG < SRR4302533.2943578/94‑1 (MQ=60)
GTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATG < SRR4302533.258662/94‑1 (MQ=60)
GTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATG > SRR4302533.6024652/1‑94 (MQ=60)
GTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTT < SRR4302533.1211235/94‑1 (MQ=60)
TTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTT > SRR4302533.1112733/1‑94 (MQ=60)
TCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTC < SRR4302533.5325927/94‑1 (MQ=60)
CACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCC < SRR4302533.1111666/94‑1 (MQ=60)
CACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCC > SRR4302533.1329233/1‑94 (MQ=60)
CACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCC < SRR4302533.3723035/94‑1 (MQ=60)
ACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCT > SRR4302533.749798/1‑94 (MQ=60)
ACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCT > SRR4302533.1998600/1‑94 (MQ=60)
TCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCA > SRR4302533.1400672/1‑94 (MQ=60)
TCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCA > SRR4302533.6219152/1‑94 (MQ=60)
TCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCA > SRR4302533.1302781/1‑94 (MQ=60)
CCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAG < SRR4302533.2112919/94‑1 (MQ=60)
CCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAG < SRR4302533.4370101/94‑1 (MQ=60)
CCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAG > SRR4302533.5648010/1‑94 (MQ=60)
GGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATT > SRR4302533.4871095/1‑94 (MQ=60)
GGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATG < SRR4302533.1119056/94‑1 (MQ=60)
GGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATG < SRR4302533.2462469/94‑1 (MQ=60)
GGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATG < SRR4302533.1297227/94‑1 (MQ=60)
GTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGT > SRR4302533.4994210/1‑94 (MQ=60)
TGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTT < SRR4302533.2943853/94‑1 (MQ=60)
GGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTT < SRR4302533.4550200/94‑1 (MQ=60)
GCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTG > SRR4302533.1599814/1‑94 (MQ=60)
CTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGC > SRR4302533.2336468/1‑94 (MQ=60)
CTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGC > SRR4302533.3358186/1‑94 (MQ=60)
TCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCC < SRR4302533.20528/94‑1 (MQ=60)
TCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCC > SRR4302533.1632181/1‑94 (MQ=60)
CAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCA > SRR4302533.2943389/1‑94 (MQ=60)
CAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCA < SRR4302533.3005262/94‑1 (MQ=60)
CAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCA > SRR4302533.638136/1‑94 (MQ=60)
AAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAG < SRR4302533.2897128/94‑1 (MQ=60)
AGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGAT < SRR4302533.4315740/94‑1 (MQ=60)
AGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGAT < SRR4302533.4070299/94‑1 (MQ=60)
GCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATC < SRR4302533.2475384/94‑1 (MQ=60)
CCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCG > SRR4302533.5618313/1‑94 (MQ=60)
CCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCG < SRR4302533.1758817/94‑1 (MQ=60)
CCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGT > SRR4302533.5499021/1‑94 (MQ=60)
GGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGC > SRR4302533.2414156/1‑94 (MQ=60)
GCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGCA > SRR4302533.260669/1‑94 (MQ=60)
CGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGCAA > SRR4302533.322798/1‑94 (MQ=60)
CGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGCAA < SRR4302533.3344421/94‑1 (MQ=60)
CGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGCAA > SRR4302533.5844563/1‑94 (MQ=60)
GCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGCAAT > SRR4302533.4710153/1‑94 (MQ=60)
CACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGCAATT > SRR4302533.6127300/1‑94 (MQ=60)
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CAAGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGTACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGCAATT > NC_000913/1533427‑1533612
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
