Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,689,553 |
A→G |
intergenic (+169/+57) |
ydgA → / ← uidC |
hypothetical protein/membrane‑associated protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,689,553 | 0 | A | G | 100.0%
| 513.6
/ NA
| 163 | intergenic (+169/+57) | ydgA/uidC | hypothetical protein/membrane‑associated protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (86/77); total (86/77) |
Only 100 of 171 total aligned reads displayed.
GCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCA > NC_000913/1689463‑1689641
|
gCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGcg < 2:2339160/93‑1 (MQ=255)
gCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGcg > 2:2879707/1‑93 (MQ=255)
cTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAgcgc > 1:2588694/1‑93 (MQ=255)
cTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAgcgc > 2:2797556/1‑93 (MQ=255)
ttATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGcgcg < 1:2983629/93‑1 (MQ=255)
ttATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGcgcg < 1:3258677/93‑1 (MQ=255)
tCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCAc > 2:1653406/1‑93 (MQ=255)
tCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCAc < 1:2801312/93‑1 (MQ=255)
cAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACt < 1:3996629/93‑1 (MQ=255)
cAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACt < 2:1708799/93‑1 (MQ=255)
aGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACtt < 1:2083093/93‑1 (MQ=255)
ggCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACttt < 2:5422408/93‑1 (MQ=255)
ccTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGt > 1:5237139/1‑93 (MQ=255)
ccTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGt > 2:5302191/1‑93 (MQ=255)
tACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTca > 2:3856904/1‑93 (MQ=255)
aCCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaa < 2:3279240/93‑1 (MQ=255)
aCCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaa > 2:757725/1‑93 (MQ=255)
ccTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaac > 1:5363500/1‑93 (MQ=255)
ttttCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaacaa < 1:1046297/93‑1 (MQ=255)
ttttCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaacaa > 2:4532782/1‑93 (MQ=255)
tCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCt < 2:4254154/93‑1 (MQ=255)
cTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCACCAATCTGa < 2:6130970/93‑1 (MQ=255)
cTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGa > 1:4295813/1‑93 (MQ=255)
tGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCTTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGaa < 1:5550302/93‑1 (MQ=255)
gCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGaaa < 2:2513662/93‑1 (MQ=255)
gCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGaaa > 2:6068590/1‑93 (MQ=255)
cAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAAc < 2:3454105/93‑1 (MQ=255)
cAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAAc < 2:2635816/93‑1 (MQ=255)
aaCACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACg < 1:1908681/93‑1 (MQ=255)
aaCACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACg > 1:1950210/1‑93 (MQ=255)
acacTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGc > 1:5860003/1‑93 (MQ=255)
acacTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGc < 1:2516278/93‑1 (MQ=255)
acacTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGc < 1:6219028/93‑1 (MQ=255)
cacTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGcc < 1:6119530/93‑1 (MQ=255)
cTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCgg > 1:3788226/1‑93 (MQ=255)
cTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCgg > 2:458939/1‑93 (MQ=255)
cTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCgg > 1:5857646/1‑93 (MQ=255)
tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGGATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga > 1:4086108/1‑93 (MQ=255)
tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga < 1:4622741/93‑1 (MQ=255)
tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga < 2:2358054/93‑1 (MQ=255)
tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga < 1:1159891/93‑1 (MQ=255)
tGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGgaga > 1:2533359/1‑93 (MQ=255)
aaTTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGAtt < 2:2712989/93‑1 (MQ=255)
tttATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGAtttt > 2:1495955/1‑93 (MQ=255)
tttATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGAACTTTGTCACCAATTTGAAACGCGGGGGAtttt > 1:4120910/1‑93 (MQ=18)
tATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtc < 1:1038649/93‑1 (MQ=255)
aTGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtct > 1:5235754/1‑93 (MQ=255)
tGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtctc > 1:6273137/1‑93 (MQ=255)
tGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtctc < 2:2089366/93‑1 (MQ=255)
agtttttttTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCCACAATCTGAAACGCCGGAGATTTTtctct > 2:6178522/4‑93 (MQ=21)
aGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtctctc < 2:5228104/93‑1 (MQ=255)
aGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtctctc < 2:78753/93‑1 (MQ=255)
tttttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCg < 2:1529016/93‑1 (MQ=255)
tttttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCg < 2:3500135/93‑1 (MQ=255)
tttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGGTTTTTCTCTCCGGc < 2:3166335/93‑1 (MQ=255)
tttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGc < 2:2758562/93‑1 (MQ=255)
ttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCg > 1:1963388/1‑93 (MQ=255)
aGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGCAACGCCGGAGATTTTTCTCTCCGGCGTTAt > 1:2334404/1‑93 (MQ=255)
aGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAt < 1:5626237/93‑1 (MQ=255)
ggCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtt < 2:1039395/93‑1 (MQ=255)
ggCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtt < 2:2779175/93‑1 (MQ=255)
ggCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtt > 2:3893776/1‑93 (MQ=255)
cTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtttt > 2:1909720/1‑93 (MQ=255)
tGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAttttt > 1:1897762/1‑93 (MQ=255)
tGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAttttt > 2:5613865/1‑93 (MQ=255)
ggATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtttttt > 1:1970181/1‑93 (MQ=255)
gATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTa < 1:5967428/93‑1 (MQ=255)
aTAAGGCGTTTACGCAGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTAc < 1:3621466/93‑1 (MQ=255)
tAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACt > 1:2888507/1‑93 (MQ=255)
tAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACt > 2:2067233/1‑93 (MQ=255)
aGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTc > 2:4746535/1‑93 (MQ=255)
aGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTc > 1:4721899/1‑93 (MQ=255)
ggCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCa < 2:3992923/93‑1 (MQ=255)
ggCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCa < 1:1479933/93‑1 (MQ=255)
cGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGc < 2:1968023/93‑1 (MQ=255)
cGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGc < 2:4268103/93‑1 (MQ=255)
gTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCa < 1:2006557/93‑1 (MQ=255)
tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt > 2:5720722/1‑93 (MQ=255)
tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt > 2:212600/1‑93 (MQ=255)
tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt > 2:4876550/1‑93 (MQ=255)
tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt > 2:2193507/1‑93 (MQ=255)
tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt > 1:1775616/1‑93 (MQ=255)
tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACACCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt > 2:3176038/1‑93 (MQ=255)
gccgcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGt < 2:3795418/93‑1 (MQ=255)
cgcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCa < 1:2090934/93‑1 (MQ=255)
cgcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCa < 1:4789689/93‑1 (MQ=255)
gcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCAt > 2:2328040/1‑93 (MQ=255)
cATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATa > 1:4983714/1‑93 (MQ=255)
tCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACt > 2:3674235/1‑93 (MQ=255)
cGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGa < 1:795350/93‑1 (MQ=255)
ggCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGaa < 1:1687037/93‑1 (MQ=255)
ggCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGaa > 2:1817187/1‑93 (MQ=255)
ggCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGaa > 1:3697991/1‑93 (MQ=255)
ggCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGaa > 1:869817/1‑93 (MQ=255)
ggCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGaa < 2:5326310/93‑1 (MQ=255)
aTAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATAc > 1:2147713/1‑93 (MQ=255)
aTAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATAc > 1:5675434/1‑93 (MQ=255)
aTAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATAc > 2:1401466/1‑93 (MQ=255)
tAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACt > 2:5806652/1‑93 (MQ=255)
tAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACt < 1:5407245/93‑1 (MQ=255)
|
GCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCA > NC_000913/1689463‑1689641
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCATTTT > NC_000913/1689460‑1689645
|
TACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAG < SRR4302533.2467432/94‑1 (MQ=60)
CGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCG < SRR4302533.5894418/94‑1 (MQ=60)
CGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCG > SRR4302533.5862261/1‑94 (MQ=60)
CGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCG > SRR4302533.5331398/1‑94 (MQ=60)
GCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGC > SRR4302533.2604606/1‑94 (MQ=60)
TTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGC < SRR4302533.3001878/94‑1 (MQ=60)
TTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGC < SRR4302533.3278778/94‑1 (MQ=60)
TCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACT < SRR4302533.2818545/94‑1 (MQ=60)
CAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTT > SRR4302533.2506335/1‑94 (MQ=60)
CAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTT < SRR4302533.4020966/94‑1 (MQ=60)
AGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTT < SRR4302533.2095916/94‑1 (MQ=60)
GCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGT > SRR4302533.5268627/1‑94 (MQ=60)
CCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTC > SRR4302533.5645799/1‑94 (MQ=60)
CCTACCTTTTCCGGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCG‑TTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCA < SRR4302533.1087755/94‑1 (MQ=60)
CTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCA > SRR4302533.2817747/1‑94 (MQ=60)
ACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAAC > SRR4302533.5395718/1‑94 (MQ=60)
TTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAAT < SRR4302533.2532814/94‑1 (MQ=60)
TTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAAT < SRR4302533.1052445/94‑1 (MQ=60)
TTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCT < SRR4302533.5955263/94‑1 (MQ=60)
CCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGA > SRR4302533.4321651/1‑94 (MQ=60)
TGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCTTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAA < SRR4302533.5583821/94‑1 (MQ=60)
TGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAA < SRR4302533.2056239/94‑1 (MQ=60)
TGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAA < SRR4302533.868959/94‑1 (MQ=60)
CAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACG > SRR4302533.1962096/1‑94 (MQ=60)
AACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGC < SRR4302533.1920325/94‑1 (MQ=60)
AACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGC > SRR4302533.5895430/1‑94 (MQ=60)
ACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCC < SRR4302533.6256314/94‑1 (MQ=60)
ACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCC < SRR4302533.2531783/94‑1 (MQ=60)
CACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCG < SRR4302533.6156435/94‑1 (MQ=60)
ACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGG > SRR4302533.3811426/1‑94 (MQ=60)
ACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGG > SRR4302533.5893057/1‑94 (MQ=60)
CTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGGATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGA > SRR4302533.4110981/1‑94 (MQ=60)
CTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGATTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGA > SRR4302533.6308040/1‑94 (MQ=60)
TTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAG < SRR4302533.1166850/94‑1 (MQ=60)
TTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAG < SRR4302533.4650761/94‑1 (MQ=60)
TTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAG > SRR4302533.3679055/1‑94 (MQ=60)
TTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGA > SRR4302533.2548954/1‑94 (MQ=60)
GAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATT < SRR4302533.5660363/94‑1 (MQ=60)
GAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATT < SRR4302533.3643536/94‑1 (MQ=60)
ATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGAACTTTGTCACCAATTTGAAACGCGGGGGATTTT > SRR4302533.4145932/1‑94 (MQ=54)
TATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCT > SRR4302533.5267234/1‑94 (MQ=60)
TATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCT < SRR4302533.1044752/94‑1 (MQ=60)
ATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTC > SRR4302533.6310607/1‑94 (MQ=60)
TTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCG > SRR4302533.1975375/1‑94 (MQ=60)
TGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTT > SRR4302533.4026503/1‑94 (MQ=60)
TAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGCAACGCCGGAGATTTTTCTCTCCGGCGTTAT > SRR4302533.2348858/1‑94 (MQ=60)
AGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATT < SRR4302533.5660255/94‑1 (MQ=60)
AGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATT < SRR4302533.1973256/94‑1 (MQ=60)
CTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTT > SRR4302533.691894/1‑94 (MQ=60)
CTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTT > SRR4302533.1909349/1‑94 (MQ=60)
TGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTT > SRR4302533.1982230/1‑94 (MQ=60)
TGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTT > SRR4302533.1982231/1‑94 (MQ=60)
TGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTT > SRR4302533.4968970/1‑94 (MQ=60)
GATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTAC < SRR4302533.6003553/94‑1 (MQ=60)
ATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACT > SRR4302533.1735051/1‑94 (MQ=60)
ATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACT > SRR4302533.2906263/1‑94 (MQ=60)
ATAAGGCGTTTACGCAGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACT < SRR4302533.3643751/94‑1 (MQ=60)
AAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTC > SRR4302533.4750530/1‑94 (MQ=60)
AAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTC > SRR4302533.1952014/1‑94 (MQ=60)
GGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAG < SRR4302533.1488871/94‑1 (MQ=60)
GTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAT < SRR4302533.2018915/94‑1 (MQ=60)
GTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAT > SRR4302533.4287372/1‑94 (MQ=60)
GTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAT > SRR4302533.1786428/1‑94 (MQ=60)
ACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAG < SRR4302533.4391437/94‑1 (MQ=60)
ACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAG > SRR4302533.2844070/1‑94 (MQ=60)
CGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCAT < SRR4302533.2103812/94‑1 (MQ=60)
CGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCAT < SRR4302533.4818702/94‑1 (MQ=60)
CGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCAT > SRR4302533.390799/1‑94 (MQ=60)
GCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATA > SRR4302533.5013933/1‑94 (MQ=60)
ATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACT > SRR4302533.3082318/1‑94 (MQ=60)
ATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACT > SRR4302533.2099190/1‑94 (MQ=60)
CCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGA > SRR4302533.1224571/1‑94 (MQ=60)
CCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGA > SRR4302533.6153100/1‑94 (MQ=60)
CGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAA > SRR4302533.874923/1‑94 (MQ=60)
CGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAA < SRR4302533.800029/94‑1 (MQ=60)
CGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAA < SRR4302533.1857274/94‑1 (MQ=60)
CGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAA > SRR4302533.4674629/1‑94 (MQ=60)
CGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAA > SRR4302533.3720705/1‑94 (MQ=60)
GGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAAT < SRR4302533.1697259/94‑1 (MQ=60)
CATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATAC > SRR4302533.5709712/1‑94 (MQ=60)
CATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATAC > SRR4302533.2160942/1‑94 (MQ=60)
ATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACT > SRR4302533.5015477/1‑94 (MQ=60)
ATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACT > SRR4302533.2249799/1‑94 (MQ=60)
TAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTC < SRR4302533.5439739/94‑1 (MQ=60)
AAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCA < SRR4302533.5399842/94‑1 (MQ=60)
AAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCATT > SRR4302533.3993168/1‑94 (MQ=60)
AGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCATTTT < SRR4302533.5901409/94‑1 (MQ=60)
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TACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCATTTT > NC_000913/1689460‑1689645
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
