Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,664,091 |
T→C |
S271S (AGT→AGC) |
b1592 → |
putative chloride channel |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,664,091 | 0 | T | C | 100.0%
| 566.5
/ NA
| 174 | S271S (AGT→AGC) | b1592 | putative chloride channel |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (89/85); total (89/85) |
Only 100 of 179 total aligned reads displayed.
TGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGTCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGG > NC_000913/1664001‑1664180
|
tGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGcct > 2:113080/1‑93 (MQ=255)
tGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGcct < 1:3793160/93‑1 (MQ=255)
gctcTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGcctc < 2:4863227/90‑1 (MQ=255)
tGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAAc < 1:4630069/93‑1 (MQ=255)
gATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACt < 2:3197101/93‑1 (MQ=255)
aTTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACtt < 2:1693403/93‑1 (MQ=255)
aTTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACtt > 2:1457735/1‑93 (MQ=255)
ttATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTg < 2:1861873/93‑1 (MQ=255)
tATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTgc > 1:5652126/1‑93 (MQ=255)
tCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTgcgc > 1:4640932/1‑93 (MQ=255)
cAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGcgcc > 2:499077/1‑93 (MQ=255)
aCAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGccc < 2:5932400/93‑1 (MQ=255)
aCAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGccc < 2:2119695/93‑1 (MQ=255)
cAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCt < 1:1812555/93‑1 (MQ=255)
aGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTg > 2:4298204/1‑93 (MQ=255)
ggTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTgg > 1:4524149/1‑93 (MQ=255)
gtgtGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGc < 1:4549511/93‑1 (MQ=255)
tgtgCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCa > 1:641953/1‑93 (MQ=255)
gtgCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCaa > 2:3636760/1‑93 (MQ=255)
gtgCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCaa > 2:6270059/1‑93 (MQ=255)
gCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACt < 1:747111/93‑1 (MQ=255)
cTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTg < 2:3237429/93‑1 (MQ=255)
cTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTg > 1:3727639/1‑93 (MQ=255)
tGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTgg > 2:2617690/1‑93 (MQ=255)
tGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTgg > 1:970454/1‑93 (MQ=255)
tGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTgg < 2:2382737/93‑1 (MQ=255)
ggCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGc < 1:2841091/93‑1 (MQ=255)
ggCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGc > 1:2571569/1‑93 (MQ=255)
ggCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGc < 2:4735438/93‑1 (MQ=255)
gCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGcc > 1:3641068/1‑92 (MQ=255)
gCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCa > 1:5457551/1‑93 (MQ=255)
ggTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTa < 1:1010624/93‑1 (MQ=255)
ggTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTa < 2:1126674/93‑1 (MQ=255)
ggTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTa > 1:6097044/1‑93 (MQ=255)
gTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAg < 1:4803435/93‑1 (MQ=255)
gTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAg < 2:1074278/93‑1 (MQ=255)
tCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAgg > 1:4935545/1‑93 (MQ=255)
tCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAgg > 1:3319296/1‑93 (MQ=255)
tCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAgg < 1:2193141/93‑1 (MQ=255)
gCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGt < 1:3933524/93‑1 (MQ=255)
gCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGt < 1:2038545/93‑1 (MQ=255)
gACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGa > 2:2214448/1‑93 (MQ=255)
gACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGa > 2:863738/1‑93 (MQ=255)
gACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGa < 1:4354073/93‑1 (MQ=255)
aCCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGAt < 2:3335110/93‑1 (MQ=255)
aCCACTGTTGTTAACGTTAATGAACGCCCGTCATCGTGGATTTATGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCCGGTCGAt > 2:2554478/1‑93 (MQ=255)
cTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATtgtg < 1:4075672/93‑1 (MQ=255)
tgttgtTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTgg > 2:3040851/1‑93 (MQ=255)
tgttgtTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTgg > 2:4912148/1‑93 (MQ=255)
gttgttAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTggg > 2:3507963/1‑93 (MQ=255)
gttgttAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTggg > 1:6022518/1‑93 (MQ=255)
ttgttAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGGTGATCGTgggg > 2:6172471/1‑92 (MQ=255)
tgttAACGTTAATGAACGCGTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTc < 2:2167370/93‑1 (MQ=255)
tgttAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTc < 1:6287002/93‑1 (MQ=255)
tgttAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTc < 1:4318838/93‑1 (MQ=255)
tAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGc > 2:5359586/1‑93 (MQ=255)
taCGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCt < 1:574848/92‑1 (MQ=255)
aaCGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCt > 1:2379942/1‑93 (MQ=255)
aCGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCtt > 1:1657084/1‑93 (MQ=255)
aCGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCtt > 2:3291071/1‑93 (MQ=255)
aCGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCtt > 1:5198558/1‑93 (MQ=255)
ttAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTcc < 2:5751089/93‑1 (MQ=255)
ttAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTcc > 1:5854586/1‑93 (MQ=255)
tAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTccc < 2:1831681/93‑1 (MQ=255)
tAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTccc > 2:2514229/1‑93 (MQ=255)
aaTGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGACTGCTTTCACt > 2:3808180/1‑93 (MQ=255)
gAACGCGTGTCAGCGTGGATGTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGtt < 1:3182703/93‑1 (MQ=255)
gAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGtt > 2:5571124/1‑93 (MQ=255)
aaCGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTc > 1:3358586/1‑93 (MQ=255)
aaCGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTc > 1:2088703/1‑93 (MQ=255)
aCGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTca > 2:5972121/1‑93 (MQ=255)
aCGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTca < 1:2936148/93‑1 (MQ=255)
cGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTcac < 1:5245573/93‑1 (MQ=255)
ccTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCacac > 1:4498359/1‑93 (MQ=255)
cTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACAcc > 2:2520233/1‑93 (MQ=255)
cTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACAcc > 1:6204483/1‑93 (MQ=255)
cTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTNCNCAcc > 1:5359167/1‑93 (MQ=255)
tGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCt < 2:522996/93‑1 (MQ=255)
tGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCt > 1:6018795/1‑93 (MQ=255)
gTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTg > 1:263785/1‑93 (MQ=255)
cATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCa > 1:3251392/1‑93 (MQ=255)
aTCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAg > 2:4459482/1‑93 (MQ=255)
aTCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAg < 2:1962852/93‑1 (MQ=255)
tCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgt > 2:4139151/1‑93 (MQ=255)
tCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgt > 2:660052/1‑93 (MQ=255)
tCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgt > 1:4699489/1‑93 (MQ=255)
tCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgt > 2:1261456/1‑93 (MQ=255)
tCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgt < 1:6102281/93‑1 (MQ=255)
gTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgtgt < 1:1115134/93‑1 (MQ=255)
ctGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgtgt < 2:2731374/92‑1 (MQ=255)
tGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGtgtg < 1:4959743/93‑1 (MQ=255)
gATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTggg < 2:6085338/93‑1 (MQ=255)
tttGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTTCAGTGTGGGGc > 1:1492270/1‑93 (MQ=255)
tttGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGc > 2:455123/1‑93 (MQ=255)
tttGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGc < 2:5654082/93‑1 (MQ=255)
tttGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGc > 1:1291159/1‑93 (MQ=255)
ttGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCa > 2:320927/1‑93 (MQ=255)
gtgAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAAc < 2:5101620/93‑1 (MQ=255)
tgAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACg < 1:4674404/93‑1 (MQ=255)
gAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACgg > 2:4515162/1‑93 (MQ=255)
|
TGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGTCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGG > NC_000913/1664001‑1664180
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TATGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGTCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGGCTA > NC_000913/1663999‑1664183
|
TATGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCC < SRR4302533.1443443/94‑1 (MQ=60)
ATGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCT < SRR4302533.5072522/94‑1 (MQ=60)
ATGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCT > SRR4302533.2197388/1‑94 (MQ=60)
ATGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCT < SRR4302533.3149212/94‑1 (MQ=60)
TGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTC < SRR4302533.3816376/94‑1 (MQ=60)
TGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACT < SRR4302533.4658133/94‑1 (MQ=60)
TTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGC > SRR4302533.5686289/1‑94 (MQ=60)
ATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGC > SRR4302533.4669050/1‑94 (MQ=60)
TCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCC > SRR4302533.372528/1‑94 (MQ=60)
GTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCC > SRR4302533.2051287/1‑94 (MQ=60)
ACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCT < SRR4302533.6204948/94‑1 (MQ=60)
CAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTG > SRR4302533.5063914/1‑94 (MQ=60)
CAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTG < SRR4302533.1823625/94‑1 (MQ=60)
AGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGG > SRR4302533.4551537/1‑94 (MQ=60)
AGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGG < SRR4302533.344337/94‑1 (MQ=60)
AGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGG > SRR4302533.4699479/1‑94 (MQ=60)
AGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGG < SRR4302533.2907888/94‑1 (MQ=60)
GTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCA < SRR4302533.4577098/94‑1 (MQ=60)
GTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCA > SRR4302533.645727/1‑94 (MQ=60)
TGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACT < SRR4302533.527351/94‑1 (MQ=60)
GCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTG > SRR4302533.3750504/1‑94 (MQ=60)
GCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTG < SRR4302533.2633995/94‑1 (MQ=60)
GCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTG < SRR4302533.751511/94‑1 (MQ=60)
CTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGG > SRR4302533.976147/1‑94 (MQ=60)
TGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGC > SRR4302533.2587394/1‑94 (MQ=60)
GGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCC > SRR4302533.3663460/1‑94 (MQ=60)
GGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCA < SRR4302533.2858576/94‑1 (MQ=60)
GGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCA > SRR4302533.5490432/1‑94 (MQ=60)
GCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCAC < SRR4302533.6029772/94‑1 (MQ=60)
AGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTA > SRR4302533.6133869/1‑94 (MQ=60)
GGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAG < SRR4302533.1016536/94‑1 (MQ=60)
GTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGG > SRR4302533.4965432/1‑94 (MQ=60)
GTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGG > SRR4302533.3339800/1‑94 (MQ=60)
GTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGG < SRR4302533.4832526/94‑1 (MQ=60)
TCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGC < SRR4302533.2206654/94‑1 (MQ=60)
CTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCG < SRR4302533.3175317/94‑1 (MQ=60)
CTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCG > SRR4302533.5356522/1‑94 (MQ=60)
GCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTT < SRR4302533.2051118/94‑1 (MQ=60)
GCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTT < SRR4302533.3957534/94‑1 (MQ=60)
CGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTG < SRR4302533.4213018/94‑1 (MQ=60)
GGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGA < SRR4302533.1322773/94‑1 (MQ=60)
GACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGAT < SRR4302533.4895475/94‑1 (MQ=60)
GACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGAT < SRR4302533.4380353/94‑1 (MQ=60)
CCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCG < SRR4302533.238166/94‑1 (MQ=60)
CTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATTGTGG < SRR4302533.4100482/94‑1 (MQ=60)
TGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGG > SRR4302533.6059016/1‑94 (MQ=60)
GTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGT < SRR4302533.1210633/94‑1 (MQ=60)
TTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTC > SRR4302533.5488045/1‑94 (MQ=60)
TGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCT < SRR4302533.4344851/94‑1 (MQ=60)
TGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCT < SRR4302533.6324510/94‑1 (MQ=60)
TGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCT < SRR4302533.3893197/94‑1 (MQ=60)
TAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCT > SRR4302533.2394664/1‑94 (MQ=60)
TAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCT < SRR4302533.6257176/94‑1 (MQ=60)
tactTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTT < SRR4302533.676217/90‑1 (MQ=60)
TACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTT < SRR4302533.578240/94‑1 (MQ=60)
AACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTT > SRR4302533.1667111/1‑94 (MQ=60)
AACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTT > SRR4302533.5229905/1‑94 (MQ=60)
ACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTT > SRR4302533.1825504/1‑94 (MQ=60)
CGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTC > SRR4302533.1664985/1‑94 (MQ=60)
GTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCC > SRR4302533.5889983/1‑94 (MQ=60)
TTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCC < SRR4302533.948811/94‑1 (MQ=60)
TTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCC > SRR4302533.5775640/1‑94 (MQ=60)
TAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCT < SRR4302533.46275/94‑1 (MQ=60)
TGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTT > SRR4302533.3346036/1‑94 (MQ=60)
GAACGCGTGTCAGCGTGGATGTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTC < SRR4302533.3202284/94‑1 (MQ=60)
GAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTC > SRR4302533.3379339/1‑94 (MQ=60)
GAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTC > SRR4302533.2101563/1‑94 (MQ=60)
ACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCAC < SRR4302533.2954098/94‑1 (MQ=60)
CGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACA < SRR4302533.5277118/94‑1 (MQ=60)
GCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACAC < SRR4302533.4760326/94‑1 (MQ=60)
GCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACAC > SRR4302533.4525601/1‑94 (MQ=60)
CCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACC > SRR4302533.6241692/1‑94 (MQ=60)
CCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTNCNCACC > SRR4302533.5391343/1‑94 (MQ=60)
CTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCT < SRR4302533.2827208/94‑1 (MQ=60)
CTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCT > SRR4302533.6055268/1‑94 (MQ=60)
TGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTG > SRR4302533.265385/1‑94 (MQ=60)
TCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCA > SRR4302533.3271440/1‑94 (MQ=60)
CATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAG > SRR4302533.5103906/1‑94 (MQ=60)
CATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAG < SRR4302533.613369/94‑1 (MQ=60)
ATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGT > SRR4302533.4727980/1‑94 (MQ=60)
ATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGT > SRR4302533.4727979/1‑94 (MQ=60)
TCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTG < SRR4302533.6139121/94‑1 (MQ=60)
CGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGT > SRR4302533.3282175/1‑94 (MQ=60)
CGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGT < SRR4302533.4382767/94‑1 (MQ=60)
CGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGT < SRR4302533.6101879/94‑1 (MQ=60)
GTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTG < SRR4302533.1121747/94‑1 (MQ=60)
TGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGG < SRR4302533.4989790/94‑1 (MQ=60)
ATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTTCAGTGTGGGGC > SRR4302533.1501269/1‑94 (MQ=60)
ATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGC > SRR4302533.5790149/1‑94 (MQ=60)
ATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGC > SRR4302533.1298939/1‑94 (MQ=60)
TGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAAC > SRR4302533.456062/1‑94 (MQ=60)
GTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACG < SRR4302533.4099021/94‑1 (MQ=60)
TGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGG < SRR4302533.4702726/94‑1 (MQ=60)
TGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGG < SRR4302533.4547278/94‑1 (MQ=60)
AGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGGCT > SRR4302533.6146867/1‑94 (MQ=60)
AGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGGCT < SRR4302533.1477236/94‑1 (MQ=60)
GCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGGCTA > SRR4302533.6231680/1‑94 (MQ=60)
GCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGGCTA > SRR4302533.4599401/1‑94 (MQ=60)
GCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGGCTA > SRR4302533.3304180/1‑94 (MQ=60)
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TATGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGTCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGGCTA > NC_000913/1663999‑1664183
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
