Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,701,951 |
T→C |
S128G (AGC→GGC) |
b1624 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,701,951 | 0 | T | C | 100.0%
| 695.4
/ NA
| 216 | S128G (AGC→GGC) | b1624 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (125/91); total (125/91) |
Only 100 of 220 total aligned reads displayed.
GCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCTATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGG > NC_000913/1701861‑1702040
|
gCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCAt > 2:4060298/1‑93 (MQ=255)
cggacggaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATc < 2:1572179/93‑1 (MQ=255)
ggacggaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATcc > 2:2702993/1‑93 (MQ=255)
acggaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCa < 2:3622625/93‑1 (MQ=255)
acggaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCa < 2:4365048/93‑1 (MQ=255)
cggaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAg < 2:3061288/93‑1 (MQ=255)
cggaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAg < 2:6135034/93‑1 (MQ=255)
ggaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGc > 2:5817372/1‑93 (MQ=255)
gaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCg > 2:4107294/1‑93 (MQ=255)
aaGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGa > 2:5168302/1‑93 (MQ=255)
aaGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGa < 1:1083538/93‑1 (MQ=255)
aGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGAc > 1:2138289/1‑93 (MQ=255)
aGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGAc < 1:1645965/93‑1 (MQ=255)
gCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACg < 2:3693661/93‑1 (MQ=255)
ggTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGt < 1:1434524/93‑1 (MQ=255)
gTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGAGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACgggt > 1:644352/1‑91 (MQ=255)
cAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTAt > 1:347102/1‑93 (MQ=255)
aaaTGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATgg > 1:5199800/1‑93 (MQ=255)
aTGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGaa > 1:1029806/1‑93 (MQ=255)
gagaCTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATa < 2:6195923/93‑1 (MQ=255)
gaCTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATaca < 2:2823225/93‑1 (MQ=255)
gaCTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATaca > 1:4128327/1‑93 (MQ=255)
aCTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacag < 2:4558557/93‑1 (MQ=255)
aCTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacag < 1:1554590/93‑1 (MQ=255)
aCTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacag < 2:1477858/93‑1 (MQ=255)
cTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacaga < 2:1903283/93‑1 (MQ=255)
cTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacaga > 1:4942424/1‑93 (MQ=255)
tCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacagac > 2:360905/1‑93 (MQ=255)
cAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacagaca > 1:531064/1‑93 (MQ=255)
aaGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGc < 1:235322/93‑1 (MQ=255)
tAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGcaca < 2:2756125/93‑1 (MQ=255)
tAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGcaca > 2:1998978/1‑93 (MQ=255)
aaGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCacac < 1:933878/93‑1 (MQ=255)
aGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACg > 2:2205588/1‑93 (MQ=255)
aaCTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGccc < 1:669796/93‑1 (MQ=255)
aCTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGcccc > 2:5609717/1‑93 (MQ=255)
aCTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGcccc > 1:3940853/1‑93 (MQ=255)
cTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCa > 2:2429679/1‑93 (MQ=255)
ttCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAg < 2:620657/93‑1 (MQ=255)
ttCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAg < 1:69924/93‑1 (MQ=255)
tCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAgg < 2:1988831/93‑1 (MQ=255)
cccAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCtt > 2:419576/1‑93 (MQ=255)
cccAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCtt > 2:5955542/1‑93 (MQ=255)
ccAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCttt > 1:2625841/1‑93 (MQ=255)
cAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCtttt > 1:4910851/1‑93 (MQ=255)
cAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCtttt > 1:1708559/1‑93 (MQ=255)
cAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCtttt > 1:2852593/1‑93 (MQ=255)
gCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTg > 1:2242944/1‑93 (MQ=255)
cACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGc < 2:1253867/93‑1 (MQ=255)
aCGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGcc > 2:1675346/1‑93 (MQ=255)
gCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAg > 1:3324287/1‑93 (MQ=255)
ccTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAgc > 1:5915366/1‑93 (MQ=255)
ccTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAgc < 1:5972795/93‑1 (MQ=255)
cTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAgcg > 2:3208317/1‑93 (MQ=255)
