Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,698,875 |
A→G |
V499V (GTA→GTG) |
malX → |
MalX |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,698,875 | 0 | A | G | 100.0%
| 650.8
/ NA
| 200 | V499V (GTA→GTG) | malX | MalX |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (93/107); total (93/107) |
Only 100 of 217 total aligned reads displayed.
AACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTACAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCA > NC_000913/1698786‑1698964
|
aaCTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCaa < 1:795916/93‑1 (MQ=255)
aCTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAAc < 2:245859/93‑1 (MQ=255)
tGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACtt < 2:3163146/93‑1 (MQ=255)
cATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTaa > 2:1549472/1‑93 (MQ=255)
aTTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAAt > 2:4521866/1‑93 (MQ=255)
ttACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATc > 1:4553900/1‑93 (MQ=255)
tcccGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCaa < 1:2062714/92‑1 (MQ=255)
cccGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCaaa > 2:3833085/1‑92 (MQ=255)
cccGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAAc < 2:3110982/93‑1 (MQ=255)
ccGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACa < 2:5928835/93‑1 (MQ=255)
cGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACAt < 1:5411560/93‑1 (MQ=255)
gTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATa < 1:3672567/93‑1 (MQ=255)
gTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATa < 1:727317/93‑1 (MQ=255)
tCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATaa < 1:2058678/93‑1 (MQ=255)
tCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATaa > 2:4090407/1‑93 (MQ=255)
tCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATaa > 1:650981/1‑93 (MQ=255)
cTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAAc > 1:5723671/1‑93 (MQ=255)
tGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAAcc > 2:5453292/1‑93 (MQ=255)
tGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAAcc < 2:754502/93‑1 (MQ=255)
gCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCt < 2:4226775/93‑1 (MQ=255)
cGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTg > 2:139651/1‑93 (MQ=255)
gTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGc < 2:4800252/93‑1 (MQ=255)
gTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGc > 1:2844002/1‑93 (MQ=255)
gTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGc > 1:2819783/1‑93 (MQ=255)
ttGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAg > 1:3902513/1‑93 (MQ=255)
ttGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAg < 2:2183720/93‑1 (MQ=255)
tGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAgg < 1:3937061/93‑1 (MQ=255)
cTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGgttg > 2:1790479/1‑93 (MQ=255)
gAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTAt < 1:3250697/93‑1 (MQ=255)
gaaGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATc < 2:2331136/92‑1 (MQ=255)
aaaGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATc > 2:2480307/1‑93 (MQ=255)
aaGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCg < 2:1978575/93‑1 (MQ=255)
atatGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGc > 1:3317161/1‑93 (MQ=255)
atatGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGc < 2:3317140/93‑1 (MQ=255)
tatGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGcc < 1:43196/93‑1 (MQ=255)
tatGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGcc < 1:1925792/93‑1 (MQ=255)
gTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCcaca > 1:3182725/1‑93 (MQ=255)
tCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACaa < 2:288224/93‑1 (MQ=255)
cGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAg < 2:3606133/93‑1 (MQ=255)
cgtGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGtt < 2:4705852/91‑1 (MQ=255)
cTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGtt > 2:4056050/1‑93 (MQ=255)
ttGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtc < 2:2973185/93‑1 (MQ=255)
ttGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtc > 1:1057926/1‑93 (MQ=255)
gTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcag < 2:1120851/93‑1 (MQ=255)
ttAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagt > 2:4944531/1‑93 (MQ=255)
ttAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagt > 1:2637004/1‑93 (MQ=255)
ttAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagt > 1:1799929/1‑93 (MQ=255)
aaTGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagtca > 1:6288731/1‑93 (MQ=255)
aaTGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagtca < 1:937437/93‑1 (MQ=255)
aaTGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagtca < 2:1848839/93‑1 (MQ=255)
aaTGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagtca > 1:1203715/1‑93 (MQ=255)
tgtgCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTcagtcagt < 1:566368/93‑1 (MQ=255)
tgtgCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTcagtcagt > 2:1007637/1‑93 (MQ=255)
tgCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTaa < 2:3971471/93‑1 (MQ=255)
tgCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTaa < 2:1893857/93‑1 (MQ=255)
gCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTaaa > 1:5094567/1‑93 (MQ=255)
cAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTaaaa > 2:2693547/1‑93 (MQ=255)
aGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCGGTCAGTAGAAg > 1:5501792/1‑93 (MQ=255)
ggCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGa < 2:5370616/93‑1 (MQ=255)
aCTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATACCCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGa < 2:2611638/93‑1 (MQ=255)
aCTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATAAACATAACCTGCAGGTTGTTATCGGGCAACAAGTTCAGTCAGTAAAAGATGa > 2:1833807/1‑93 (MQ=255)
tGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGaaa > 2:4827010/1‑93 (MQ=255)
tGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGaaa < 1:173052/93‑1 (MQ=255)
gagggACAATCGGGCAATTGGCGTAGTGCAACTTAATGAACATAACCTGCAGGTTGGTATCGGGCCTCAAGTTCAGTCAGTAAAAGATGAAAt < 1:428266/90‑1 (MQ=255)
gAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAAt > 2:517851/1‑93 (MQ=255)
gAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAAt < 1:595374/93‑1 (MQ=255)
gAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAAt > 1:4975057/1‑93 (MQ=255)
aaGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATg < 2:2296534/93‑1 (MQ=255)
aaGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATg < 2:4405804/93‑1 (MQ=255)
aaGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATg < 1:464720/93‑1 (MQ=255)
aaGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATg < 1:2290622/93‑1 (MQ=255)
aaGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATg > 2:1435406/1‑93 (MQ=255)
aGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATgg < 1:4121386/93‑1 (MQ=255)
aGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATgg < 1:419423/93‑1 (MQ=255)
aGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATgg < 2:3273918/93‑1 (MQ=255)
gACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGcc < 2:2392666/93‑1 (MQ=255)
aCAATCGGGCAAGTGGCGTAGTGCAACTTAATCAACATAACGTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCg < 1:1902609/93‑1 (MQ=255)
cAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCgg < 1:1269347/93‑1 (MQ=255)
aTCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTc > 1:3619329/1‑93 (MQ=255)
tCGTGCAGTTGGCGTAGTGCAACTTAATCAACATAACCTGCAGTGTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCt < 1:1157360/93‑1 (MQ=255)
tCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCt > 1:2752344/1‑93 (MQ=255)
cGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTg > 2:5618115/1‑93 (MQ=255)
gggCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGa < 2:4178351/93‑1 (MQ=255)
ggCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGAt < 2:875189/93‑1 (MQ=255)
cAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGc < 2:5769500/93‑1 (MQ=255)
aaTTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCa > 2:4639123/1‑93 (MQ=255)
aTTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCAt > 1:2925555/1‑93 (MQ=255)
aTTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCACTCAGTAAAAGATGAAATGGCCGGTCTGATGCAt > 1:6105904/1‑93 (MQ=255)
ttGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATa < 1:4793043/93‑1 (MQ=255)
ttGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATa > 1:1591324/1‑93 (MQ=255)
ttGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATa > 2:677939/1‑93 (MQ=255)
ttGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATa > 1:1362902/1‑93 (MQ=255)
ggCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACATGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACt < 1:4429284/93‑1 (MQ=255)
gtagtgCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTc < 1:751169/93‑1 (MQ=255)
gtagtgCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTc > 2:4972980/1‑93 (MQ=255)
tagtgCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTcc < 1:2582915/93‑1 (MQ=255)
tagtgCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTcc < 2:2844002/93‑1 (MQ=255)
tagtgCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTcc < 2:6029003/93‑1 (MQ=255)
agtgCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTGCa > 2:3082307/1‑93 (MQ=255)
agtgCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCa < 2:828402/93‑1 (MQ=255)
|
AACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTACAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCA > NC_000913/1698786‑1698964
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGATAACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTACAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCAGGC > NC_000913/1698782‑1698967
|
CGATAACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTG > SRR4302533.4248675/1‑94 (MQ=60)
AACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAAC < SRR4302533.800598/94‑1 (MQ=60)
ACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACT < SRR4302533.5656334/94‑1 (MQ=60)
GCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGTAATTGGCGTAGTGCAACTTAA < SRR4302533.2072993/94‑1 (MQ=60)
CATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAAT < SRR4302533.2386941/94‑1 (MQ=60)
CATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAAT > SRR4302533.1207706/1‑94 (MQ=60)
ATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATC > SRR4302533.4581519/1‑94 (MQ=60)
ATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATC > SRR4302533.3939082/1‑94 (MQ=60)
TCCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAAC < SRR4302533.2075432/94‑1 (MQ=60)
ACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAAC > SRR4302533.710912/1‑94 (MQ=60)
CCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACA > SRR4302533.2113626/1‑94 (MQ=60)
CCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACA < SRR4302533.570960/94‑1 (MQ=60)
CCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACA > SRR4302533.1387317/1‑94 (MQ=60)
CCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACA < SRR4302533.3260783/94‑1 (MQ=60)
CCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACAT > SRR4302533.6341154/1‑94 (MQ=60)
CCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACAT < SRR4302533.5132839/94‑1 (MQ=60)
CGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATA < SRR4302533.5444097/94‑1 (MQ=60)
GTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAA > SRR4302533.654830/1‑94 (MQ=60)
GTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAA < SRR4302533.3695136/94‑1 (MQ=60)
GTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAA > SRR4302533.1920929/1‑94 (MQ=60)
GTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAA < SRR4302533.731614/94‑1 (MQ=60)
GTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAA > SRR4302533.433202/1‑94 (MQ=60)
TCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAAC < SRR4302533.2071370/94‑1 (MQ=60)
TCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAAC > SRR4302533.5758227/1‑94 (MQ=60)
CGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGC > SRR4302533.2861505/1‑94 (MQ=60)
CGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGC > SRR4302533.2837134/1‑94 (MQ=60)
GTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCA > SRR4302533.1134676/1‑94 (MQ=60)
TTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAG > SRR4302533.3926345/1‑94 (MQ=60)
TTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGG < SRR4302533.981649/94‑1 (MQ=60)
TGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGT < SRR4302533.3961093/94‑1 (MQ=60)
TGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGT > SRR4302533.2213498/1‑94 (MQ=60)
GTCTGTGAAAGATATCTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTT < SRR4302533.736835/94‑1 (MQ=60)
CTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGT < SRR4302533.281412/94‑1 (MQ=60)
GTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTA > SRR4302533.1280930/1‑94 (MQ=60)
TGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGATGTTAT > SRR4302533.4832424/1‑94 (MQ=60)
GAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTACTCAACATAACCTGCAGGTTGTTATC > SRR4302533.4362732/1‑94 (MQ=60)
GAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATC < SRR4302533.3270742/94‑1 (MQ=60)
GAAAGATATGTCGCTTGTTAAGGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATC < SRR4302533.2645838/94‑1 (MQ=60)
GATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGC > SRR4302533.3337646/1‑94 (MQ=60)
GATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGC < SRR4302533.1253601/94‑1 (MQ=60)
TATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCA < SRR4302533.43491/94‑1 (MQ=60)
TATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCA < SRR4302533.1937540/94‑1 (MQ=60)
TGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACA > SRR4302533.3202307/1‑94 (MQ=60)
GTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAA < SRR4302533.6157399/94‑1 (MQ=60)
GTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAA < SRR4302533.855908/94‑1 (MQ=60)
GTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAA < SRR4302533.1662966/94‑1 (MQ=60)
CGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGT > SRR4302533.5217703/1‑94 (MQ=60)
CGCTTGTCAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGT > SRR4302533.4151328/1‑94 (MQ=60)
GCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTT > SRR4302533.3804974/1‑94 (MQ=60)
CTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTC > SRR4302533.3856973/1‑94 (MQ=60)
CTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTC > SRR4302533.1064150/1‑94 (MQ=60)
CTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTC < SRR4302533.1661125/94‑1 (MQ=60)
TGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAG > SRR4302533.4702092/1‑94 (MQ=60)
GTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGT > SRR4302533.2653213/1‑94 (MQ=60)
GTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGT > SRR4302533.1810879/1‑94 (MQ=60)
TAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCA > SRR4302533.1210948/1‑94 (MQ=60)
TAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCA > SRR4302533.6326243/1‑94 (MQ=60)
AATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAG < SRR4302533.942944/94‑1 (MQ=60)
TGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTA < SRR4302533.569722/94‑1 (MQ=60)
TGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAA > SRR4302533.5125343/1‑94 (MQ=60)
CAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCGGTCAGTAGAAG > SRR4302533.5534985/1‑94 (MQ=60)
AGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGA > SRR4302533.1001445/1‑94 (MQ=60)
GGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGAT < SRR4302533.1747300/94‑1 (MQ=60)
GCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATG < SRR4302533.2876309/94‑1 (MQ=60)
GCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATG < SRR4302533.4532238/94‑1 (MQ=60)
GCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATA > SRR4302533.1941694/1‑94 (MQ=60)
ACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAA < SRR4302533.3961870/94‑1 (MQ=60)
TGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAAT < SRR4302533.174144/94‑1 (MQ=60)
TGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAAT < SRR4302533.5066346/94‑1 (MQ=60)
TGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAAT > SRR4302533.5005221/1‑94 (MQ=60)
GAGGGACAATCGGGCAATTGGCGTAGTGCAACTTAATGAACATAACCTGCAGGTTGGTATCGGGCCTCAAGTTCAGTCAGTAAAAGATGAAATG < SRR4302533.430820/94‑1 (MQ=60)
GAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATG < SRR4302533.598885/94‑1 (MQ=60)
AAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGG < SRR4302533.2304808/94‑1 (MQ=60)
AAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGG < SRR4302533.467495/94‑1 (MQ=60)
AGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGC < SRR4302533.4146409/94‑1 (MQ=60)
AGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGC < SRR4302533.421937/94‑1 (MQ=60)
GGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCC < SRR4302533.6322176/94‑1 (MQ=60)
GGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCC < SRR4302533.2861063/94‑1 (MQ=60)
ACAATCGGGCAAGTGGCGTAGTGCAACTTAATCAACATAACGTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGG < SRR4302533.1914221/94‑1 (MQ=60)
CAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAGTGGCCGGT > SRR4302533.2696383/1‑94 (MQ=60)
CAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGT < SRR4302533.1276944/94‑1 (MQ=60)
AATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTC > SRR4302533.3641595/1‑94 (MQ=60)
AATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTC > SRR4302533.782442/1‑94 (MQ=60)
ATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCT > SRR4302533.2769222/1‑94 (MQ=60)
ATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCT < SRR4302533.5815587/94‑1 (MQ=60)
ATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCT > SRR4302533.2876909/1‑94 (MQ=60)
TCGTGCAGTTGGCGTAGTGCAACTTAATCAACATAACCTGCAGTGTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTG < SRR4302533.1164304/94‑1 (MQ=60)
GGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATG < SRR4302533.3110907/94‑1 (MQ=60)
GCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGC > SRR4302533.5505241/1‑94 (MQ=60)
GCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGC < SRR4302533.3316981/94‑1 (MQ=60)
CAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCA > SRR4302533.4289585/1‑94 (MQ=60)
AATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCAT > SRR4302533.2943458/1‑94 (MQ=60)
AATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCAT < SRR4302533.4374792/94‑1 (MQ=60)
AATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCAT < SRR4302533.3676200/94‑1 (MQ=60)
AATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCACTCAGTAAAAGATGAAATGGCCGGTCTGATGCAT > SRR4302533.6142774/1‑94 (MQ=60)
ATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATA > SRR4302533.1600950/1‑94 (MQ=60)
ATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATA < SRR4302533.6007968/94‑1 (MQ=60)
ATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATA > SRR4302533.1371089/1‑94 (MQ=60)
TTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATAC < SRR4302533.3511930/94‑1 (MQ=60)
TTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATAC < SRR4302533.4822083/94‑1 (MQ=60)
GGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACATGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTG < SRR4302533.4456060/94‑1 (MQ=60)
GTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCC < SRR4302533.755595/94‑1 (MQ=60)
TAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCA > SRR4302533.1843761/1‑94 (MQ=60)
TAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCA < SRR4302533.2598798/94‑1 (MQ=60)
AGTGCACCTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCAG < SRR4302533.4606780/94‑1 (MQ=60)
GTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCAGG < SRR4302533.6281293/94‑1 (MQ=60)
TGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCAGGC > SRR4302533.4526553/1‑94 (MQ=60)
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CGATAACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTACAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCAGGC > NC_000913/1698782‑1698967
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
