Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,584,418 |
T→C |
I31M (ATA→ATG) |
b1501 ← |
putative oxidoreductase major subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,584,418 | 0 | T | C | 100.0%
| 629.9
/ NA
| 193 | I31M (ATA→ATG) | b1501 | putative oxidoreductase major subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (91/102); total (91/102) |
Only 100 of 202 total aligned reads displayed.
CGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCTT > NC_000913/1584328‑1584507
|
cGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGcat > 2:1190184/1‑93 (MQ=255)
gCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGcata < 2:2399718/93‑1 (MQ=255)
gCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGcata > 1:5318230/1‑93 (MQ=255)
cACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCatat > 2:2093057/1‑93 (MQ=255)
aCTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATc < 1:5193287/93‑1 (MQ=255)
aCTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCACGTCAAACATGGCAATAACATCCTGGCGCATATc < 2:3751092/93‑1 (MQ=255)
cTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATcc > 2:903178/1‑93 (MQ=255)
cTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATcc > 1:6057255/1‑93 (MQ=255)
tgtgCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCa < 1:348242/93‑1 (MQ=255)
gtgCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCAt < 2:4813424/93‑1 (MQ=255)
tgCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATc > 2:190664/1‑93 (MQ=255)
tgCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATc > 2:5034900/1‑93 (MQ=255)
tgCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATc < 2:717421/93‑1 (MQ=255)
cTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTg < 2:3941490/93‑1 (MQ=255)
cTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTg > 1:3754511/1‑93 (MQ=255)
ttAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGc > 1:3666615/1‑93 (MQ=255)
ttAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGc > 2:4559803/1‑93 (MQ=255)
tAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCt > 1:2766109/1‑93 (MQ=255)
tAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCt < 2:726742/93‑1 (MQ=255)
aTCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACg < 1:3327555/93‑1 (MQ=255)
cTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACATa < 1:2066885/93‑1 (MQ=255)
tGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTAc < 1:3420151/93‑1 (MQ=255)
tGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTAc < 2:5803860/93‑1 (MQ=255)
tGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTAc < 1:5688098/93‑1 (MQ=255)
tGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTAc < 2:4437680/93‑1 (MQ=255)
gCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTg > 1:4241329/1‑93 (MQ=255)
gCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTg > 2:4087752/1‑93 (MQ=255)
ccATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGc < 1:5760316/93‑1 (MQ=255)
aTGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCAt < 2:5605123/93‑1 (MQ=255)
tGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCAtt < 2:2739118/93‑1 (MQ=255)
agCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCAtt < 1:5030076/92‑1 (MQ=255)
tcacaACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTc < 1:2931273/92‑1 (MQ=255)
gCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTc < 1:221255/93‑1 (MQ=255)
acaACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCAATCTGCTTACGTACTGCATTCGc > 1:1887844/1‑93 (MQ=255)
caACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCt < 2:3549255/93‑1 (MQ=255)
aCCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTAc < 1:5778255/93‑1 (MQ=255)
ccGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACgg > 2:2321608/1‑93 (MQ=255)
cGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACTTGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGa > 1:2224482/1‑93 (MQ=255)
cGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGa > 1:2301716/1‑93 (MQ=255)
ggACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGAt > 2:6147073/1‑93 (MQ=255)
aGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTaa < 1:2691263/93‑1 (MQ=255)
gTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAAc > 2:6282835/1‑93 (MQ=255)
gTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAAc > 2:2927675/1‑93 (MQ=255)
gTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAAc > 1:3784152/1‑93 (MQ=255)
tCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACa > 2:5245842/1‑93 (MQ=255)
tCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACa < 2:1605118/93‑1 (MQ=255)
cAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAg > 2:1769547/1‑93 (MQ=255)
aaaGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGc < 1:4944368/93‑1 (MQ=255)
aaGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCa > 2:1393678/1‑93 (MQ=255)
aaGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCa > 1:4160985/1‑93 (MQ=255)
aGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCAc > 2:3202908/1‑93 (MQ=255)
gCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCAcc > 2:3594798/1‑93 (MQ=255)
cccTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCAccc > 2:327834/1‑93 (MQ=255)
cccTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCAccc < 1:5480836/93‑1 (MQ=255)
ccTCTGTCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCAcccc < 2:802411/93‑1 (MQ=255)
ccTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCAcccc > 2:2193347/1‑93 (MQ=255)
ctctGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCa > 1:640339/1‑93 (MQ=255)
tctGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCaa < 1:4674366/93‑1 (MQ=255)
ctGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAac > 1:2490648/1‑93 (MQ=255)
ggCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAacca > 1:1775239/1‑93 (MQ=255)
ggCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAacca > 2:5125090/1‑93 (MQ=255)
gCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAaccac > 2:1511119/1‑93 (MQ=255)
cTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAaccacc > 1:5732655/1‑93 (MQ=255)
cTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTGACGTACTGCATTCGCTACGGATTTAACAGCACCCCAaccacc < 1:4429467/93‑1 (MQ=255)
ttATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCt < 1:1758974/93‑1 (MQ=255)
ttATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCt < 2:59015/93‑1 (MQ=255)
ttATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCt < 1:938144/93‑1 (MQ=255)
aTTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATATGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTgc < 1:1470561/93‑1 (MQ=255)
ttCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTgca > 1:3522639/1‑93 (MQ=255)
cATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTgcagc > 2:4639815/1‑93 (MQ=255)
cATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTgcagc > 2:395456/1‑93 (MQ=255)
aTGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTgcagca < 2:4608383/93‑1 (MQ=255)
aTGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTgcagca > 2:3762263/1‑93 (MQ=255)
aTGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTgcagca > 2:2280345/1‑93 (MQ=255)
tGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCAc < 1:946296/93‑1 (MQ=255)
cAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCt < 1:4804886/93‑1 (MQ=255)
cAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCt < 1:3057808/93‑1 (MQ=255)
aaCATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTgg > 2:4370181/1‑93 (MQ=255)
aaCATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTgg < 2:3430684/93‑1 (MQ=255)
aaCATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTgg < 1:5617042/93‑1 (MQ=255)
aaCATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTgg < 1:1262135/93‑1 (MQ=255)
aCATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTgct < 2:5009338/93‑3 (MQ=255)
aCATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGt < 1:4394468/93‑1 (MQ=255)
aTGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAg > 1:3978138/1‑93 (MQ=255)
tGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAgg > 2:4270591/1‑93 (MQ=255)
ggCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGa < 2:2545508/93‑1 (MQ=255)
aTAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCa > 1:5870989/1‑93 (MQ=255)
tAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCaa < 1:137782/93‑1 (MQ=255)
tAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCaa > 1:1084694/1‑93 (MQ=255)
aaCATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAt > 2:3872342/1‑93 (MQ=255)
aCATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAtt > 1:6278919/1‑93 (MQ=255)
aTCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAtttt < 2:4125690/93‑1 (MQ=255)
tCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAttttt > 1:2532942/1‑93 (MQ=255)
tCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAttttt < 2:6232635/93‑1 (MQ=255)
cTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAttttttt > 2:5690146/1‑93 (MQ=255)
tGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTttc < 2:5077399/93‑1 (MQ=255)
ggCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTttct > 1:3552715/1‑93 (MQ=255)
ggCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTttct > 1:4842311/1‑93 (MQ=255)
gcgcATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTttctt < 2:5512953/93‑1 (MQ=255)
gcgcATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTttctt < 2:6045110/93‑1 (MQ=255)
|
CGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCTT > NC_000913/1584328‑1584507
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCTTCAT > NC_000913/1584328‑1584510
|
CGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATA > SRR4302533.5350101/1‑94 (MQ=60)
ACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCC > SRR4302533.6093931/1‑94 (MQ=60)
ACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCC < SRR4302533.5224612/94‑1 (MQ=60)
CTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCT > SRR4302533.5047386/1‑94 (MQ=60)
TGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCAT < SRR4302533.350368/94‑1 (MQ=60)
TGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCT > SRR4302533.2235330/1‑94 (MQ=60)
TGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCT > SRR4302533.6015454/1‑94 (MQ=60)
GCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTG > SRR4302533.3777523/1‑94 (MQ=60)
CTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGC > SRR4302533.3689153/1‑94 (MQ=60)
TTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCT > SRR4302533.2783067/1‑94 (MQ=60)
TAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTT > SRR4302533.2753048/1‑94 (MQ=60)
GGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTAC < SRR4302533.6317984/94‑1 (MQ=60)
GGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTAC < SRR4302533.558121/94‑1 (MQ=60)
GATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACG < SRR4302533.3955881/94‑1 (MQ=60)
ATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGT < SRR4302533.3348118/94‑1 (MQ=60)
CTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTAC > SRR4302533.2906426/1‑94 (MQ=60)
CTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACATAC < SRR4302533.2079620/94‑1 (MQ=60)
TGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACT < SRR4302533.3441283/94‑1 (MQ=60)
TGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACT < SRR4302533.1333340/94‑1 (MQ=60)
TGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACT < SRR4302533.5722455/94‑1 (MQ=60)
GGCCATGCACATCCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTG < SRR4302533.3552834/94‑1 (MQ=60)
GGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTG > SRR4302533.4266941/1‑94 (MQ=60)
GGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTG < SRR4302533.3471141/94‑1 (MQ=60)
CCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCA < SRR4302533.5795074/94‑1 (MQ=60)
AGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTC < SRR4302533.5060530/94‑1 (MQ=60)
TCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCG < SRR4302533.2949201/94‑1 (MQ=60)
GCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCG < SRR4302533.222641/94‑1 (MQ=60)
GCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCG < SRR4302533.3351105/94‑1 (MQ=60)
CACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCAATCTGCTTACGTACTGCATTCGC > SRR4302533.1899374/1‑94 (MQ=60)
CAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTA < SRR4302533.2044154/94‑1 (MQ=60)
CACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTAC < SRR4302533.5784574/94‑1 (MQ=60)
ACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACG < SRR4302533.5813156/94‑1 (MQ=60)
CCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACTTGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGA > SRR4302533.2238218/1‑94 (MQ=60)
CCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGA > SRR4302533.2315979/1‑94 (MQ=60)
CCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGA < SRR4302533.4454237/94‑1 (MQ=60)
CGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGAT < SRR4302533.1779709/94‑1 (MQ=60)
GACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTT < SRR4302533.5798153/94‑1 (MQ=60)
GACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTT < SRR4302533.3704058/94‑1 (MQ=60)
AGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAAC < SRR4302533.4796758/94‑1 (MQ=60)
AGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAAC > SRR4302533.3807323/1‑94 (MQ=60)
AGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAAC < SRR4302533.2707759/94‑1 (MQ=60)
TCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAG < SRR4302533.211053/94‑1 (MQ=60)
AAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCA < SRR4302533.4974296/94‑1 (MQ=60)
AAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCA > SRR4302533.4186202/1‑94 (MQ=60)
AAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCAC > SRR4302533.353598/1‑94 (MQ=60)
AAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCAC < SRR4302533.1150587/94‑1 (MQ=60)
AGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACC < SRR4302533.4847041/94‑1 (MQ=60)
GCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCC < SRR4302533.227407/94‑1 (MQ=60)
CCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCC < SRR4302533.5513879/94‑1 (MQ=60)
CCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCA < SRR4302533.627059/94‑1 (MQ=60)
CCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCA > SRR4302533.644106/1‑94 (MQ=60)
TCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAAC > SRR4302533.2505989/1‑94 (MQ=60)
TCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAAC < SRR4302533.4702688/94‑1 (MQ=60)
TGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCA > SRR4302533.1786050/1‑94 (MQ=60)
TGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCA > SRR4302533.796717/1‑94 (MQ=60)
GGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCAC > SRR4302533.5505895/1‑94 (MQ=60)
GGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCAC > SRR4302533.5748181/1‑94 (MQ=60)
GCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACC > SRR4302533.5767264/1‑94 (MQ=60)
CTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTGACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCT < SRR4302533.4456245/94‑1 (MQ=60)
TTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTG < SRR4302533.1769696/94‑1 (MQ=60)
TTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTG < SRR4302533.943655/94‑1 (MQ=60)
ATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCA > SRR4302533.3544352/1‑94 (MQ=60)
ATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATATGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCA < SRR4302533.1479435/94‑1 (MQ=60)
TTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAG < SRR4302533.3785410/94‑1 (MQ=60)
TTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAG > SRR4302533.2980542/1‑94 (MQ=60)
TGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACC < SRR4302533.951860/94‑1 (MQ=60)
TGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACC < SRR4302533.421323/94‑1 (MQ=60)
GTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCC > SRR4302533.1523225/1‑94 (MQ=60)
TCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCT < SRR4302533.4965848/94‑1 (MQ=60)
TCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCT < SRR4302533.1415818/94‑1 (MQ=60)
CAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTG < SRR4302533.4833983/94‑1 (MQ=60)
CAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTG < SRR4302533.3076569/94‑1 (MQ=60)
AAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGG > SRR4302533.5878657/1‑94 (MQ=60)
AACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGT < SRR4302533.1269683/94‑1 (MQ=60)
AACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGT < SRR4302533.5650997/94‑1 (MQ=60)
ACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTA < SRR4302533.4421000/94‑1 (MQ=60)
CATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAG > SRR4302533.4002358/1‑94 (MQ=60)
ATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTTCTGCATTCGCTACGGATTTAACAGCACCCCAACCGCCTGCAGCACCCTGGTAGG < SRR4302533.4298792/94‑1 (MQ=60)
ATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGG < SRR4302533.2529168/94‑1 (MQ=60)
ATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGG < SRR4302533.184070/94‑1 (MQ=60)
GGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGAT < SRR4302533.949002/94‑1 (MQ=60)
AATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCA > SRR4302533.3643590/1‑94 (MQ=60)
AATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCA < SRR4302533.5659438/94‑1 (MQ=60)
AATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCA > SRR4302533.5166899/1‑94 (MQ=60)
AATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCA > SRR4302533.5906474/1‑94 (MQ=60)
ATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAA > SRR4302533.1091091/1‑94 (MQ=60)
TAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAT > SRR4302533.3274707/1‑94 (MQ=60)
TAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAT < SRR4302533.138656/94‑1 (MQ=60)
TAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAT < SRR4302533.5343786/94‑1 (MQ=60)
AACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATT < SRR4302533.4567086/94‑1 (MQ=60)
AACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATT > SRR4302533.6316404/1‑94 (MQ=60)
ACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTT < SRR4302533.2478684/94‑1 (MQ=60)
ATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTT > SRR4302533.2548533/1‑94 (MQ=60)
ATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTT > SRR4302533.2626542/1‑94 (MQ=60)
CCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTT > SRR4302533.4034170/1‑94 (MQ=60)
TGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCT > SRR4302533.3574598/1‑94 (MQ=60)
TGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCT > SRR4302533.4871658/1‑94 (MQ=60)
GCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCTTCAT < SRR4302533.2626173/94‑1 (MQ=60)
GCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACACCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCTTCAT < SRR4302533.31556/94‑1 (MQ=60)
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CGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCTTCAT > NC_000913/1584328‑1584510
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