ttCCGCGAGTAAACCTTTTAGCGTCAGGAAATCCCCATCCCAGCGCCGGTTTTGGATTACAACAAGACCACGCCCCAGGCTTTTTCCAAgcca > 2:3834930/1‑91 (MQ=255)
ttCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAgcgc > 1:752301/1‑93 (MQ=255)
ttCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAgcgc > 2:480857/1‑93 (MQ=255)
cgcgAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATc < 2:6260716/93‑1 (MQ=255)
gcgAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATcc > 1:4387865/1‑93 (MQ=255)
gcgAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATcc < 1:3913031/93‑1 (MQ=255)
cgAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCa > 1:4013011/1‑93 (MQ=255)
cgAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCa > 1:466681/1‑93 (MQ=255)
cgAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCa < 1:5979172/93‑1 (MQ=255)
aGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGCCGGTTATGGAATACAGCCAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGc < 1:34948/93‑1 (MQ=255)
tAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGctc > 1:2145587/1‑93 (MQ=255)
tAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGctc > 2:2133508/1‑93 (MQ=255)
aaaCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGctct > 2:3976893/1‑93 (MQ=255)
aaCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCtctc < 2:5040268/93‑1 (MQ=255)
aaCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCtctc < 2:4646917/93‑1 (MQ=255)
aaCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCtctc > 1:6242643/1‑93 (MQ=255)
aaCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCtctc < 1:2455285/93‑1 (MQ=255)
aaCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCtctc > 1:1247747/1‑93 (MQ=255)
aCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTcg < 2:5472083/93‑1 (MQ=255)
aCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTcg < 2:1223500/93‑1 (MQ=255)
aCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTcg > 1:2509722/1‑93 (MQ=255)
aCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTcg > 1:2293308/1‑93 (MQ=255)
ccTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTcgc < 2:3798435/93‑1 (MQ=255)
ttttAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCgcgc > 2:427558/1‑93 (MQ=255)
tAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTtg < 1:5767498/93‑1 (MQ=255)
tAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTtg > 1:1011424/1‑93 (MQ=255)
aGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTtgt > 2:1734885/1‑93 (MQ=255)
aGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTtgt > 1:3775018/1‑93 (MQ=255)
gCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTtgtg > 2:2290815/1‑93 (MQ=255)
gCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTtgtg < 1:5134338/93‑1 (MQ=255)
cGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGa > 2:2525160/1‑93 (MQ=255)
gTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGAc < 2:4306211/93‑1 (MQ=255)
gTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGAc > 1:2974500/1‑93 (MQ=255)
gTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGAc < 1:199005/93‑1 (MQ=255)
gTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGAc > 1:4254550/1‑93 (MQ=255)
tCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACa > 2:3881248/1‑93 (MQ=255)
tCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACa > 1:1325697/1‑93 (MQ=255)
tCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACa > 2:4962215/1‑93 (MQ=255)
cAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAg < 1:3697584/93‑1 (MQ=255)
aaGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAgt > 1:190271/1‑93 (MQ=255)
aaGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAgt > 1:323892/1‑93 (MQ=255)
aaGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAgt > 2:4345672/1‑93 (MQ=255)
aTCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCAc > 2:5389370/1‑93 (MQ=255)
aTCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCAc > 1:507362/1‑93 (MQ=255)
tCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACg < 1:4420611/93‑1 (MQ=255)
cGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACgg < 2:2658789/93‑1 (MQ=255)
|
GCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCTATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGG > NC_000913/1701861‑1702040
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCTGCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCTATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGGTAA > NC_000913/1701858‑1702043
|
CCTGCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCC < SRR4302533.5086436/94‑1 (MQ=60)
CTGCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCA < SRR4302533.6138963/94‑1 (MQ=60)
TGCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCAT < SRR4302533.4888746/94‑1 (MQ=60)
GCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATC > SRR4302533.4271588/1‑94 (MQ=60)
CGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCC < SRR4302533.151339/94‑1 (MQ=60)
GGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCC > SRR4302533.1069913/1‑94 (MQ=60)
GAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGA > SRR4302533.1726755/1‑94 (MQ=60)
AAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGAC > SRR4302533.2151473/1‑94 (MQ=60)
AAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGAC > SRR4302533.4469626/1‑94 (MQ=60)
AAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGAC > SRR4302533.4078061/1‑94 (MQ=60)
AAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGAC > SRR4302533.357178/1‑94 (MQ=60)
AAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGAC < SRR4302533.1089928/94‑1 (MQ=60)
AAGCGGTCAAAATGAGACACAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGAC < SRR4302533.6336999/94‑1 (MQ=60)
AGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACG > SRR4302533.601123/1‑94 (MQ=60)
AGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACG < SRR4302533.1655930/94‑1 (MQ=60)
AGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACG < SRR4302533.4146704/94‑1 (MQ=60)
GGTCAAAATGAGACTCAAAGTAAGCAGCTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTT < SRR4302533.222394/94‑1 (MQ=60)
GGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTT > SRR4302533.6220598/1‑94 (MQ=60)
GGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTT < SRR4302533.1443185/94‑1 (MQ=60)
GGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTT < SRR4302533.4721830/94‑1 (MQ=60)
GGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTT < SRR4302533.2988939/94‑1 (MQ=60)
GGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGAGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGGT > SRR4302533.648146/1‑94 (MQ=60)
GTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTA > SRR4302533.732172/1‑94 (MQ=60)
TCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTAT > SRR4302533.349221/1‑94 (MQ=60)
TCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTAT > SRR4302533.2923328/1‑94 (MQ=60)
AAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGG > SRR4302533.5231148/1‑94 (MQ=60)
AAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGA < SRR4302533.5985190/94‑1 (MQ=60)
AATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAA > SRR4302533.1035859/1‑94 (MQ=60)
ATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAAT > SRR4302533.2539108/1‑94 (MQ=60)
AGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACA < SRR4302533.2336822/94‑1 (MQ=60)
AGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACA > SRR4302533.4153385/1‑94 (MQ=60)
GACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAG < SRR4302533.1920077/94‑1 (MQ=60)
ACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGA > SRR4302533.4972341/1‑94 (MQ=60)
ACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGA < SRR4302533.1563950/94‑1 (MQ=60)
CTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGAC < SRR4302533.810687/94‑1 (MQ=60)
TCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACA > SRR4302533.534222/1‑94 (MQ=60)
AAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCA < SRR4302533.236771/94‑1 (MQ=60)
AAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCA > SRR4302533.236050/1‑94 (MQ=60)
AAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCA < SRR4302533.2265032/94‑1 (MQ=60)
GTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACA < SRR4302533.2521120/94‑1 (MQ=60)
GTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACA > SRR4302533.3911928/1‑94 (MQ=60)
GTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACA > SRR4302533.2158015/1‑94 (MQ=60)
AAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACG > SRR4302533.5087024/1‑94 (MQ=60)
AAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACG < SRR4302533.939356/94‑1 (MQ=60)
CAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCC < SRR4302533.1027059/94‑1 (MQ=60)
AACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCC > SRR4302533.4293513/1‑94 (MQ=60)
AACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCC > SRR4302533.3964901/1‑94 (MQ=60)
AACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCC < SRR4302533.673755/94‑1 (MQ=60)
CTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAG > SRR4302533.3441099/1‑94 (MQ=60)
CTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAG > SRR4302533.2759165/1‑94 (MQ=60)
TTCACCCAGCACGCCTTCCGCGAGTAACCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGG < SRR4302533.3292037/94‑1 (MQ=60)
TTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGG < SRR4302533.70379/94‑1 (MQ=60)
TCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGC < SRR4302533.701024/94‑1 (MQ=60)
CACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCT < SRR4302533.4852075/94‑1 (MQ=60)
ACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTT > SRR4302533.5453022/1‑94 (MQ=60)
CCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTT > SRR4302533.1669882/1‑94 (MQ=60)
CCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTT > SRR4302533.2641953/1‑94 (MQ=60)
CCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTT > SRR4302533.2870139/1‑94 (MQ=60)
CCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTT > SRR4302533.1718911/1‑94 (MQ=60)
CCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTT > SRR4302533.5261774/1‑94 (MQ=60)
CCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTT > SRR4302533.4940602/1‑94 (MQ=60)
CAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTT < SRR4302533.3722859/94‑1 (MQ=60)
CAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTT > SRR4302533.5911236/1‑94 (MQ=60)
AGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTG > SRR4302533.2256808/1‑94 (MQ=60)
AGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTG > SRR4302533.140261/1‑94 (MQ=60)
CACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCC > SRR4302533.4969793/1‑94 (MQ=60)
ACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCA > SRR4302533.5225334/1‑94 (MQ=60)
ACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCA > SRR4302533.2447703/1‑94 (MQ=60)
CGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAG > SRR4302533.3344821/1‑94 (MQ=60)
GCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGC > SRR4302533.5951114/1‑94 (MQ=60)
CCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCG < SRR4302533.6008947/94‑1 (MQ=60)
CTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGC > SRR4302533.756735/1‑94 (MQ=60)
CCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATC < SRR4302533.3613356/94‑1 (MQ=60)
CGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCC > SRR4302533.4414355/1‑94 (MQ=60)
GCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCA < SRR4302533.3936928/94‑1 (MQ=60)
GCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCA < SRR4302533.3511935/94‑1 (MQ=60)
GCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCA > SRR4302533.469469/1‑94 (MQ=60)
GCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCA > SRR4302533.4037444/1‑94 (MQ=60)
CGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAG < SRR4302533.6015386/94‑1 (MQ=60)
AGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGCCGGTTATGGAATACAGCCAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCT < SRR4302533.35184/94‑1 (MQ=60)
AGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCT > SRR4302533.5243655/1‑94 (MQ=60)
AGTAAACCGTTTAGCGTCAAGAAAGCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCT < SRR4302533.1651525/94‑1 (MQ=60)
GTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTC < SRR4302533.515044/94‑1 (MQ=60)
GTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTC > SRR4302533.3941176/1‑94 (MQ=60)
GTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTC > SRR4302533.2158801/1‑94 (MQ=60)
AAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTC > SRR4302533.6280014/1‑94 (MQ=60)
AAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTC > SRR4302533.1255199/1‑94 (MQ=60)
AAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTC > SRR4302533.4017279/1‑94 (MQ=60)
AACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCG > SRR4302533.2307505/1‑94 (MQ=60)
AACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCG < SRR4302533.2470437/94‑1 (MQ=60)
AACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCG > SRR4302533.2525185/1‑94 (MQ=60)
ACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGC > SRR4302533.6079730/1‑94 (MQ=60)
CCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCCCACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCG < SRR4302533.131629/94‑1 (MQ=60)
TTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTG > SRR4302533.1017343/1‑94 (MQ=60)
TAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGT < SRR4302533.5802315/94‑1 (MQ=60)
TAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGT > SRR4302533.3798159/1‑94 (MQ=60)
GCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGA < SRR4302533.5165358/94‑1 (MQ=60)
CGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGAC > SRR4302533.2992700/1‑94 (MQ=60)
CGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGAC > SRR4302533.4280205/1‑94 (MQ=60)
GTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACA < SRR4302533.200264/94‑1 (MQ=60)
GTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACA > SRR4302533.1439642/1‑94 (MQ=60)
GTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACA > SRR4302533.1333648/1‑94 (MQ=60)
CAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGT > SRR4302533.2124466/1‑94 (MQ=60)
CAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGT > SRR4302533.191464/1‑94 (MQ=60)
CAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGT > SRR4302533.325868/1‑94 (MQ=60)
CAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGT < SRR4302533.3720296/94‑1 (MQ=60)
AGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGT > SRR4302533.1113815/1‑94 (MQ=60)
GAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTC < SRR4302533.1919574/94‑1 (MQ=60)
AATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCAC > SRR4302533.510374/1‑94 (MQ=60)
AATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCAC > SRR4302533.3047577/1‑94 (MQ=60)
ATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACG < SRR4302533.653569/94‑1 (MQ=60)
TCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGG < SRR4302533.4441837/94‑1 (MQ=60)
TCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGG < SRR4302533.4447339/94‑1 (MQ=60)
CGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGGT > SRR4302533.790519/1‑94 (MQ=60)
CGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGGT < SRR4302533.927062/94‑1 (MQ=60)
GCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGGTA < SRR4302533.2360346/94‑1 (MQ=60)
GCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGGTA > SRR4302533.2589139/1‑94 (MQ=60)
CCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGGTAA > SRR4302533.4696699/1‑94 (MQ=60)
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CCTGCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCTATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGGTAA > NC_000913/1701858‑1702043
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
